Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-47k16.3

Gene Name Gene ID Reads Annotation
si:dkey-47k16.3 si:dkey-47k16.3 17










Genes with expression patterns similar to si:dkey-47k16.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-47k16.3 si:dkey-47k16.3 17 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000
2. zgc:172051 ENSDARG00000086569 12 2 1.000 - - - - - - - 1.000 zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
3. zgc:92658 8 2 1.000 - - - - - - - 1.000 zgc:92658
4. BX088525.2 ENSDARG00000117222 11 2 1.000 - - - - - - - 1.000
5. cyp19a1b ENSDARG00000098360 8 1.93 1.000 - - - - - - - 0.930 cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
6. mmachc ENSDARG00000043877 29 1.905 1.000 0.905 - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
7. RNF14 ENSDARG00000043905 41 1.888 1.000 0.888 - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
8. HTR1E 103 1.881 1.000 0.881 - - - - - - - 5-hydroxytryptamine receptor 1E
9. BX664622.1 ENSDARG00000101754 39 1.875 - 0.901 - 0.974 - - - - -
10. mettl21a ENSDARG00000012051 86 1.79 1.000 0.790 - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
11. epb41l3b ENSDARG00000019917 9 1.756 1.000 - - - - - - - 0.756 erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
12. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.746 0.746 - - - - - - - 1.000
13. fermt3a fermt3a 56 1.737 1.000 - - 0.737 - - - - -
14. si:dkey-199m13.1 si:dkey-199m13.1 3 1.734 - - - - - - 0.734 - 1.000
15. vipr1b ENSDARG00000059058 62 1.73 1.000 0.730 - - - - - - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
16. TGFBR3L TGFBR3L 16 1.716 1.000 - - - - - - - 0.716
17. RPS6KL1 ENSDARG00000079024 22 1.715 - 0.888 - 0.827 - - - - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
18. mecom ENSDARG00000060808 8 1.644 - 0.888 - - - - - - 0.756 MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
19. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.632 - 0.891 - - - 0.741 - - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
20. zgc:173556 82 1.617 - 0.883 - - - - 0.734 - - zgc:173556
21. uox ENSDARG00000007024 205 1.608 - 0.908 - - - - 0.700 - - urate oxidase [Source:ZFIN;Acc:ZDB-GENE-030826-24]
22. AL954372.1_1 ENSDARG00000112499 57 1.548 0.746 - - 0.802 - - - - -
23. si:ch211-167b20.7 si:ch211-167b20.7 3 1.53 - - - - - - 0.734 0.796 -
24. ACOT12 ENSDARG00000054534 61 1.526 - 0.802 - - - - 0.724 - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
25. phf21aa ENSDARG00000006878 31 1.499 - - 0.779 - - - - - 0.720 PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
26. CABZ01073032.1 CABZ01073032.1 125 1.492 - 0.785 - - - - 0.707 - -
27. USH1G USH1G 25 1.473 - - - 0.739 - - 0.734 - -
28. SNORA54 SNORA54 232 1.417 - 0.704 - - - 0.713 - - -
29. SDR16C5 SDR16C5 34 1 - - - - - - - - 1.000
30. ftr79 ENSDARG00000093972 1 1 - - - - - - - - 1.000 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
31. l3mbtl3 ENSDARG00000025983 12 1 - - - - - - - - 1.000 l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
32. SP5 SP5 8 1 - - - - - - - - 1.000
33. kcnk15 ENSDARG00000077371 1 1 - - - - - - - - 1.000 potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
34. si:dkey-26g8.9 si:dkey-26g8.9 2 1 1.000 - - - - - - - -
35. CU694385.1 CU694385.1 1 1 1.000 - - - - - - - -
36. arl8 ENSDARG00000094709 6 1 1.000 - - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
37. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
38. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
39. ubxn10 ENSDARG00000052535 24 1 1.000 - - - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
40. AL935184.1 ENSDARG00000070039 1 1 1.000 - - - - - - - -
41. CU571315.2 ENSDARG00000101956 15 1 - - - - - - - - 1.000
42. si:dkey-217m5.3 si:dkey-217m5.3 22 1 1.000 - - - - - - - -
43. FAM150A 14 1 1.000 - - - - - - - - family with sequence similarity 150 member A, transcript variant X2
44. CREM_1 CREM_1 9 1 1.000 - - - - - - - -
45. SYDE1 ENSDARG00000077440 4 1 - - - - - - - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
46. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 1.000 - - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
47. GLB1L2 ENSDARG00000034941 74 1 1.000 - - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
48. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 1.000 - - - - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
49. si:dkey-157e10.5 si:dkey-157e10.5 1 1 1.000 - - - - - - - -
50. si:ch211-170d12.2 si:ch211-170d12.2 1 1 1.000 - - - - - - - -
51. SNORA81_1 SNORA81_1 8 1 1.000 - - - - - - - -
52. katna1 ENSDARG00000021827 221 1 1.000 - - - - - - - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
53. prop1 ENSDARG00000039756, ENSDARG00000109950, ENSDARG00000114449 10 1 - - - - - - - - 1.000 PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]
54. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - - - 1.000 nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
55. zp2.2 ENSDARG00000105346 23 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
56. dmbx1a ENSDARG00000009922 284 1 1.000 - - - - - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
57. URB1 ENSDARG00000060308 78 1 1.000 - - - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
58. itga2.2 ENSDARG00000062974 27 1 1.000 - - - - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
59. tnfrsfa ENSDARG00000004451 4 1 - - - - - - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
60. mrc1b ENSDARG00000038822 73 1 1.000 - - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
61. CABZ01076534.1 CABZ01076534.1 1 1 1.000 - - - - - - - -
62. zgc:113343 ENSDARG00000103196 2 1 - - - - - - - - 1.000 zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
63. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 1.000 - - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
64. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - - - - - - - - 1.000
65. 5S_rRNA_10 5S_rRNA_10 2 1 1.000 - - - - - - - -
66. vmhcl 119 1 1.000 - - - - - - - - ventricular myosin heavy chain-like
67. cfhl5 ENSDARG00000105052 25 1 1.000 - - - - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
68. COL18A1 COL18A1 0 1 - - - - - - - - 1.000
69. BX000701.3 BX000701.3 4 1 1.000 - - - - - - - -
70. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]
71. KLHL38 KLHL38 15 1 1.000 - - - - - - - -
72. ASPG ENSDARG00000052942 1 1 1.000 - - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
73. SNORD46 SNORD46 0 1 - - - - - - - - 1.000
74. BX323854.3 BX323854.3 62 1 1.000 - - - - - - - -
75. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 1.000 - - - - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
76. ETS1 ENSDARG00000024431 6 1 1.000 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
77. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1 1.000 - - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
78. Metazoa_SRP_23 Metazoa_SRP_23 3 1 1.000 - - - - - - - -
79. CABZ01079304.1 CABZ01079304.1 7 1 1.000 - - - - - - - -
80. cga ENSDARG00000040479 3 1 - - - - - - - - 1.000 glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
81. AL935186.2 ENSDARG00000097345 6 1 1.000 - - - - - - - -
82. FAM177A1 ENSDARG00000079636 19 1 1.000 - - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
83. CR388416.3 CR388416.3 1 1 - - - - - - - - 1.000
84. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - - - 1.000
85. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
86. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
87. bmpr2b ENSDARG00000020057 8 1 1.000 - - - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
88. cmlc1 ENSDARG00000032976 455 1 1.000 - - - - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
89. uts2b ENSDARG00000017340 0 1 - - - - - - - - 1.000 urotensin 2, beta [Source:ZFIN;Acc:ZDB-GENE-040630-10]
90. CRYGM4 ENSDARG00000008219 1 1 - - - - - - - - 1.000 crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
91. ca4a ENSDARG00000043589 1 1 - - - - - - - - 1.000 carbonic anhydrase IV a [Source:ZFIN;Acc:ZDB-GENE-080204-85]
92. si:ch211-122i22.6 si:ch211-122i22.6 1 1 1.000 - - - - - - - -
93. ssh1b ENSDARG00000010031 4 1 1.000 - - - - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
94. C8H20orf112 C8H20orf112 1 1 - - - - - - - - 1.000
95. ENSDARG00000088726 ENSDARG00000088726 0 1 - - - - - - - - 1.000
96. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
97. sult2st3 ENSDARG00000028367 79 1 1.000 - - - - - - - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
98. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 1.000 - - - - - - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
99. GPR116_3 GPR116_3 9 1 1.000 - - - - - - - -
100. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - - - - - - - - 1.000

There are 1166 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA