Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-47k20.6

Gene Name Gene ID Reads Annotation
si:dkey-47k20.6 si:dkey-47k20.6 2










Genes with expression patterns similar to si:dkey-47k20.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-47k20.6 si:dkey-47k20.6 2 3 1.000 - 1.000 - - - 1.000 - -
2. wnt3a ENSDARG00000058822 5 2 - - 1.000 - - - 1.000 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
3. NFATC4 ENSDARG00000054162 44 1.933 1.000 - - - - - 0.933 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
4. SCARB2 SCARB2 24 1.906 1.000 - 0.906 - - - - - -
5. CU633857.1 ENSDARG00000115315 21 1.84 - - 0.840 - - - 1.000 - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
6. zfyve19 ENSDARG00000003642 12 1.823 1.000 - - - - - 0.823 - - zinc finger, FYVE domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-040718-109]
7. FANCA ENSDARG00000098241 39 1.758 1.000 - - - - - 0.758 - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
8. si:dkey-41e15.4 si:dkey-41e15.4 1 1 - - - - - - 1.000 - -
9. uts1 ENSDARG00000014927 35 1 1.000 - - - - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
10. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1 - - - - - - 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
11. si:ch211-268b13.3 si:ch211-268b13.3 28 1 1.000 - - - - - - - -
12. trpc2 trpc2 10 1 1.000 - - - - - - - -
13. si:ch211-219a15.3 ENSDARG00000087659 12 1 1.000 - - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
14. gabrr2b ENSDARG00000014057 9 1 - - - - - - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
15. U1_38 U1_38 1 1 - - - - - - 1.000 - -
16. cx55.5 13 1 - - - - - - 1.000 - - connexin 55.5, transcript variant X1
17. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - - - - - - 1.000 - -
18. C25HXorf38_1 C25HXorf38_1 35 1 1.000 - - - - - - - -
19. LRRC69 LRRC69 1 1 - - - - - - 1.000 - -
20. pdia2 ENSDARG00000018263 74 1 1.000 - - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
21. vsx2 ENSDARG00000005574 102 1 1.000 - - - - - - - - visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
22. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - - - - - - 1.000 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
23. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
24. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
25. mamdc2b ENSDARG00000073695 26 1 - - 1.000 - - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
26. pnp4b ENSDARG00000029230 6 1 1.000 - - - - - - - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
27. zswim7 ENSDARG00000067608 179 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
28. pigr ENSDARG00000101890 10 1 - - - - - - 1.000 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
29. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - - 1.000 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
30. scospondin ENSDARG00000067859 4 1 1.000 - - - - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
31. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1 1.000 - - - - - - - -
32. CU424462.2 CU424462.2 73 1 1.000 - - - - - - - -
33. traf1 ENSDARG00000069482 50 1 - - - - - - 1.000 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
34. CELA1 CELA1 14 1 - - - - - - 1.000 - -
35. mtus2 mtus2 22 1 - - - - - - 1.000 - -
36. grk7b ENSDARG00000055534 17 1 - - - - - - 1.000 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
37. cnfn ENSDARG00000041115 21 1 1.000 - - - - - - - - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
38. tekt1 ENSDARG00000101331 27 1 1.000 - - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
39. CR936465.1 CR936465.1 7 1 1.000 - - - - - - - -
40. tctn2 ENSDARG00000035633 84 1 1.000 - - - - - - - - tectonic family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-751]
41. BX664721.1 ENSDARG00000051804 21 1 1.000 - - - - - - - -
42. CABZ01031933.1 CABZ01031933.1 1 1 - - - - - - 1.000 - -
43. slc26a6l ENSDARG00000054127 8 1 - - 1.000 - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
44. CR388013.3 CR388013.3 45 1 1.000 - - - - - - - -
45. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - 1.000 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
46. APEH ENSDARG00000008703 73 1 1.000 - - - - - - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
47. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - - - - - - 1.000 - -
48. slc25a37 ENSDARG00000073743 31 1 1.000 - - - - - - - - solute carrier family 25 (mitochondrial iron transporter), member 37 [Source:ZFIN;Acc:ZDB-GENE-031118-202]
49. U3_10 U3_10 1 1 1.000 - - - - - - - -
50. pdcb ENSDARG00000017634 10 1 - - - - - - 1.000 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
51. CABZ01078431.1 CABZ01078431.1 183 1 1.000 - - - - - - - -
52. celsr2l celsr2l 1 1 1.000 - - - - - - - -
53. Metazoa_SRP_27 Metazoa_SRP_27 2 1 1.000 - - - - - - - -
54. zgc:171626 zgc:171626 42 1 1.000 - - - - - - - -
55. cadpsa ENSDARG00000043661 160 1 1.000 - - - - - - - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
56. zgc:152938 ENSDARG00000102586 97 1 - - - - - - 1.000 - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
57. si:dkey-148e22.3 si:dkey-148e22.3 4 1 - - - - - - 1.000 - -
58. nitr3a_1 ENSDARG00000110676 44 1 - - - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
59. fkbp5 ENSDARG00000028396 20 1 1.000 - - - - - - - - FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
60. zgc:195633_1 142 1 1.000 - - - - - - - - zgc:195633
61. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 1.000 - - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
62. cpa6 ENSDARG00000012013 73 1 1.000 - - - - - - - - carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]
63. si:ch73-189n23.1 ENSDARG00000086247 15 1 - - - - - - 1.000 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
64. MMP20 MMP20 1 1 - - - - - - 1.000 - -
65. sox11a ENSDARG00000077811 25 1 1.000 - - - - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
66. lingo3a ENSDARG00000061970 234 1 1.000 - - - - - - - - leucine rich repeat and Ig domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-060503-54]
67. ubr1 ENSDARG00000060480 71 1 - - - - - - 1.000 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
68. mei4 ENSDARG00000043912 10 1 - - 1.000 - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
69. ptx3a ENSDARG00000068275 589 1 1.000 - - - - - - - - pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
70. XKR8 XKR8 9 1 - - - - - - 1.000 - -
71. syce2 ENSDARG00000103187 12 1 1.000 - - - - - - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
72. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - 1.000 - - - - - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
73. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
74. nyx ENSDARG00000061791 2 1 - - 1.000 - - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
75. BEND2_1 BEND2_1 45 1 1.000 - - - - - - - -
76. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - - - - 1.000 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
77. avpr2aa ENSDARG00000007436 43 1 - - - - - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
78. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 1.000 - - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
79. ppp2r3a ENSDARG00000077722 7 1 - - - - - - 1.000 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
80. GALNTL6 ENSDARG00000040048 33 1 - - - - - - 1.000 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
81. U1_32 U1_32 2 1 1.000 - - - - - - - -
82. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
83. FAM177B 9 1 - - - - - - 1.000 - - family with sequence similarity 177 member B
84. SEMA6B SEMA6B 35 1 - - - - - - 1.000 - -
85. CR356223.4 CR356223.4 42 1 1.000 - - - - - - - -
86. CR942805.3 CR942805.3 7 1 1.000 - - - - - - - -
87. si:ch211-26b3.4 ENSDARG00000075491 50 1 1.000 - - - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
88. BIN1 BIN1 11 1 1.000 - - - - - - - -
89. lifra ENSDARG00000098857 11 1 1.000 - - - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
90. ddrgk1 ENSDARG00000037172 14 1 1.000 - - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
91. slc6a2 ENSDARG00000016141 49 1 - - - - - - 1.000 - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
92. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
93. si:ch211-190k17.13 si:ch211-190k17.13 48 1 - - - - - - 1.000 - -
94. ATP13A5 ATP13A5 13 1 - - - - - - 1.000 - -
95. apof ENSDARG00000090980 145 1 1.000 - - - - - - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
96. phf21aa ENSDARG00000006878 31 1 - - - - - - 1.000 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
97. gas5 279 1 1.000 - - - - - - - - growth arrest-specific 5, transcript variant X4
98. grm1a ENSDARG00000026796 9 1 1.000 - - - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
99. si:ch211-113a14.15_2 37 1 1.000 - - - - - - - - si:ch211-113a14.15
100. U1_35 U1_35 1 1 - - - - - - 1.000 - -

There are 637 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA