Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-34e4.1

Gene Name Gene ID Reads Annotation
si:dkey-34e4.1 ENSDARG00000022085 5 si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]










Genes with expression patterns similar to si:dkey-34e4.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-34e4.1 ENSDARG00000022085 5 4 1.000 - 1.000 1.000 1.000 - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
2. si:ch211-274p24.4 ENSDARG00000087088 36 1.809 1.000 - 0.809 - - - - - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
3. MLLT4 MLLT4 67 1.774 1.000 - 0.774 - - - - - -
4. BX119910.3 BX119910.3 7 1.753 1.000 - - - 0.753 - - - -
5. si:dkey-72l14.7 si:dkey-72l14.7 3 1.702 1.000 - - 0.702 - - - - -
6. rpz3 ENSDARG00000069728 11 1.702 - - - 0.702 1.000 - - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
7. zgc:110434_1 30 1.643 0.871 - - - 0.772 - - - - zgc:110434
8. polg ENSDARG00000060951 33 1.634 0.823 - - - 0.811 - - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
9. zp3a.2 ENSDARG00000042130 163 1.614 0.913 - - 0.701 - - - - - zona pellucida glycoprotein 3a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040727-2]
10. SNORD21 SNORD21 17 1.504 0.794 - 0.710 - - - - - -
11. opn1sw1 ENSDARG00000045677 1 1 - - - - 1.000 - - - - opsin 1 (cone pigments), short-wave-sensitive 1 [Source:ZFIN;Acc:ZDB-GENE-991109-25]
12. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
13. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
14. AL935181.2 AL935181.2 9 1 1.000 - - - - - - - -
15. zgc:173652 22 1 - - - - 1.000 - - - - zgc:173652
16. SLC16A7 ENSDARG00000098258 4 1 1.000 - - - - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
17. ENSDARG00000091583 ENSDARG00000091583 0 1 - - - - 1.000 - - - -
18. mamdc2b ENSDARG00000073695 26 1 1.000 - - - - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
19. BX470254.1_1 ENSDARG00000097402 50 1 1.000 - - - - - - - -
20. SNORA38 SNORA38 574 1 1.000 - - - - - - - -
21. NMUR1 NMUR1 30 1 1.000 - - - - - - - -
22. CABZ01040931.1 ENSDARG00000099474 0 1 - - - - 1.000 - - - -
23. CABZ01118678.1 ENSDARG00000091359 2 1 1.000 - - - - - - - - calmodulin-regulated spectrin-associated protein 3-like [Source:NCBI gene;Acc:100007608]
24. si:ch73-155e10.1 si:ch73-155e10.1 13 1 1.000 - - - - - - - -
25. PLB1 PLB1 20 1 - - - - 1.000 - - - -
26. calhm3 ENSDARG00000079602 4 1 - - - - 1.000 - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
27. ddx46 ENSDARG00000099458 24 1 - - - - 1.000 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
28. si:dkey-122c11.4 si:dkey-122c11.4 13 1 1.000 - - - - - - - -
29. si:ch211-79g12.1 ENSDARG00000116692 2 1 - - - - 1.000 - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
30. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 1 1.000 - - - - - - - -
31. CABZ01031627.2 CABZ01031627.2 1 1 - - - - 1.000 - - - -
32. si:dkey-79c1.1 ENSDARG00000093179 11 1 - - - - 1.000 - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
33. ch25hl2 ENSDARG00000038728 100 1 1.000 - - - - - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
34. scn1a 8 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
35. asic4b ENSDARG00000004243 31 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
36. opn5 ENSDARG00000070110 18 1 1.000 - - - - - - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
37. CU693477.1 CU693477.1 7 1 - - - - 1.000 - - - -
38. ebf1b ENSDARG00000069196 64 1 1.000 - - - - - - - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
39. zgc:154054 ENSDARG00000099923 19 1 1.000 - - - - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
40. AL935141.5 AL935141.5 24 1 - - - - 1.000 - - - -
41. si:dkey-29p23.2 ENSDARG00000113192 2 1 - - - - 1.000 - - - - si:dkey-29p23.2 [Source:ZFIN;Acc:ZDB-GENE-110914-51]
42. si:dkey-247m21.3 ENSDARG00000001906 1 1 1.000 - - - - - - - - si:dkey-247m21.3 [Source:ZFIN;Acc:ZDB-GENE-091204-249]
43. MEIS2 MEIS2 3 1 - - - - 1.000 - - - -
44. si:ch211-15j1.1 ENSDARG00000093177 1 1 1.000 - - - - - - - - si:ch211-15j1.1 [Source:ZFIN;Acc:ZDB-GENE-081031-25]
45. CABZ01066717.2 CABZ01066717.2 10 1 1.000 - - - - - - - -
46. scn1a_2 1 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
47. pls1 ENSDARG00000039272 39 1 1.000 - - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
48. glsa ENSDARG00000062812 1 1 - - - - 1.000 - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
49. LRCH4 ENSDARG00000068258 22 1 - - - - 1.000 - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
50. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - 1.000 - - - -
51. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - 1.000 - - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
52. GRM8_1 GRM8_1 85 1 1.000 - - - - - - - -
53. rab3da ENSDARG00000018107 28 1 1.000 - - - - - - - - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
54. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
55. slc5a2 ENSDARG00000100919 47 1 1.000 - - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
56. btbd3a ENSDARG00000005544 595 1 1.000 - - - - - - - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
57. si:ch211-207l22.1 si:ch211-207l22.1 1 1 - - - - 1.000 - - - -
58. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
59. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
60. ROCK2_2 ROCK2_2 0 1 - - - - 1.000 - - - -
61. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - 1.000 - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
62. si:dkey-217f16.3 si:dkey-217f16.3 1 1 1.000 - - - - - - - -
63. scd ENSDARG00000033662 146 1 1.000 - - - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
64. si:dkey-9i23.6 ENSDARG00000094678 58 1 1.000 - - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
65. CABZ01086835.1 ENSDARG00000110902 0 1 - - - - 1.000 - - - - synaptotagmin-4-like [Source:NCBI gene;Acc:101884989]
66. SEMA4D ENSDARG00000067801 5 1 - - - - 1.000 - - - - semaphorin 4D [Source:HGNC Symbol;Acc:HGNC:10732]
67. CR318593.1_1 CR318593.1_1 8 1 1.000 - - - - - - - -
68. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
69. si:dkey-51d8.2 si:dkey-51d8.2 0 1 - - - - 1.000 - - - -
70. BX469930.1 ENSDARG00000092358 3 1 - - - - 1.000 - - - -
71. tmem144b ENSDARG00000036247 2 1 - - - - 1.000 - - - - transmembrane protein 144b [Source:ZFIN;Acc:ZDB-GENE-041010-58]
72. BX928744.1 BX928744.1 15 1 1.000 - - - - - - - -
73. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - - - 1.000 - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
74. CABZ01076817.1 CABZ01076817.1 4 1 - - - - 1.000 - - - -
75. si:dkey-254e13.12 si:dkey-254e13.12 1 1 - - - - 1.000 - - - -
76. BX000999.2 BX000999.2 2353 1 1.000 - - - - - - - -
77. FGFBP3 FGFBP3 993 1 1.000 - - - - - - - -
78. dgcr8 ENSDARG00000035564, ENSDARG00000113898 39 1 - - - - 1.000 - - - - DGCR8 microprocessor complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-3421]
79. si:ch211-272h9.5 ENSDARG00000092167 8 1 - - - - 1.000 - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
80. HIST1H2BA ENSDARG00000116654 10 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
81. tecrl2 tecrl2 11 1 1.000 - - - - - - - -
82. zgc:163077 ENSDARG00000101593 60 1 1.000 - - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
83. si:ch211-113a14.10_1 si:ch211-113a14.10_1 59 1 - - - - 1.000 - - - -
84. GPR22_1 GPR22_1 28 1 1.000 - - - - - - - -
85. BX000477.1 BX000477.1 1 1 - - - - 1.000 - - - -
86. CABZ01076758.1 ENSDARG00000100810 3 1 - - - - 1.000 - - - -
87. mir430c-2 2 1 - - - - 1.000 - - - - microRNA 430c-2
88. si:dkey-179k24.3 si:dkey-179k24.3 3 1 1.000 - - - - - - - -
89. CABZ01081294.1 CABZ01081294.1 1 1 1.000 - - - - - - - -
90. zgc:153704 ENSDARG00000045979 11 1 - - - - 1.000 - - - - zgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
91. greb1l_1 ENSDARG00000039196 8 1 - - - - 1.000 - - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
92. CLCN2 CLCN2 8 1 - - - - 1.000 - - - -
93. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 1.000 - - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
94. si:ch73-211l2.3 ENSDARG00000075932 4 1 - - - - 1.000 - - - - si:ch73-211l2.3 [Source:ZFIN;Acc:ZDB-GENE-081105-52]
95. ptchd4 ENSDARG00000008249 17 1 1.000 - - - - - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
96. suv39h1a ENSDARG00000026799 18 1 - - - - 1.000 - - - - suppressor of variegation 3-9 homolog 1a [Source:ZFIN;Acc:ZDB-GENE-040801-111]
97. me1 ENSDARG00000053215 107 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
98. drd2l ENSDARG00000014858 1 1 1.000 - - - - - - - - dopamine receptor D2 like [Source:ZFIN;Acc:ZDB-GENE-030910-1]
99. ARSI_1 ARSI_1 38 1 1.000 - - - - - - - -
100. or137-1 ENSDARG00000105789 2 1 - - - - 1.000 - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]

There are 588 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA