Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-3b8.4

Gene Name Gene ID Reads Annotation
si:dkey-3b8.4 si:dkey-3b8.4 13










Genes with expression patterns similar to si:dkey-3b8.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-3b8.4 si:dkey-3b8.4 13 7 1.000 - 1.000 1.000 1.000 - 1.000 1.000 1.000
2. fnbp1 fnbp1 5 2.73 1.000 - - 0.730 1.000 - - - -
3. AL929220.1 ENSDARG00000103323 14 2.575 0.845 - - 0.730 - - 1.000 - -
4. si:ch211-175f12.2 ENSDARG00000095831 1 2 - - - - 1.000 - 1.000 - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
5. alkbh7 ENSDARG00000037906 9 2 - - - - 1.000 - 1.000 - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
6. mir30b 4 2 1.000 - - - - - 1.000 - - microRNA 30b
7. klc4_1 ENSDARG00000086985 22 2 1.000 - - - - - 1.000 - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
8. efhb ENSDARG00000069703 9 2 - - - - 1.000 - 1.000 - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
9. gper gper 4 1.951 - - - - 0.951 - 1.000 - -
10. C6H21orf58 C6H21orf58 14 1.916 1.000 - - - - - 0.916 - -
11. VSIG10L ENSDARG00000089237 12 1.905 0.905 - - - - - 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
12. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.886 - - 0.886 - - - 1.000 - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
13. si:dkey-104n9.1 ENSDARG00000093042 41 1.858 0.858 - - - - - 1.000 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
14. hnf4g ENSDARG00000071565 117 1.827 0.997 - - - - - 0.830 - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
15. il2rga ENSDARG00000068858, ENSDARG00000110645 32 1.815 - - - - 0.888 - - - 0.927 interleukin 2 receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-080402-1]
16. si:dkeyp-35e5.9 ENSDARG00000103527 24 1.789 0.866 - - - - - 0.923 - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
17. neurod6b ENSDARG00000020794 164 1.78 - - - - 0.780 - 1.000 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
18. ccdc113 ENSDARG00000006981 67 1.773 - - 0.881 - - - 0.892 - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
19. FOLR1 FOLR1 25 1.761 0.761 - - - - - 1.000 - -
20. capsla ENSDARG00000103521 277 1.759 0.860 - - - - - 0.899 - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
21. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1.746 - - - - - - 0.956 - 0.790 si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
22. CT027762.3_1 CT027762.3_1 62 1.744 1.000 - - - - - - - 0.744
23. si:dkey-114c15.5 ENSDARG00000095150 70 1.726 0.892 - - - - - 0.834 - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
24. samsn1b ENSDARG00000078647 8 1.725 - - - - 1.000 - - 0.725 - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
25. CABZ01088933.1 CABZ01088933.1 40 1.708 - - - - 0.827 - 0.881 - -
26. zgc:173770 ENSDARG00000076476 34 1.706 0.905 - - - - - 0.801 - - zgc:173770 [Source:ZFIN;Acc:ZDB-GENE-070822-29]
27. p2rx4b ENSDARG00000042452 14 1.701 - - - - - - 1.000 0.701 - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
28. IGFN1_2 IGFN1_2 3 1.7 - - - - 0.936 - 0.764 - -
29. KCNJ12 KCNJ12 17 1.676 - - 0.890 - - - - 0.786 -
30. wdr65 wdr65 251 1.651 0.735 - - - - - 0.916 - -
31. zgc:173713 17 1.649 0.896 - 0.753 - - - - - - zgc:173713, transcript variant X2
32. GRAMD1B_1 GRAMD1B_1 10 1.644 - - - - - - - 0.818 0.826
33. AL954146.5 AL954146.5 202 1.636 0.921 - - - - - 0.715 - -
34. lrrc48 lrrc48 50 1.635 0.774 - 0.861 - - - - - -
35. si:dkey-217m5.3 si:dkey-217m5.3 22 1.634 - - 0.886 - - - 0.748 - -
36. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.626 0.896 - - 0.730 - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
37. APOL4 APOL4 27 1.612 - - - - - - 0.881 0.731 -
38. irgf3 ENSDARG00000062820 20 1.611 - - - 0.730 - - 0.881 - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
39. C5H9orf117 C5H9orf117 88 1.609 0.701 - - - - - 0.908 - -
40. ggt1b ENSDARG00000018342 49 1.609 0.898 - - - - - 0.711 - - gamma-glutamyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-110408-13]
41. si:dkey-11c5.11 ENSDARG00000096637 130 1.602 0.743 - - - - - 0.859 - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
42. CU693494.3 CU693494.3 169 1.587 - - 0.802 - - - 0.785 - -
43. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 1.584 - - - - - - 0.813 0.771 - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
44. chst12b ENSDARG00000077198, ENSDARG00000094981 15 1.578 - - - - - - 0.785 - 0.793 carbohydrate (chondroitin 4) sulfotransferase 12b [Source:ZFIN;Acc:ZDB-GENE-090312-144]
45. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1.557 - - - 0.707 - - 0.850 - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
46. CT573393.1 CT573393.1 97 1.541 0.723 - 0.818 - - - - - -
47. zgc:174651 zgc:174651 90 1.527 0.781 - - - - - - - 0.746
48. abhd6a ENSDARG00000060756 122 1.522 0.798 - - - - - 0.724 - - abhydrolase domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-090925-1]
49. CCDC176_1 CCDC176_1 126 1.52 0.801 - 0.719 - - - - - -
50. BX511263.1 BX511263.1 64 1.506 0.732 - - - 0.774 - - - -
51. lss ENSDARG00000061274 68 1.499 - - - - - - 0.786 0.713 - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
52. SPAG17 SPAG17 31 1.469 0.739 - - 0.730 - - - - -
53. MAP3K2 ENSDARG00000062884 34 1.427 - - 0.720 0.707 - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
54. ccdc40 ENSDARG00000100584, ENSDARG00000113983 167 1.426 0.725 - - - - - - 0.701 - coiled-coil domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-060503-723]
55. efemp2b ENSDARG00000020811 116 1 - - - - - - 1.000 - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
56. plek ENSDARG00000104325 21 1 - - - - 1.000 - - - - pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506]
57. LRIT3 LRIT3 12 1 - - - - - - 1.000 - -
58. itpr2 ENSDARG00000011909 3 1 - - - - 1.000 - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
59. sftpba ENSDARG00000094708 2 1 - - - - - - 1.000 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
60. rgs13 ENSDARG00000017653 8 1 1.000 - - - - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
61. caps2 ENSDARG00000058486 4 1 1.000 - - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
62. CR356223.3 CR356223.3 0 1 - - - - 1.000 - - - -
63. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1 1.000 - - - - - - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
64. zgc:136902 zgc:136902 4 1 - - - - - - 1.000 - -
65. si:ch211-207e19.13 si:ch211-207e19.13 1 1 - - - - 1.000 - - - -
66. erlec1 ENSDARG00000086309 1 1 - - - - 1.000 - - - - endoplasmic reticulum lectin 1 [Source:ZFIN;Acc:ZDB-GENE-030521-15]
67. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
68. ugt2b3 46 1 1.000 - - - - - - - - UDP glucuronosyltransferase 2 family, polypeptide B3
69. si:dkey-277m11.2 ENSDARG00000094879 15 1 - - - - - - 1.000 - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
70. pdk2 pdk2 32 1 - - - - - - 1.000 - -
71. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - 1.000 - -
72. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - - 1.000 - - - -
73. ZNF337_17 ZNF337_17 12 1 - - - - 1.000 - - - -
74. ccbl2 4 1 - - - - 1.000 - - - - cysteine conjugate-beta lyase 2, transcript variant X4
75. si:dkey-71l1.1 ENSDARG00000052411 11 1 1.000 - - - - - - - - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
76. si:dkey-162h11.2 si:dkey-162h11.2 257 1 1.000 - - - - - - - -
77. si:dkey-242h9.4 4 1 - - - - - - 1.000 - - si:dkey-242h9.4
78. adcy1a ENSDARG00000069026 1 1 - - - - - - 1.000 - - adenylate cyclase 1a [Source:ZFIN;Acc:ZDB-GENE-070705-302]
79. si:ch211-187d1.1 si:ch211-187d1.1 4 1 - - - - - - 1.000 - -
80. rp1 ENSDARG00000077687 18 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
81. CYP46A1 CYP46A1 16 1 1.000 - - - - - - - -
82. USP53 USP53 5 1 1.000 - - - - - - - -
83. nfixa ENSDARG00000043226 14 1 - - - - 1.000 - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
84. UTS2R_1 UTS2R_1 1 1 - - - - 1.000 - - - -
85. si:dkey-179j5.5 ENSDARG00000074538, ENSDARG00000116016, ENSDARG00000116908 1 1 - - - - - - 1.000 - - si:dkey-179j5.5 [Source:ZFIN;Acc:ZDB-GENE-070705-320]
86. BX548021.2 BX548021.2 4 1 - - - - 1.000 - - - -
87. CU570791.1 ENSDARG00000098597 4 1 - - - - - - 1.000 - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
88. si:dkey-105n5.3 si:dkey-105n5.3 9 1 1.000 - - - - - - - -
89. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
90. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - - - 1.000 - -
91. slc2a9l1 ENSDARG00000070672 1 1 - - - - - - 1.000 - - solute carrier family 2 (facilitated glucose transporter), member 9-like 1 [Source:ZFIN;Acc:ZDB-GENE-090915-3]
92. NUGGC NUGGC 9 1 - - - - - - 1.000 - -
93. plscr3a ENSDARG00000093078 7 1 - - - - 1.000 - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
94. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - - 1.000 - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
95. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - - - - 1.000 - -
96. tcf3a ENSDARG00000005915 12 1 1.000 - - - - - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
97. si:ch211-106n13.3 ENSDARG00000052633 3 1 - - - - 1.000 - - - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
98. CR388152.1 CR388152.1 7 1 - - - - - - 1.000 - -
99. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - - 1.000 - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
100. CR548631.2 CR548631.2 0 1 - - - - 1.000 - - - -

There are 1121 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA