Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-3b8.4

Gene Name Gene ID Reads Annotation
si:dkey-3b8.4 si:dkey-3b8.4 13










Genes with expression patterns similar to si:dkey-3b8.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-3b8.4 si:dkey-3b8.4 13 7 1.000 - 1.000 1.000 1.000 - 1.000 1.000 1.000
2. fnbp1 fnbp1 5 2.73 1.000 - - 0.730 1.000 - - - -
3. AL929220.1 ENSDARG00000103323 14 2.575 0.845 - - 0.730 - - 1.000 - -
4. mir30b 4 2 1.000 - - - - - 1.000 - - microRNA 30b
5. si:ch211-175f12.2 ENSDARG00000095831 1 2 - - - - 1.000 - 1.000 - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
6. efhb ENSDARG00000069703 9 2 - - - - 1.000 - 1.000 - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
7. alkbh7 ENSDARG00000037906 9 2 - - - - 1.000 - 1.000 - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
8. klc4_1 ENSDARG00000086985 22 2 1.000 - - - - - 1.000 - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
9. gper gper 4 1.951 - - - - 0.951 - 1.000 - -
10. C6H21orf58 C6H21orf58 14 1.916 1.000 - - - - - 0.916 - -
11. VSIG10L ENSDARG00000089237 12 1.905 0.905 - - - - - 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
12. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.886 - - 0.886 - - - 1.000 - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
13. si:dkey-104n9.1 ENSDARG00000093042 41 1.858 0.858 - - - - - 1.000 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
14. hnf4g ENSDARG00000071565 117 1.827 0.997 - - - - - 0.830 - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
15. il2rga ENSDARG00000068858, ENSDARG00000110645 32 1.815 - - - - 0.888 - - - 0.927 interleukin 2 receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-080402-1]
16. si:dkeyp-35e5.9 ENSDARG00000103527 24 1.789 0.866 - - - - - 0.923 - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
17. neurod6b ENSDARG00000020794 164 1.78 - - - - 0.780 - 1.000 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
18. ccdc113 ENSDARG00000006981 67 1.773 - - 0.881 - - - 0.892 - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
19. FOLR1 FOLR1 25 1.761 0.761 - - - - - 1.000 - -
20. capsla ENSDARG00000103521 277 1.759 0.860 - - - - - 0.899 - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
21. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1.746 - - - - - - 0.956 - 0.790 si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
22. CT027762.3_1 CT027762.3_1 62 1.744 1.000 - - - - - - - 0.744
23. si:dkey-114c15.5 ENSDARG00000095150 70 1.726 0.892 - - - - - 0.834 - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
24. samsn1b ENSDARG00000078647 8 1.725 - - - - 1.000 - - 0.725 - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
25. CABZ01088933.1 CABZ01088933.1 40 1.708 - - - - 0.827 - 0.881 - -
26. zgc:173770 ENSDARG00000076476 34 1.706 0.905 - - - - - 0.801 - - zgc:173770 [Source:ZFIN;Acc:ZDB-GENE-070822-29]
27. p2rx4b ENSDARG00000042452 14 1.701 - - - - - - 1.000 0.701 - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
28. IGFN1_2 IGFN1_2 3 1.7 - - - - 0.936 - 0.764 - -
29. KCNJ12 KCNJ12 17 1.676 - - 0.890 - - - - 0.786 -
30. wdr65 wdr65 251 1.651 0.735 - - - - - 0.916 - -
31. zgc:173713 17 1.649 0.896 - 0.753 - - - - - - zgc:173713, transcript variant X2
32. GRAMD1B_1 GRAMD1B_1 10 1.644 - - - - - - - 0.818 0.826
33. AL954146.5 AL954146.5 202 1.636 0.921 - - - - - 0.715 - -
34. lrrc48 lrrc48 50 1.635 0.774 - 0.861 - - - - - -
35. si:dkey-217m5.3 si:dkey-217m5.3 22 1.634 - - 0.886 - - - 0.748 - -
36. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.626 0.896 - - 0.730 - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
37. APOL4 APOL4 27 1.612 - - - - - - 0.881 0.731 -
38. irgf3 ENSDARG00000062820 20 1.611 - - - 0.730 - - 0.881 - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
39. ggt1b ENSDARG00000018342 49 1.609 0.898 - - - - - 0.711 - - gamma-glutamyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-110408-13]
40. C5H9orf117 C5H9orf117 88 1.609 0.701 - - - - - 0.908 - -
41. si:dkey-11c5.11 ENSDARG00000096637 130 1.602 0.743 - - - - - 0.859 - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
42. CU693494.3 CU693494.3 169 1.587 - - 0.802 - - - 0.785 - -
43. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 1.584 - - - - - - 0.813 0.771 - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
44. chst12b ENSDARG00000077198, ENSDARG00000094981 15 1.578 - - - - - - 0.785 - 0.793 carbohydrate (chondroitin 4) sulfotransferase 12b [Source:ZFIN;Acc:ZDB-GENE-090312-144]
45. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1.557 - - - 0.707 - - 0.850 - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
46. CT573393.1 CT573393.1 97 1.541 0.723 - 0.818 - - - - - -
47. zgc:174651 zgc:174651 90 1.527 0.781 - - - - - - - 0.746
48. abhd6a ENSDARG00000060756 122 1.522 0.798 - - - - - 0.724 - - abhydrolase domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-090925-1]
49. CCDC176_1 CCDC176_1 126 1.52 0.801 - 0.719 - - - - - -
50. BX511263.1 BX511263.1 64 1.506 0.732 - - - 0.774 - - - -
51. lss ENSDARG00000061274 68 1.499 - - - - - - 0.786 0.713 - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
52. SPAG17 SPAG17 31 1.469 0.739 - - 0.730 - - - - -
53. MAP3K2 ENSDARG00000062884 34 1.427 - - 0.720 0.707 - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
54. ccdc40 ENSDARG00000100584, ENSDARG00000113983 167 1.426 0.725 - - - - - - 0.701 - coiled-coil domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-060503-723]
55. ADAD1 ENSDARG00000089181 9 1 - - - - - - 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
56. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
57. U6_24 U6_24 0 1 - - - - 1.000 - - - -
58. FNDC7 FNDC7 0 1 - - - - 1.000 - - - -
59. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
60. ELFN2 ELFN2 7 1 - - - - 1.000 - - - -
61. clrn1 ENSDARG00000102890 5 1 - - - - - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
62. CABZ01049058.1 CABZ01049058.1 7 1 1.000 - - - - - - - -
63. sftpba ENSDARG00000094708 2 1 - - - - - - 1.000 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
64. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1 1.000 - - - - - - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
65. rasal3 ENSDARG00000089933 17 1 1.000 - - - - - - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
66. USP53 USP53 5 1 1.000 - - - - - - - -
67. pla2g4a pla2g4a 7 1 - - - - - - 1.000 - -
68. si:dkey-102m7.3 ENSDARG00000100366 27 1 - - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
69. CABZ01067232.1 ENSDARG00000057408 1 1 - - - - 1.000 - - - - otolin-1-like [Source:NCBI gene;Acc:101886389]
70. si:ch211-106n13.3 ENSDARG00000052633 3 1 - - - - 1.000 - - - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
71. si:dkey-240n22.2 si:dkey-240n22.2 2 1 - - - - 1.000 - - - -
72. si:dkey-16j24.1 2 1 - - - - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
73. si:dkey-277m11.2 ENSDARG00000094879 15 1 - - - - - - 1.000 - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
74. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
75. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - 1.000 - -
76. si:dkey-43k4.4 si:dkey-43k4.4 4 1 - - - - 1.000 - - - -
77. BX004816.4 BX004816.4 33 1 - - - - 1.000 - - - -
78. CABZ01067072.1 CABZ01067072.1 17 1 1.000 - - - - - - - -
79. CR407588.1 ENSDARG00000115460 9 1 - - - - - - 1.000 - - SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
80. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
81. BX321870.1 ENSDARG00000098519 9 1 - - - - - - 1.000 - -
82. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - - 1.000 - - - -
83. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
84. KCNJ3_1 KCNJ3_1 30 1 - - - - 1.000 - - - -
85. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
86. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
87. tcf23 ENSDARG00000087381 6 1 1.000 - - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
88. ggh ENSDARG00000037176 9 1 - - - - - - 1.000 - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
89. tlcd1 ENSDARG00000002391 90 1 1.000 - - - - - - - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]
90. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
91. ppm1na ENSDARG00000010231 3 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
92. TRMT10B ENSDARG00000060176 13 1 - - - - - - 1.000 - - tRNA methyltransferase 10B [Source:ZFIN;Acc:ZDB-GENE-061013-313]
93. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - - - - - 1.000 - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
94. C3H16orf89 C3H16orf89 449 1 1.000 - - - - - - - -
95. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
96. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
97. si:ch211-202a12.8 si:ch211-202a12.8 2 1 - - - - - - 1.000 - -
98. ompb ENSDARG00000032380, ENSDARG00000115093 12 1 - - - - 1.000 - - - - olfactory marker protein b [Source:ZFIN;Acc:ZDB-GENE-030103-1]
99. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - 1.000 - -
100. BX321875.3 ENSDARG00000112569 24 1 - - - - - - 1.000 - -

There are 1121 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA