Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-4c15.18

Gene Name Gene ID Reads Annotation
si:dkey-4c15.18 si:dkey-4c15.18 54










Genes with expression patterns similar to si:dkey-4c15.18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-4c15.18 si:dkey-4c15.18 54 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. FGD5_1 FGD5_1 8 2.38 - 0.796 0.852 - - 0.732 - - -
3. ANKRD34A 22 1.874 - - - - 0.874 - 1.000 - - ankyrin repeat domain 34A, transcript variant X2
4. RNF122 RNF122 29 1.796 - 0.796 - - - - 1.000 - -
5. nbn ENSDARG00000040303 43 1.763 - 0.903 - - - - 0.860 - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
6. RDM1 RDM1 28 1.748 - 0.748 - - - - 1.000 - -
7. CR354540.1 ENSDARG00000004051 10 1.74 - - - - 0.740 - 1.000 - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
8. BX537350.1 BX537350.1 8 1.732 - - - - - 0.732 1.000 - -
9. mfsd6l ENSDARG00000014761 60 1.732 - - - - - 0.732 1.000 - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
10. BX323882.1 ENSDARG00000101656 2 1.732 - - - - - 0.732 1.000 - - butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
11. taar20t ENSDARG00000095035 1 1.732 - - - - - 0.732 1.000 - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
12. PEG3_10 PEG3_10 45 1.725 - - 0.725 - - - 1.000 - -
13. si:ch211-274p24.4 ENSDARG00000087088 36 1.689 - - - - - 0.845 0.844 - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
14. slc10a2 ENSDARG00000014916, ENSDARG00000112112 20 1.64 - - - - 0.881 - 0.759 - - solute carrier family 10 (sodium/bile acid cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1328]
15. pik3r5 ENSDARG00000102762 56 1.64 - 0.796 - - - 0.844 - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
16. cyb561 ENSDARG00000038176 55 1.617 - 0.741 - - - - 0.876 - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
17. PTPDC1_1 PTPDC1_1 12 1.602 - - - 0.756 0.846 - - - -
18. irak1bp1 ENSDARG00000036903, ENSDARG00000110205 426 1.542 - - 0.720 - - - 0.822 - - interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-272]
19. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1.531 - 0.824 0.707 - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
20. mtcl1 ENSDARG00000091408 6 1.528 - 0.796 - - - 0.732 - - - microtubule crosslinking factor 1 [Source:ZFIN;Acc:ZDB-GENE-120508-3]
21. zgc:158446 36 1.512 - 0.796 - - - - 0.716 - - zgc:158446
22. zgc:112977 ENSDARG00000071741 109 1.495 - 0.753 - - - 0.742 - - - zgc:112977 [Source:ZFIN;Acc:ZDB-GENE-050327-98]
23. si:dkey-225h23.4 si:dkey-225h23.4 7 1.493 - - - 0.734 - - 0.759 - -
24. rtn4rl1b ENSDARG00000098528 31 1.472 - 0.740 - - - 0.732 - - - reticulon 4 receptor-like 1b [Source:ZFIN;Acc:ZDB-GENE-040310-3]
25. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1 - - - - - - 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
26. fam154b fam154b 2 1 - - - - - - 1.000 - -
27. ccdc147 ccdc147 39 1 - - - - - - 1.000 - -
28. TULP1 TULP1 50 1 - - - - - - 1.000 - -
29. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
30. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
31. ENSDARG00000029117 ENSDARG00000029117 80 1 - - - - - - 1.000 - -
32. st6galnac1.2 ENSDARG00000043816 51 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
33. RBBP6_10 RBBP6_10 0 1 - - - - - - 1.000 - -
34. mettl8 ENSDARG00000017359 36 1 - - - - - - 1.000 - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
35. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - - - - - - 1.000 - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
36. cacng7a ENSDARG00000063006 2 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 7a [Source:ZFIN;Acc:ZDB-GENE-060503-814]
37. si:dkey-5i3.5 ENSDARG00000058345, ENSDARG00000110584 60 1 - - - - - 1.000 - - - si:dkey-5i3.5 [Source:ZFIN;Acc:ZDB-GENE-070424-162]
38. CR848029.1 CR848029.1 1 1 - - - - - - 1.000 - -
39. dnm2a ENSDARG00000069937 32 1 - - - - - 1.000 - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
40. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
41. abcc12 ENSDARG00000013050 27 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 12 [Source:ZFIN;Acc:ZDB-GENE-050517-25]
42. cul4a ENSDARG00000096578 14 1 - - - - - - 1.000 - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
43. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - - 1.000 - -
44. sema3h ENSDARG00000042616 75 1 - - - - - - 1.000 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
45. tet1 ENSDARG00000075230, ENSDARG00000110764 8 1 - - - - - - 1.000 - - tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
46. HEXDC ENSDARG00000061216, ENSDARG00000116903 83 1 - - - - - - 1.000 - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:ZFIN;Acc:ZDB-GENE-060929-448]
47. def8 ENSDARG00000068208 50 1 - - - - - - 1.000 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
48. zgc:171704 ENSDARG00000018048 14 1 - - - - - - 1.000 - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
49. pde6b ENSDARG00000011671 44 1 - - - - - - 1.000 - - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
50. reep6 ENSDARG00000087349 0 1 - - - - - - 1.000 - - receptor accessory protein 6 [Source:ZFIN;Acc:ZDB-GENE-040912-98]
51. agxta ENSDARG00000052099 65 1 - - - - - - 1.000 - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
52. taar14l ENSDARG00000069213 11 1 - - - - - - 1.000 - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
53. CACNA1E 18 1 - - - - - - 1.000 - - calcium voltage-gated channel subunit alpha1 E, transcript variant X6
54. si:ch211-274p24.2 ENSDARG00000095185 92 1 - - - - - - 1.000 - - si:ch211-274p24.2 [Source:ZFIN;Acc:ZDB-GENE-050309-265]
55. tbx21 ENSDARG00000004473, ENSDARG00000115643 30 1 - - - - - - 1.000 - - T-box 21 [Source:ZFIN;Acc:ZDB-GENE-080104-3]
56. si:dkey-272j9.1 si:dkey-272j9.1 10 1 - - - - - - 1.000 - -
57. zgc:113426 ENSDARG00000051793 37 1 - - - - - - 1.000 - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
58. lsm14b ENSDARG00000025386 23 1 - - - - - - 1.000 - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
59. zgc:92249 14 1 - - - - - - 1.000 - - zgc:92249
60. mthfsd ENSDARG00000062042 34 1 - - - - - - 1.000 - - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
61. zgc:194551 ENSDARG00000114948, ENSDARG00000115221 24 1 - - - - - - 1.000 - - zgc:194551 [Source:ZFIN;Acc:ZDB-GENE-030131-4878]
62. slc7a9 ENSDARG00000005894 29 1 - - - - - - 1.000 - - solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:ZFIN;Acc:ZDB-GENE-080116-2]
63. lim2.2 ENSDARG00000059015 11 1 - - - - - - 1.000 - - lens intrinsic membrane protein 2.2 [Source:ZFIN;Acc:ZDB-GENE-060124-1]
64. ak7b ENSDARG00000017023 25 1 - - - - - - 1.000 - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
65. TNFSF14 ENSDARG00000111357 2 1 - - - - - - 1.000 - - TNF superfamily member 14 [Source:ZFIN;Acc:ZDB-GENE-101109-3]
66. grapa ENSDARG00000005414 29 1 - - - - - - 1.000 - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
67. si:ch73-44m9.2 ENSDARG00000094821 101 1 - - - - - - 1.000 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
68. ms4a17a.2 ENSDARG00000105674 32 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
69. arsk ENSDARG00000059714, ENSDARG00000115105 31 1 - - - - - - 1.000 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
70. MAL2_1 MAL2_1 6 1 - - - - - - 1.000 - -
71. try 21 1 - - - - - - 1.000 - - trypsin
72. zgc:173577 ENSDARG00000098923 71 1 - - - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
73. MSH4 ENSDARG00000075826 37 1 - - - - - - 1.000 - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
74. si:ch211-238e22.5 ENSDARG00000100229 0 1 - - - - - - 1.000 - - si:ch211-238e22.5 [Source:ZFIN;Acc:ZDB-GENE-041210-374]
75. si:dkey-119p2.1 si:dkey-119p2.1 1 1 - - - - - - 1.000 - -
76. TRPC4 TRPC4 18 1 - - - - - - 1.000 - -
77. flt3 ENSDARG00000058503 32 1 - - - - - - 1.000 - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
78. BX470200.1 BX470200.1 1 1 - - - - - - 1.000 - -
79. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - - - - - - 1.000 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
80. CR790369.2 CR790369.2 0 1 - - - - - - 1.000 - -
81. tmem86b ENSDARG00000038296 3 1 - - - - - - 1.000 - - transmembrane protein 86B [Source:ZFIN;Acc:ZDB-GENE-060825-132]
82. star ENSDARG00000006137 149 1 - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
83. rfx6 ENSDARG00000041702 0 1 - - - - - - 1.000 - - regulatory factor X, 6 [Source:ZFIN;Acc:ZDB-GENE-041014-299]
84. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 - - - - - - 1.000 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
85. CABZ01087853.1 CABZ01087853.1 3 1 - - - - - - 1.000 - -
86. zgc:136461 ENSDARG00000093844, ENSDARG00000114728 1 1 - - - - - - 1.000 - - zgc:136461 [Source:ZFIN;Acc:ZDB-GENE-060519-7]
87. si:ch211-133l5.7 ENSDARG00000095633 3 1 - - - - - - 1.000 - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
88. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
89. CU694372.1 ENSDARG00000097988 105 1 - - - - - - 1.000 - -
90. BX005022.1 ENSDARG00000114221 0 1 - - - - - - 1.000 - -
91. abcg5 ENSDARG00000063078, ENSDARG00000115809 0 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-40]
92. CT030712.1 ENSDARG00000044355 83 1 - - - - - - 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
93. manba ENSDARG00000008238 25 1 - - - - - - 1.000 - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
94. si:dkey-28d5.2 si:dkey-28d5.2 2 1 - - - - - - 1.000 - -
95. tmem178 ENSDARG00000020758 77 1 - - - - - - 1.000 - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
96. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - - 1.000 - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
97. rhobtb2b ENSDARG00000089340 4 1 - - - - - - 1.000 - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
98. si:dkey-16p6.1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 0 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
99. syne3 ENSDARG00000023237 23 1 - - - - - - 1.000 - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
100. amn ENSDARG00000062947 36 1 - - - - - - 1.000 - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]

There are 923 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA