Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-43f9.1

Gene Name Gene ID Reads Annotation
si:dkey-43f9.1 si:dkey-43f9.1 7










Genes with expression patterns similar to si:dkey-43f9.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-43f9.1 si:dkey-43f9.1 7 5 - - 1.000 1.000 1.000 - - 1.000 1.000
2. tk1 ENSDARG00000102245 1 1.772 - - 0.772 1.000 - - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
3. pde8b ENSDARG00000063706 1 1.73 - - 0.772 0.958 - - - - - phosphodiesterase 8B [Source:ZFIN;Acc:ZDB-GENE-091117-3]
4. si:dkey-242e21.4 1 1.658 - - 0.772 0.886 - - - - - si:dkey-242e21.4
5. themis ENSDARG00000010619 5 1.628 - - 0.772 - - - - - 0.856 thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
6. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1.628 - - 0.772 - - - - - 0.856
7. CABZ01087025.1 ENSDARG00000117232 10 1.628 - - 0.772 - - - - - 0.856
8. sla2 ENSDARG00000020788, ENSDARG00000115055 13 1.567 - - - 0.845 - - - 0.722 - Src-like-adaptor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-98]
9. crfb13 crfb13 2 1 - - 1.000 - - - - - -
10. mtmr1a ENSDARG00000056690 4 1 - - 1.000 - - - - - - myotubularin related protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-518]
11. brpf3 brpf3 15 1 - - - 1.000 - - - - -
12. grin2ca ENSDARG00000078149 13 1 - - 1.000 - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca [Source:ZFIN;Acc:ZDB-GENE-070822-3]
13. gucy2f ENSDARG00000025504 6 1 - - 1.000 - - - - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
14. abch1 ENSDARG00000071341 1 1 - - 1.000 - - - - - - ATP-binding cassette, sub-family H, member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-42]
15. BX571969.1 BX571969.1 8 1 - - 1.000 - - - - - -
16. AL935174.1 ENSDARG00000109674 18 1 - - 1.000 - - - - - -
17. si:ch211-71k24.5 si:ch211-71k24.5 9 1 - - 1.000 - - - - - -
18. slc15a1b ENSDARG00000044528 6 1 - - 1.000 - - - - - - solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
19. si:dkey-229d2.7 ENSDARG00000092460 15 0.978 - - - - - - - - 0.978 si:dkey-229d2.7 [Source:ZFIN;Acc:ZDB-GENE-060526-265]
20. C14orf80 C14orf80 20 0.969 - - - - - - - - 0.969
21. rnf150a_1 ENSDARG00000024827 12 0.969 - - - - 0.969 - - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
22. exosc4 ENSDARG00000103432 21 0.968 - - - - 0.968 - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
23. ndufv3_1 ENSDARG00000090389 25 0.968 - - - - 0.968 - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
24. HMHA1 HMHA1 2 0.958 - - - 0.958 - - - - -
25. spic ENSDARG00000012435 1 0.958 - - - 0.958 - - - - - Spi-C transcription factor (Spi-1/PU.1 related) [Source:ZFIN;Acc:ZDB-GENE-040912-47]
26. INTS5_1 INTS5_1 1 0.958 - - - 0.958 - - - - -
27. irgf1 ENSDARG00000070774 7 0.958 - - - 0.958 - - - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
28. si:dkey-10o6.2 ENSDARG00000074628 22 0.958 - - - 0.958 - - - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
29. si:dkey-70b24.7 si:dkey-70b24.7 5 0.958 - - - 0.958 - - - - -
30. sult1st3 ENSDARG00000018361 7 0.958 - - - 0.958 - - - - - sulfotransferase family 1, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-030804-28]
31. BX005364.1 ENSDARG00000092439 1 0.958 - - - 0.958 - - - - -
32. mapkapk2b ENSDARG00000018530 2 0.958 - - - 0.958 - - - - - mitogen-activated protein kinase-activated protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-071018-1]
33. FOXO6 FOXO6 5 0.958 - - - 0.958 - - - - -
34. si:dkey-152b24.7 ENSDARG00000099715 26 0.958 - - - 0.958 - - - - - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
35. ENSDARG00000077328 ENSDARG00000077328 1 0.958 - - - 0.958 - - - - -
36. CREB3L3 CREB3L3 24 0.958 - - - 0.958 - - - - -
37. si:ch211-120c15.1 si:ch211-120c15.1 20 0.958 - - - 0.958 - - - - -
38. si:dkey-4c15.4 si:dkey-4c15.4 1 0.958 - - - 0.958 - - - - -
39. st8sia1_1 ENSDARG00000098221 16 0.958 - - - 0.958 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
40. si:ch73-60p2.1 si:ch73-60p2.1 21 0.958 - - - 0.958 - - - - -
41. GABRR3 GABRR3 3 0.958 - - - 0.958 - - - - -
42. zgc:153394 zgc:153394 5 0.958 - - - 0.958 - - - - -
43. CLCN2 CLCN2 8 0.958 - - - 0.958 - - - - -
44. FP245465.3 FP245465.3 5 0.958 - - - 0.958 - - - - -
45. zmynd10 ENSDARG00000002406, ENSDARG00000110880, ENSDARG00000114303 10 0.958 - - - 0.958 - - - - - zinc finger, MYND-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1218]
46. AL935141.5 AL935141.5 24 0.958 - - - 0.958 - - - - -
47. si:dkey-3k20.1 ENSDARG00000092274 1 0.958 - - - 0.958 - - - - - si:dkey-3k20.1 [Source:ZFIN;Acc:ZDB-GENE-050208-745]
48. ENSDARG00000089062 ENSDARG00000089062 7 0.958 - - - 0.958 - - - - -
49. CU896563.2 CU896563.2 2 0.958 - - - 0.958 - - - - -
50. foxq2 ENSDARG00000071394 3 0.958 - - - 0.958 - - - - - forkhead box Q2 [Source:ZFIN;Acc:ZDB-GENE-050208-663]
51. si:ch73-269m14.4 ENSDARG00000086612 20 0.958 - - - 0.958 - - - - - si:ch73-269m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-94]
52. si:dkey-204f11.29p si:dkey-204f11.29p 1 0.958 - - - 0.958 - - - - -
53. cyp21a2 ENSDARG00000037550, ENSDARG00000116555 3 0.958 - - - 0.958 - - - - - cytochrome P450, family 21, subfamily A, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070103-6]
54. mirlet7a-6 15 0.958 - - - 0.958 - - - - - microRNA let7a-6
55. si:dkey-269o24.7 si:dkey-269o24.7 28 0.958 - - - 0.958 - - - - -
56. dnah7 ENSDARG00000060165 21 0.958 - - - 0.958 - - - - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
57. THAP9 THAP9 8 0.958 - - - 0.958 - - - - -
58. HDAC7 HDAC7 12 0.958 - - - 0.958 - - - - -
59. mc2r ENSDARG00000054949 1 0.958 - - - 0.958 - - - - - melanocortin 2 receptor [Source:ZFIN;Acc:ZDB-GENE-030502-2]
60. rbp1b rbp1b 36 0.958 - - - - 0.958 - - - -
61. mrap ENSDARG00000091992 9 0.958 - - - 0.958 - - - - - melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
62. zgc:162235 zgc:162235 9 0.958 - - - 0.958 - - - - -
63. TMEM241 ENSDARG00000090685 11 0.958 - - - 0.958 - - - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
64. hsd3b1 ENSDARG00000069926 35 0.958 - - - 0.958 - - - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
65. C4H12orf56 C4H12orf56 16 0.958 - - - 0.958 - - - - -
66. glmnb ENSDARG00000010958, ENSDARG00000109932 6 0.957 - - 0.957 - - - - - - glomulin, FKBP associated protein b [Source:ZFIN;Acc:ZDB-GENE-080723-14]
67. pdlim3a ENSDARG00000011023, ENSDARG00000115861 3 0.955 - - - - 0.955 - - - - PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-050505-1]
68. slco1f3 ENSDARG00000105691 6 0.955 - - - - 0.955 - - - - solute carrier organic anion transporter family, member 1F3 [Source:ZFIN;Acc:ZDB-GENE-080212-5]
69. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 0.955 - - - - 0.955 - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
70. CR388163.1 ENSDARG00000096928 5 0.955 - - - - 0.955 - - - -
71. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 0.955 - - - - 0.955 - - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]
72. DOCK1_1 DOCK1_1 2 0.955 - - - - 0.955 - - - -
73. BX465203.1 ENSDARG00000113985 8 0.955 - - - - 0.955 - - - -
74. CU464087.1 ENSDARG00000105588 2 0.955 - - - - 0.955 - - - -
75. si:ch211-113a14.26 5 0.955 - - - - 0.955 - - - - si:ch211-113a14.26
76. tmem8c 10 0.955 - - - - 0.955 - - - - transmembrane protein 8C, transcript variant X1
77. si:dkey-54j5.1 si:dkey-54j5.1 4 0.955 - - - - 0.955 - - - -
78. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 0.948 - - - 0.948 - - - - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
79. hsp70l_1 ENSDARG00000055723 72 0.944 - - - - 0.944 - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
80. DOK2 ENSDARG00000075818 8 0.942 - - 0.942 - - - - - - docking protein 2 [Source:ZFIN;Acc:ZDB-GENE-080721-4]
81. emc4_1 ENSDARG00000039268 443 0.932 - - - 0.932 - - - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
82. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 0.916 - - - - 0.916 - - - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
83. star ENSDARG00000006137 149 0.912 - - - 0.912 - - - - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
84. gfi1aa ENSDARG00000020746 30 0.906 - - - - 0.906 - - - - growth factor independent 1A transcription repressor a [Source:ZFIN;Acc:ZDB-GENE-050522-534]
85. phf21aa ENSDARG00000006878 31 0.903 - - - 0.903 - - - - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
86. bhik bhik 23 0.898 - - - - 0.898 - - - -
87. cenpv ENSDARG00000092285 10 0.892 - - - - 0.892 - - - - centromere protein V [Source:ZFIN;Acc:ZDB-GENE-060526-76]
88. si:ch211-187d1.1 si:ch211-187d1.1 4 0.89 - - - 0.890 - - - - -
89. dnah5 ENSDARG00000087373 168 0.889 - - - 0.889 - - - - - dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
90. si:dkey-88n24.8 ENSDARG00000091095 9 0.887 - - - - 0.887 - - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
91. mir124-1 10 0.887 - - - - 0.887 - - - - microRNA 124-1
92. BX119910.5 BX119910.5 3 0.879 - - - - - - - - 0.879
93. ppfia2 ENSDARG00000013000 45 0.879 - - - - - - - - 0.879 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
94. mir184 48 0.879 - - - - - - - - 0.879 microRNA 184
95. zgc:111868 ENSDARG00000099060 68 0.874 - - - - 0.874 - - - - zgc:111868 [Source:ZFIN;Acc:ZDB-GENE-050809-138]
96. si:ch211-272h9.5 ENSDARG00000092167 8 0.873 - - - 0.873 - - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
97. CT955963.1 ENSDARG00000100370 23 0.868 - - - - 0.868 - - - -
98. nr0b1 ENSDARG00000056541 35 0.866 - - - - 0.866 - - - - nuclear receptor subfamily 0, group B, member 1 [Source:ZFIN;Acc:ZDB-GENE-070130-1]
99. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 0.865 - - 0.865 - - - - - - syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
100. si:ch211-279m15.1 si:ch211-279m15.1 67 0.864 - - - 0.864 - - - - -

There are 252 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA