Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-47k16.3

Gene Name Gene ID Reads Annotation
si:dkey-47k16.3 si:dkey-47k16.3 17










Genes with expression patterns similar to si:dkey-47k16.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-47k16.3 si:dkey-47k16.3 17 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000
2. BX088525.2 ENSDARG00000117222 11 2 1.000 - - - - - - - 1.000
3. zgc:92658 8 2 1.000 - - - - - - - 1.000 zgc:92658
4. zgc:172051 ENSDARG00000086569 12 2 1.000 - - - - - - - 1.000 zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
5. cyp19a1b ENSDARG00000098360 8 1.93 1.000 - - - - - - - 0.930 cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
6. mmachc ENSDARG00000043877 29 1.905 1.000 0.905 - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
7. RNF14 ENSDARG00000043905 41 1.888 1.000 0.888 - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
8. HTR1E 103 1.881 1.000 0.881 - - - - - - - 5-hydroxytryptamine receptor 1E
9. BX664622.1 ENSDARG00000101754 39 1.875 - 0.901 - 0.974 - - - - -
10. mettl21a ENSDARG00000012051 86 1.79 1.000 0.790 - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
11. epb41l3b ENSDARG00000019917 9 1.756 1.000 - - - - - - - 0.756 erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
12. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.746 0.746 - - - - - - - 1.000
13. fermt3a fermt3a 56 1.737 1.000 - - 0.737 - - - - -
14. si:dkey-199m13.1 si:dkey-199m13.1 3 1.734 - - - - - - 0.734 - 1.000
15. vipr1b ENSDARG00000059058 62 1.73 1.000 0.730 - - - - - - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
16. TGFBR3L TGFBR3L 16 1.716 1.000 - - - - - - - 0.716
17. RPS6KL1 ENSDARG00000079024 22 1.715 - 0.888 - 0.827 - - - - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
18. mecom ENSDARG00000060808 8 1.644 - 0.888 - - - - - - 0.756 MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
19. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.632 - 0.891 - - - 0.741 - - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
20. zgc:173556 82 1.617 - 0.883 - - - - 0.734 - - zgc:173556
21. uox ENSDARG00000007024 205 1.608 - 0.908 - - - - 0.700 - - urate oxidase [Source:ZFIN;Acc:ZDB-GENE-030826-24]
22. AL954372.1_1 ENSDARG00000112499 57 1.548 0.746 - - 0.802 - - - - -
23. si:ch211-167b20.7 si:ch211-167b20.7 3 1.53 - - - - - - 0.734 0.796 -
24. ACOT12 ENSDARG00000054534 61 1.526 - 0.802 - - - - 0.724 - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
25. phf21aa ENSDARG00000006878 31 1.499 - - 0.779 - - - - - 0.720 PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
26. CABZ01073032.1 CABZ01073032.1 125 1.492 - 0.785 - - - - 0.707 - -
27. USH1G USH1G 25 1.473 - - - 0.739 - - 0.734 - -
28. SNORA54 SNORA54 232 1.417 - 0.704 - - - 0.713 - - -
29. zgc:113343 ENSDARG00000103196 2 1 - - - - - - - - 1.000 zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
30. si:dkey-11n6.3 si:dkey-11n6.3 1 1 - - - - - - - - 1.000
31. si:dkey-85n7.8 ENSDARG00000095793 31 1 1.000 - - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
32. plekha7a ENSDARG00000060813 179 1 1.000 - - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
33. calhm1 ENSDARG00000077021 2 1 1.000 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
34. flnb ENSDARG00000092281 10 1 1.000 - - - - - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
35. CRYGM4 ENSDARG00000008219 1 1 - - - - - - - - 1.000 crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
36. CU984579.1 ENSDARG00000116863 15 1 1.000 - - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
37. si:dkey-176f19.5 si:dkey-176f19.5 10 1 - - - - - - - - 1.000
38. smpd3 ENSDARG00000098226 1 1 1.000 - - - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
39. BX000442.2 BX000442.2 8 1 - - - - - - - - 1.000
40. CABZ01085054.1 CABZ01085054.1 20 1 1.000 - - - - - - - -
41. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 1.000 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
42. TMEM221 TMEM221 62 1 1.000 - - - - - - - -
43. cyb561 ENSDARG00000038176 55 1 1.000 - - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
44. l3mbtl3 ENSDARG00000025983 12 1 - - - - - - - - 1.000 l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
45. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
46. NUGGC NUGGC 9 1 - - - - - - - - 1.000
47. cd28 ENSDARG00000095070 0 1 - - - - - - - - 1.000 CD28 molecule [Source:ZFIN;Acc:ZDB-GENE-070912-128]
48. CABZ01080492.1 CABZ01080492.1 495 1 1.000 - - - - - - - -
49. SYDE1 ENSDARG00000077440 4 1 - - - - - - - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
50. si:ch211-284e13.9 ENSDARG00000093214 2 1 - - - - - - - - 1.000 si:ch211-284e13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-164]
51. ZBTB40 ENSDARG00000091762 57 1 1.000 - - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
52. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1 1.000 - - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
53. FP236168.1 FP236168.1 150 1 1.000 - - - - - - - -
54. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
55. GLB1L2 ENSDARG00000034941 74 1 1.000 - - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
56. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 1.000 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
57. dcun1d5 ENSDARG00000100363 3 1 1.000 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
58. si:ch211-122i22.6 si:ch211-122i22.6 1 1 1.000 - - - - - - - -
59. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
60. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
61. tnfrsfa ENSDARG00000004451 4 1 - - - - - - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
62. 5S_rRNA_10 5S_rRNA_10 2 1 1.000 - - - - - - - -
63. zgc:173603 zgc:173603 2 1 - - - - - - - - 1.000
64. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
65. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
66. TMEM260 ENSDARG00000076362 63 1 1.000 - - - - - - - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
67. or115-8 ENSDARG00000092406 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
68. ETS1 ENSDARG00000024431 6 1 1.000 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
69. BX323064.1 ENSDARG00000099914 11 1 1.000 - - - - - - - -
70. si:dkey-117k10.8 si:dkey-117k10.8 17 1 1.000 - - - - - - - -
71. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000
72. AL807829.1 AL807829.1 2 1 1.000 - - - - - - - -
73. crtac1a ENSDARG00000059826 22 1 1.000 - - - - - - - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
74. itga2.2 ENSDARG00000062974 27 1 1.000 - - - - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
75. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
76. ifit2 ifit2 11 1 1.000 - - - - - - - -
77. BX119963.1 ENSDARG00000096135 28 1 1.000 - - - - - - - -
78. ZBED1_5 ZBED1_5 1 1 1.000 - - - - - - - -
79. si:dkey-199m13.6 si:dkey-199m13.6 53 1 1.000 - - - - - - - -
80. si:ch73-299h12.1 ENSDARG00000102321 233 1 1.000 - - - - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
81. SNORA81_1 SNORA81_1 8 1 1.000 - - - - - - - -
82. GRIN3B GRIN3B 16 1 1.000 - - - - - - - -
83. CABZ01006254.1 CABZ01006254.1 95 1 1.000 - - - - - - - -
84. KAZN_1 KAZN_1 13 1 1.000 - - - - - - - -
85. taar13d ENSDARG00000110650 0 1 - - - - - - - - 1.000 trace amine associated receptor 13d [Source:ZFIN;Acc:ZDB-GENE-041014-62]
86. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1 1.000 - - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
87. Metazoa_SRP_2 Metazoa_SRP_2 2 1 1.000 - - - - - - - -
88. gaa ENSDARG00000090714 19 1 1.000 - - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
89. SNORA62_1 SNORA62_1 1 1 - - - - - - - - 1.000
90. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 1.000 - - - - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
91. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
92. BX000701.3 BX000701.3 4 1 1.000 - - - - - - - -
93. OSBP2 ENSDARG00000053487 15 1 1.000 - - - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
94. or115-14 ENSDARG00000094235 17 1 1.000 - - - - - - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
95. CABZ01078481.1 CABZ01078481.1 6 1 1.000 - - - - - - - -
96. si:ch211-197k17.3 ENSDARG00000096214 2 1 - - - - - - - - 1.000 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
97. Metazoa_SRP_24 Metazoa_SRP_24 4 1 1.000 - - - - - - - -
98. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
99. ftr79 ENSDARG00000093972 1 1 - - - - - - - - 1.000 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
100. ppid_1 ENSDARG00000038835 4 1 1.000 - - - - - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]

There are 1166 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA