Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-29j8.5

Gene Name Gene ID Reads Annotation
si:dkey-29j8.5 si:dkey-29j8.5 9










Genes with expression patterns similar to si:dkey-29j8.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-29j8.5 si:dkey-29j8.5 9 7 - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. jak3 ENSDARG00000010252 11 2.269 - - - 0.779 0.788 0.702 - - - Janus kinase 3 (a protein tyrosine kinase, leukocyte) [Source:ZFIN;Acc:ZDB-GENE-070725-4]
3. il10ra ENSDARG00000100383 6 2 - 1.000 - - - 1.000 - - - interleukin 10 receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-070905-4]
4. mcf2lb ENSDARG00000076480 50 2 - 1.000 - - - 1.000 - - - mcf.2 cell line derived transforming sequence-like b [Source:ZFIN;Acc:ZDB-GENE-081104-416]
5. asb11 ENSDARG00000056561 39 2 - 1.000 - 1.000 - - - - - ankyrin repeat and SOCS box containing 11 [Source:ZFIN;Acc:ZDB-GENE-070112-532]
6. socs7_2 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 66 1.873 - 0.873 - - - - 1.000 - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
7. GPR116_3 GPR116_3 9 1.819 - - - 1.000 - - 0.819 - -
8. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1.771 - - 0.771 - - - 1.000 - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
9. MFAP4 ENSDARG00000090783 8 1.761 - 0.761 - - - 1.000 - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
10. SLC4A5 9 1.761 - 0.761 - 1.000 - - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
11. ENSDARG00000095340 ENSDARG00000095340 8 1.727 - 0.956 0.771 - - - - - -
12. cyp2aa2 ENSDARG00000104811 77 1.702 - 1.000 - - - 0.702 - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
13. si:dkey-222f2.6 si:dkey-222f2.6 1 1.702 - 1.000 - - - 0.702 - - -
14. pbx3a ENSDARG00000089262 97 1.692 - - 0.713 - - - 0.979 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
15. pot1 ENSDARG00000079915 42 1.67 - 0.764 - - - 0.906 - - - protection of telomeres 1 homolog [Source:ZFIN;Acc:ZDB-GENE-110324-1]
16. itfg2 ENSDARG00000002174 114 1.633 - 0.756 - - - - 0.877 - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
17. si:ch211-215m21.27 si:ch211-215m21.27 3 1.632 - - - - 0.788 - - - 0.844
18. zgc:174224 ENSDARG00000093875 4 1.63 - 0.851 - - - - 0.779 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
19. pm20d1.1 ENSDARG00000037551 11 1.622 - - - - - 0.843 0.779 - - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
20. WDR63 ENSDARG00000105093 13 1.619 - 0.840 - - - - 0.779 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
21. ptk2ba ENSDARG00000022841 19 1.614 - - - 0.835 - - 0.779 - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
22. XCR1 XCR1 9 1.607 - - - 0.763 - - - - 0.844
23. irx5a ENSDARG00000034043 1694 1.607 - 0.878 0.729 - - - - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
24. TMEM100_1 TMEM100_1 44 1.602 - - 0.711 - - - 0.891 - -
25. BX004873.3 BX004873.3 59 1.595 - - - - - 0.816 0.779 - -
26. si:dkey-258f14.3 ENSDARG00000075974 9 1.591 - - - - - - 0.779 - 0.812 si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
27. rfxank ENSDARG00000016730 12 1.591 - - 0.889 - - 0.702 - - - regulatory factor X-associated ankyrin-containing protein [Source:ZFIN;Acc:ZDB-GENE-050208-596]
28. si:dkey-66i24.10 si:dkey-66i24.10 6 1.575 - 0.873 - - - 0.702 - - -
29. polm ENSDARG00000103470 49 1.575 - 0.873 - - - 0.702 - - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
30. CABZ01015475.1 ENSDARG00000104841 6 1.567 - - - - 0.788 - 0.779 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
31. npas4a ENSDARG00000055752 5 1.567 - - - - 0.788 - 0.779 - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
32. si:ch211-250c4.5 ENSDARG00000075943 10 1.55 - - 0.771 - - - 0.779 - - si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]
33. edar ENSDARG00000099088 1 1.55 - - 0.771 - - - 0.779 - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
34. SIMC1 SIMC1 103 1.55 - 0.840 - 0.710 - - - - -
35. hlcs ENSDARG00000039934 2 1.546 - - - - - 0.702 - - 0.844 holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) [Source:ZFIN;Acc:ZDB-GENE-030131-5333]
36. CHCHD5 ENSDARG00000091754 35 1.54 - 0.772 - - 0.768 - - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
37. spata17 ENSDARG00000054414 64 1.505 - 0.701 - - - 0.804 - - - spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]
38. si:dkey-271j15.3 ENSDARG00000091627 88 1.504 - 0.725 - - - - 0.779 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
39. CU467824.1 CU467824.1 76 1.494 - 0.783 - - - - 0.711 - -
40. PROC PROC 11 1.473 - - 0.771 - - 0.702 - - -
41. HIPK1 HIPK1 8 1.473 - - 0.771 - - 0.702 - - -
42. PEG3_35 PEG3_35 52 1.463 - 0.761 - - - 0.702 - - -
43. F2RL3 ENSDARG00000079399 29 1.423 - - - 0.721 - 0.702 - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
44. fbxw10 ENSDARG00000086484 11 1.42 - - 0.718 - - 0.702 - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
45. mtcl1 ENSDARG00000091408 6 1.408 - - - - - 0.702 - - 0.706 microtubule crosslinking factor 1 [Source:ZFIN;Acc:ZDB-GENE-120508-3]
46. brwd3 ENSDARG00000035540 92 1.404 - - - - - 0.702 0.702 - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
47. si:dkey-240n22.8 ENSDARG00000096001 37 1 - - - - - - 1.000 - - si:dkey-240n22.8 [Source:ZFIN;Acc:ZDB-GENE-110914-150]
48. lratb 3 1 - 1.000 - - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
49. BX571712.3 ENSDARG00000098050 1 1 - 1.000 - - - - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
50. il15l ENSDARG00000007743, ENSDARG00000109605 17 1 - 1.000 - - - - - - - interleukin 15, like [Source:ZFIN;Acc:ZDB-GENE-041111-173]
51. si:ch211-219a15.3 ENSDARG00000087659 12 1 - 1.000 - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
52. arhgap23b ENSDARG00000026840 6 1 - 1.000 - - - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
53. C4H12orf39 C4H12orf39 73 1 - - - - - 1.000 - - -
54. crfb2 ENSDARG00000040332, ENSDARG00000109306, ENSDARG00000116866 21 1 - - - - - - 1.000 - - cytokine receptor family member b2 [Source:ZFIN;Acc:ZDB-GENE-070905-2]
55. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 1 - 1.000 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
56. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1 - 1.000 - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
57. foxf2b ENSDARG00000070389 67 1 - 1.000 - - - - - - - forkhead box F2b [Source:ZFIN;Acc:ZDB-GENE-041001-130]
58. si:ch211-204c5.6 si:ch211-204c5.6 7 1 - - - 1.000 - - - - -
59. AL929580.1 AL929580.1 1 1 - 1.000 - - - - - - -
60. disp2 ENSDARG00000042846 53 1 - 1.000 - - - - - - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
61. exosc4 ENSDARG00000103432 21 1 - 1.000 - - - - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
62. AL928852.1 AL928852.1 23 1 - 1.000 - - - - - - -
63. GJC1 GJC1 44 1 - - - - - - 1.000 - -
64. nek8 ENSDARG00000045626, ENSDARG00000117017 67 1 - - - - - - 1.000 - - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
65. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 - 1.000 - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
66. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - 1.000 - - - - - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
67. KSR1 KSR1 8 1 - 1.000 - - - - - - -
68. cyp3c1l2 cyp3c1l2 53 1 - 1.000 - - - - - - -
69. SNORA7 SNORA7 100 1 - 1.000 - - - - - - -
70. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 - 1.000 - - - - - - -
71. si:ch211-67f13.8 ENSDARG00000079155 7 1 - 1.000 - - - - - - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
72. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - 1.000 - - - - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
73. mrc1b ENSDARG00000038822 73 1 - 1.000 - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
74. PEG3_9 PEG3_9 3 1 - 1.000 - - - - - - -
75. zgc:112234_4 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 1 1 - - - 1.000 - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
76. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1 - - - - - - 1.000 - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
77. btr09 ENSDARG00000054805, ENSDARG00000115798 20 1 - 1.000 - - - - - - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
78. NDUFA4L2 1 1 - 1.000 - - - - - - - NDUFA4, mitochondrial complex associated like 2
79. si:ch211-110p13.9 ENSDARG00000093821 82 1 - 1.000 - - - - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
80. si:dkey-56e5.2 si:dkey-56e5.2 14 1 - 1.000 - - - - - - -
81. hist2h3c_1 ENSDARG00000094154 45 1 - 1.000 - - - - - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
82. DNASE2B ENSDARG00000077918 1 1 - - - 1.000 - - - - - deoxyribonuclease II beta [Source:ZFIN;Acc:ZDB-GENE-090824-2]
83. TXNRD2 TXNRD2 14 1 - 1.000 - - - - - - -
84. si:ch211-136m16.8 ENSDARG00000090767 91 1 - 1.000 - - - - - - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
85. TSPEAR TSPEAR 9 1 - - - 1.000 - - - - -
86. si:dkey-206f10.1 ENSDARG00000032838 18 1 - 1.000 - - - - - - - si:dkey-206f10.1 [Source:ZFIN;Acc:ZDB-GENE-041014-154]
87. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - - 1.000 - - - - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
88. irx6a ENSDARG00000034420 29 1 - 1.000 - - - - - - - iroquois homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040712-5]
89. BX005364.1 ENSDARG00000092439 1 1 - 1.000 - - - - - - -
90. cbln2b ENSDARG00000077151 38 1 - 1.000 - - - - - - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
91. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1 - - - - - - 1.000 - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
92. nfasca ENSDARG00000061099, ENSDARG00000109524 275 1 - - - - - - 1.000 - - neurofascin homolog (chicken) a [Source:ZFIN;Acc:ZDB-GENE-080229-6]
93. kcnh2 kcnh2 76 1 - 1.000 - - - - - - -
94. si:dkey-126h10.2 si:dkey-126h10.2 3 1 - - - 1.000 - - - - -
95. si:ch211-278p9.1 ENSDARG00000087532 18 1 - - - 1.000 - - - - - si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
96. fancm ENSDARG00000103933 1 1 - 1.000 - - - - - - - FA complementation group M [Source:ZFIN;Acc:ZDB-GENE-090929-1]
97. pxn pxn 10 1 - 1.000 - - - - - - -
98. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 1 - 1.000 - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
99. C6H21orf58 C6H21orf58 14 1 - 1.000 - - - - - - -
100. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 - 1.000 - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]

There are 1229 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA