Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-49o11.1

Gene Name Gene ID Reads Annotation
si:dkey-49o11.1 0 si:dkey-49o11.1










Genes with expression patterns similar to si:dkey-49o11.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CT583679.2 CT583679.2 10 1 - 1.000 - - - - - - -
2. ddx26b 79 1 - 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
3. pcdh2ab7 7 1 - 1.000 - - - - - - - protocadherin 2 alpha b 7
4. DNAH10 ENSDARG00000061486 29 1 - 1.000 - - - - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
5. GPC6_1 GPC6_1 34 1 - 1.000 - - - - - - -
6. tagln3a ENSDARG00000079805 123 1 - 1.000 - - - - - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
7. CDH8 172 1 - 1.000 - - - - - - - cadherin 8
8. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - 1.000 - - - - - - -
9. CR391967.1 CR391967.1 135 1 - 1.000 - - - - - - -
10. prdm14 ENSDARG00000045371 106 1 - 1.000 - - - - - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
11. hoxc9a ENSDARG00000092809 18 1 - 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
12. si:dkey-106c17.1 si:dkey-106c17.1 26 1 - 1.000 - - - - - - -
13. zgc:113426 ENSDARG00000051793 37 1 - 1.000 - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
14. CU138503.3 CU138503.3 31 1 - 1.000 - - - - - - -
15. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
16. CU694445.1 ENSDARG00000111931 7 1 - 1.000 - - - - - - -
17. BX324210.1 BX324210.1 0 1 - 1.000 - - - - - - -
18. SCAMP5 SCAMP5 19 1 - 1.000 - - - - - - -
19. NPPC ENSDARG00000068126 45 1 - 1.000 - - - - - - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
20. si:dkey-42i9.8 ENSDARG00000071541 17 1 - 1.000 - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
21. zgc:113307 ENSDARG00000044894 17 1 - 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
22. CABZ01073334.1 CABZ01073334.1 1 1 - 1.000 - - - - - - -
23. USP43 USP43 14 1 - 1.000 - - - - - - -
24. FUT9 FUT9 91 1 - 1.000 - - - - - - -
25. C18H15orf59 C18H15orf59 80 1 - 1.000 - - - - - - -
26. CU695006.1 CU695006.1 4 1 - 1.000 - - - - - - -
27. DKK3 DKK3 12 1 - 1.000 - - - - - - -
28. CABZ01075242.1 ENSDARG00000114227 9 1 - 1.000 - - - - - - -
29. tmem91 ENSDARG00000068456 81 1 - 1.000 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
30. CU896563.2 CU896563.2 2 1 - 1.000 - - - - - - -
31. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1 - 1.000 - - - - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
32. si:dkey-19f21.8 si:dkey-19f21.8 12 1 - 1.000 - - - - - - -
33. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - 1.000 - - - - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
34. FAM184A ENSDARG00000014081 34 1 - 1.000 - - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
35. si:dkey-57l19.1 ENSDARG00000098143 1 1 - 1.000 - - - - - - - si:dkey-57l19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-171]
36. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - 1.000 - - - - - - -
37. aspn ENSDARG00000002192 218 1 - 1.000 - - - - - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
38. RNF214_1 RNF214_1 5 1 - 1.000 - - - - - - -
39. ptf1a ENSDARG00000014479 349 1 - 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
40. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1 - 1.000 - - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
41. DNAJC30 DNAJC30 47 1 - 1.000 - - - - - - -
42. myo3b ENSDARG00000006892 0 1 - 1.000 - - - - - - - myosin IIIB [Source:ZFIN;Acc:ZDB-GENE-070706-2]
43. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - 1.000 - - - - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
44. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
45. ENSDARG00000088231 ENSDARG00000088231 0 1 - 1.000 - - - - - - -
46. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - 1.000 - - - - - - -
47. hspb15 ENSDARG00000078411 6 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b15 [Source:ZFIN;Acc:ZDB-GENE-080214-5]
48. si:ch211-198c19.1 ENSDARG00000089333 3 1 - 1.000 - - - - - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
49. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - 1.000 - - - - - - -
50. TRPC4_1 TRPC4_1 212 1 - 1.000 - - - - - - -
51. tshb tshb 7 1 - 1.000 - - - - - - -
52. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
53. cyp46a4 cyp46a4 5 1 - 1.000 - - - - - - -
54. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - 1.000 - - - - - - -
55. AL935186.3 ENSDARG00000109223 19 1 - 1.000 - - - - - - -
56. trim46b ENSDARG00000058649 54 1 - 1.000 - - - - - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
57. KCNAB2 KCNAB2 129 1 - 1.000 - - - - - - -
58. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1 - 1.000 - - - - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
59. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1 - 1.000 - - - - - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
60. CT573433.2 CT573433.2 115 1 - 1.000 - - - - - - -
61. slc26a6l ENSDARG00000054127 8 1 - 1.000 - - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
62. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
63. CU570987.1 CU570987.1 7 1 - 1.000 - - - - - - -
64. si:dkey-40n15.2 si:dkey-40n15.2 1 1 - 1.000 - - - - - - -
65. PEG3_37 PEG3_37 4 1 - 1.000 - - - - - - -
66. FRMPD1 34 1 - 1.000 - - - - - - - FERM and PDZ domain containing 1, transcript variant X3
67. si:ch211-214p16.1 ENSDARG00000044129 64 1 - 1.000 - - - - - - - si:ch211-214p16.1 [Source:NCBI gene;Acc:368901]
68. CABZ01084273.1 CABZ01084273.1 16 1 - 1.000 - - - - - - -
69. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
70. lingo1a ENSDARG00000034165 179 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
71. si:dkey-32n7.7 ENSDARG00000063444 4 1 - 1.000 - - - - - - - si:dkey-32n7.7 [Source:ZFIN;Acc:ZDB-GENE-121214-179]
72. bdnf ENSDARG00000018817 193 1 - 1.000 - - - - - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
73. si:ch211-42i9.10 si:ch211-42i9.10 25 1 - 1.000 - - - - - - -
74. tmigd1 ENSDARG00000007040 19 1 - 1.000 - - - - - - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
75. pif1 ENSDARG00000020289 216 1 - 1.000 - - - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
76. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
77. calb1 ENSDARG00000031598 252 1 - 1.000 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
78. arl11l arl11l 31 1 - 1.000 - - - - - - -
79. igfbp5a ENSDARG00000039264, ENSDARG00000111203 117 1 - 1.000 - - - - - - - insulin-like growth factor binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-070620-8]
80. TUBB2A TUBB2A 142 1 - 1.000 - - - - - - -
81. zgc:153654 ENSDARG00000060322 9 1 - 1.000 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
82. mfsd4a mfsd4a 179 1 - 1.000 - - - - - - -
83. zgc:113691 ENSDARG00000038898 36 1 - 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
84. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
85. hspbap1 ENSDARG00000033771 41 1 - 1.000 - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
86. NPAS3 ENSDARG00000109820 362 1 - 1.000 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
87. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 1 - 1.000 - - - - - - - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
88. sirt7 ENSDARG00000060645 1 1 - 1.000 - - - - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
89. si:dkey-49o11.1 0 1 - 1.000 - - - - - - - si:dkey-49o11.1
90. CR388095.2 ENSDARG00000117604 76 1 - 1.000 - - - - - - -
91. CABZ01086828.1 CABZ01086828.1 1 1 - 1.000 - - - - - - -
92. CU571323.1 CU571323.1 7 1 - 1.000 - - - - - - -
93. MCF2L2 ENSDARG00000079742 52 1 - 1.000 - - - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
94. BX469915.2 BX469915.2 48 1 - 1.000 - - - - - - -
95. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
96. CT025910.1 CT025910.1 143 1 - 1.000 - - - - - - -
97. uckl1a ENSDARG00000001686 21 1 - 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
98. zeb2b ENSDARG00000078416 23 1 - 1.000 - - - - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
99. mir184 48 1 - 1.000 - - - - - - - microRNA 184
100. otpb ENSDARG00000058379 1143 1 - 1.000 - - - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]

There are 367 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA