Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-40n15.2

Gene Name Gene ID Reads Annotation
si:dkey-40n15.2 si:dkey-40n15.2 1










Genes with expression patterns similar to si:dkey-40n15.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-40n15.2 si:dkey-40n15.2 1 3 - 1.000 1.000 - - - - 1.000 -
2. si:dkey-57l19.1 ENSDARG00000098143 1 2 - 1.000 - - - - - 1.000 - si:dkey-57l19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-171]
3. lrmp ENSDARG00000045574 26 1.863 - 0.907 0.956 - - - - - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
4. cnga3b ENSDARG00000012297 2 1.8 - 1.000 0.800 - - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
5. EFCAB6 ENSDARG00000020735 34 1.777 - 0.816 0.961 - - - - - - EF-hand calcium binding domain 6 [Source:ZFIN;Acc:ZDB-GENE-070828-2]
6. sst2 ENSDARG00000014190 617 1.727 - 1.000 - - - - - 0.727 - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
7. SNORA14 SNORA14 10 1.708 - 1.000 0.708 - - - - - -
8. si:dkey-43b14.8 35 1 - 1.000 - - - - - - - si:dkey-43b14.8
9. foxq1a ENSDARG00000030896 121 1 - 1.000 - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
10. si:dkey-224b4.5 3 1 - - - - - - - 1.000 - si:dkey-224b4.5, transcript variant X5
11. si:ch211-198c19.1 ENSDARG00000089333 3 1 - 1.000 - - - - - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
12. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
13. TRPC4_1 TRPC4_1 212 1 - 1.000 - - - - - - -
14. SNORA81_1 SNORA81_1 8 1 - 1.000 - - - - - - -
15. si:ch211-141e20.2 ENSDARG00000093349 61 1 - 1.000 - - - - - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
16. RIMS1 RIMS1 9 1 - 1.000 - - - - - - -
17. BRPF1 ENSDARG00000103665 10 1 - - - - - - - 1.000 - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
18. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - 1.000 - - - - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
19. TMC2 TMC2 5 1 - 1.000 - - - - - - -
20. si:dkey-191m6.3 si:dkey-191m6.3 0 1 - - - - - - - 1.000 -
21. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1 - 1.000 - - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
22. GJD2_1 GJD2_1 3045 1 - 1.000 - - - - - - -
23. si:ch211-38m6.6 ENSDARG00000076959 12 1 - 1.000 - - - - - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
24. si:ch211-53m15.2 ENSDARG00000094928 1 1 - - - - - - - 1.000 - si:ch211-53m15.2 [Source:ZFIN;Acc:ZDB-GENE-100922-24]
25. wu:fj49c06 wu:fj49c06 0 1 - 1.000 - - - - - - -
26. C18H15orf59 C18H15orf59 80 1 - 1.000 - - - - - - -
27. vrtn ENSDARG00000061963, ENSDARG00000115943 42 1 - 1.000 - - - - - - - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
28. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
29. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - 1.000 - - - - - - -
30. BX119910.13 BX119910.13 4 1 - 1.000 - - - - - - -
31. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
32. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1 - 1.000 - - - - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
33. baiap2l1b ENSDARG00000031119 71 1 - 1.000 - - - - - - - BAI1-associated protein 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-050417-371]
34. ptf1a ENSDARG00000014479 349 1 - 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
35. calb1 ENSDARG00000031598 252 1 - 1.000 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
36. cobl ENSDARG00000091006 4 1 - 1.000 - - - - - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
37. C6H3orf67 C6H3orf67 1 1 - 1.000 - - - - - - -
38. zgc:195195 zgc:195195 6 1 - 1.000 - - - - - - -
39. zgc:173713 17 1 - 1.000 - - - - - - - zgc:173713, transcript variant X2
40. cacna1ab ENSDARG00000006923 12 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
41. sc:d136 sc:d136 2 1 - 1.000 - - - - - - -
42. CR769772.1 ENSDARG00000092772 0 1 - 1.000 - - - - - - -
43. U6_23 U6_23 0 1 - 1.000 - - - - - - -
44. si:ch211-286b5.9 ENSDARG00000086166 27 1 - 1.000 - - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
45. grik4 ENSDARG00000026753 22 1 - - 1.000 - - - - - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
46. CR387932.1 ENSDARG00000097344 2 1 - 1.000 - - - - - - -
47. SLC26A3 SLC26A3 8 1 - - - - - - - 1.000 -
48. CU928217.1 CU928217.1 12 1 - 1.000 - - - - - - -
49. FRMPD1 34 1 - 1.000 - - - - - - - FERM and PDZ domain containing 1, transcript variant X3
50. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - 1.000 - - - - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
51. lingo1b ENSDARG00000035899 86 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
52. tmem91 ENSDARG00000068456 81 1 - 1.000 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
53. si:ch211-113a14.15_1 2 1 - 1.000 - - - - - - - si:ch211-113a14.15
54. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - 1.000 - si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
55. gltpb ENSDARG00000077962 5 1 - 1.000 - - - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
56. FUT9 FUT9 91 1 - 1.000 - - - - - - -
57. BX548000.1 ENSDARG00000099044 45 1 - 1.000 - - - - - - -
58. si:dkeyp-114g9.1 ENSDARG00000069401 3 1 - - - - - - - 1.000 - si:dkeyp-114g9.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5466]
59. U6_20 U6_20 0 1 - 1.000 - - - - - - -
60. nkiras2_1 ENSDARG00000052594 31 1 - 1.000 - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
61. NPFFR1 ENSDARG00000111997 29 1 - - 1.000 - - - - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
62. fam163b ENSDARG00000073914 46 1 - 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
63. zgc:153654 ENSDARG00000060322 9 1 - 1.000 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
64. lingo1a ENSDARG00000034165 179 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
65. KCNG2 ENSDARG00000035961 58 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
66. cacng3b ENSDARG00000076401 91 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
67. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 - 1.000 - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
68. ascc2 ENSDARG00000013058 228 1 - 1.000 - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
69. clic5b ENSDARG00000070584 4 1 - - - - - - - 1.000 - chloride intracellular channel 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2542]
70. sirt7 ENSDARG00000060645 1 1 - 1.000 - - - - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
71. mfsd4a mfsd4a 179 1 - 1.000 - - - - - - -
72. BX324210.1 BX324210.1 0 1 - 1.000 - - - - - - -
73. gucy1b3 92 1 - 1.000 - - - - - - - guanylate cyclase 1, soluble, beta 3
74. MCF2L2 ENSDARG00000079742 52 1 - 1.000 - - - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
75. tecrl2 tecrl2 11 1 - 1.000 - - - - - - -
76. TUBB2A TUBB2A 142 1 - 1.000 - - - - - - -
77. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - - - - - - - 1.000 - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
78. CABZ01041769.1 CABZ01041769.1 17 1 - 1.000 - - - - - - -
79. slc17a6b ENSDARG00000041150 823 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
80. otpb ENSDARG00000058379 1143 1 - 1.000 - - - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
81. atxn1b ENSDARG00000060862 345 1 - 1.000 - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
82. USP43 USP43 14 1 - 1.000 - - - - - - -
83. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - 1.000 - - - - - - -
84. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - - - - - - - 1.000 -
85. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - 1.000 - - - - - - -
86. ENSDARG00000088231 ENSDARG00000088231 0 1 - 1.000 - - - - - - -
87. tagln3a ENSDARG00000079805 123 1 - 1.000 - - - - - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
88. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - 1.000 - - - - - - -
89. khdrbs2 ENSDARG00000069469 160 1 - 1.000 - - - - - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
90. cx39.4 ENSDARG00000070357 17 1 - 1.000 - - - - - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
91. hoxc9a ENSDARG00000092809 18 1 - 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
92. ccbl2 4 1 - - - - - - - 1.000 - cysteine conjugate-beta lyase 2, transcript variant X4
93. TSPAN19 TSPAN19 3 1 - - - - - - - 1.000 -
94. CDH8 172 1 - 1.000 - - - - - - - cadherin 8
95. CU571323.1 CU571323.1 7 1 - 1.000 - - - - - - -
96. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 - 1.000 - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
97. si:dkey-13d5.1 si:dkey-13d5.1 3 1 - 1.000 - - - - - - -
98. ACTR3_1 ACTR3_1 2 1 - 1.000 - - - - - - -
99. fam219ab ENSDARG00000013813 591 1 - 1.000 - - - - - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
100. hcst ENSDARG00000092074 172 1 - 1.000 - - - - - - - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]

There are 588 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA