Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-29j8.3

Gene Name Gene ID Reads Annotation
si:dkey-29j8.3 1288 si:dkey-29j8.3, transcript variant X2










Genes with expression patterns similar to si:dkey-29j8.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-29j8.3 1288 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-29j8.3, transcript variant X2
2. vac14 ENSDARG00000014303 941 1.908 - 0.918 - - - 0.990 - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
3. tcf7l1a ENSDARG00000038159 2288 1.746 - - - - - 0.989 0.757 - - transcription factor 7 like 1a [Source:ZFIN;Acc:ZDB-GENE-980605-30]
4. C9H2orf76 C9H2orf76 559 1.745 - 0.754 - - - 0.991 - - -
5. GPR108 ENSDARG00000096651 1734 1.724 - - - - - 0.993 0.731 - - G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
6. parn ENSDARG00000102634 2049 1.72 - - - - - 0.990 0.730 - - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
7. dnajb12b ENSDARG00000087473 3811 1.706 - - - - - 0.983 0.723 - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
8. clip2 ENSDARG00000059596 529 1.703 - - - 0.710 - 0.993 - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
9. trim33 ENSDARG00000016181 1718 1.571 - 0.764 - - - - 0.807 - - tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
10. zgc:110319 ENSDARG00000021404, ENSDARG00000116214 1016 1.543 - 0.757 - - - - 0.786 - - zgc:110319 [Source:ZFIN;Acc:ZDB-GENE-050417-345]
11. GUSB ENSDARG00000063126 2712 1.536 - 0.755 - - - - 0.781 - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
12. sec23a ENSDARG00000104230 3910 1.534 - 0.737 - - - - 0.797 - - Sec23 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2823]
13. RPS6KC1 ENSDARG00000104103 746 1.499 - 0.728 - - - - 0.771 - - ribosomal protein S6 kinase polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-081031-83]
14. dsc2l ENSDARG00000039677 2747 1.489 - 0.718 - - - - 0.771 - - desmocollin 2 like [Source:ZFIN;Acc:ZDB-GENE-031116-55]
15. gkap1 ENSDARG00000068123 2645 1.477 - 0.776 - - - - 0.701 - - G kinase anchoring protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2485]
16. ccdc102a ENSDARG00000003872 791 1.455 0.719 0.736 - - - - - - - coiled-coil domain containing 102A [Source:ZFIN;Acc:ZDB-GENE-030131-4044]
17. mmp2 ENSDARG00000017676 2347 1.444 - 0.743 - - - - 0.701 - - matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
18. mpi ENSDARG00000030786 3052 0.995 - - - - - 0.995 - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
19. sf3b4 ENSDARG00000018574 7470 0.995 - - - - - 0.995 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
20. creg2 ENSDARG00000000666 643 0.994 - - - - - 0.994 - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
21. SMARCA1 ENSDARG00000012776 673 0.994 - - - - - 0.994 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
22. olfml2a ENSDARG00000005648 1157 0.994 - - - - - 0.994 - - - olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
23. rcan2 ENSDARG00000021869 874 0.994 - - - - - 0.994 - - - regulator of calcineurin 2 [Source:ZFIN;Acc:ZDB-GENE-040516-17]
24. abat ENSDARG00000006031 2143 0.994 - - - - - 0.994 - - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
25. impdh2 ENSDARG00000006900 3197 0.994 - - - - - 0.994 - - - IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030114-5]
26. FP102157.1 FP102157.1 1096 0.994 - - - - - 0.994 - - -
27. tfg ENSDARG00000003641, ENSDARG00000115188 3834 0.993 - - - - - 0.993 - - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
28. trim44 ENSDARG00000051761 509 0.993 - - - - - 0.993 - - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
29. stxbp3 ENSDARG00000008142 2604 0.993 - - - - - 0.993 - - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
30. rab1ba ENSDARG00000058044 5080 0.993 - - - - - 0.993 - - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
31. CASKIN2_1 CASKIN2_1 2299 0.993 - - - - - 0.993 - - -
32. las1l ENSDARG00000062457, ENSDARG00000114475 3987 0.993 - - - - - 0.993 - - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
33. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.993 - - - - - 0.993 - - -
34. yes1 ENSDARG00000005941 3577 0.993 - - - - - 0.993 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
35. pank2 ENSDARG00000003311 881 0.993 - - - - - 0.993 - - - pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
36. si:ch211-163l21.8 ENSDARG00000042899 724 0.993 - - - - - 0.993 - - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
37. PRIM2 ENSDARG00000052721 825 0.992 - - - - - 0.992 - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
38. rc3h1 rc3h1 1087 0.992 - - - - - 0.992 - - -
39. CREM CREM 1333 0.992 - - - - - 0.992 - - -
40. amt ENSDARG00000010862, ENSDARG00000113280 367 0.992 - - - - - 0.992 - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
41. sec63 ENSDARG00000017740 3789 0.992 - - - - - 0.992 - - - SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
42. xirp1 ENSDARG00000030722 1486 0.992 - - - - - 0.992 - - - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
43. TRIM35_3 TRIM35_3 172 0.992 - - - - - 0.992 - - -
44. FAR2 FAR2 1459 0.992 - - - - - 0.992 - - -
45. si:ch73-375g18.1 ENSDARG00000075024 2431 0.992 - - - - - 0.992 - - - si:ch73-375g18.1 [Source:ZFIN;Acc:ZDB-GENE-110408-56]
46. si:dkey-3d4.3 ENSDARG00000074079 365 0.992 - - - - - 0.992 - - - si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
47. pbxip1b ENSDARG00000011824 3726 0.992 - - - - - 0.992 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
48. uggt1 ENSDARG00000054746 2060 0.992 - - - - - 0.992 - - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-619]
49. si:ch211-160e1.5 5586 0.992 - - - - - 0.992 - - - si:ch211-160e1.5
50. eva1a ENSDARG00000061405 896 0.992 - - - - - 0.992 - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
51. dfna5 dfna5 361 0.992 - - - - - 0.992 - - -
52. ctsf ENSDARG00000063095 4564 0.992 - - - - - 0.992 - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
53. triqk ENSDARG00000076296 1274 0.992 - - - - - 0.992 - - - triple QxxK/R motif containing [Source:ZFIN;Acc:ZDB-GENE-070705-75]
54. kdrl ENSDARG00000105215 766 0.991 - - - - - 0.991 - - - kinase insert domain receptor like [Source:ZFIN;Acc:ZDB-GENE-000705-1]
55. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.991 - - - - - 0.991 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
56. zgc:112484 zgc:112484 780 0.991 - - - - - 0.991 - - -
57. VPS37C ENSDARG00000031836 906 0.991 - - - - - 0.991 - - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
58. fktn ENSDARG00000059437, ENSDARG00000109351 340 0.991 - - - - - 0.991 - - - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
59. pld2 ENSDARG00000034262 952 0.991 - - - - - 0.991 - - - phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
60. itpkb ENSDARG00000010059 2352 0.991 - - - - - 0.991 - - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
61. zmynd8 ENSDARG00000007601 405 0.991 - - - - - 0.991 - - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]
62. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.991 - - - - - 0.991 - - - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
63. mcts1 ENSDARG00000025972 4662 0.991 - - - - - 0.991 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
64. cyb561a3a ENSDARG00000056281 667 0.991 - - - - - 0.991 - - - cytochrome b561 family, member A3a [Source:ZFIN;Acc:ZDB-GENE-060526-374]
65. mrpl41 ENSDARG00000002264 1756 0.991 - - - - - 0.991 - - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
66. nog2 ENSDARG00000043066 233 0.991 - - - - - 0.991 - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
67. pgm2 ENSDARG00000018178 985 0.991 - - - - - 0.991 - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
68. tdrd3 ENSDARG00000025421 633 0.991 - - - - - 0.991 - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
69. pes ENSDARG00000018902 3286 0.991 - - - - - 0.991 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
70. ociad1 ENSDARG00000052334 2797 0.991 - - - - - 0.991 - - - OCIA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1100]
71. klhl41a ENSDARG00000068888 1034 0.991 - - - - - 0.991 - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
72. SLC6A16 SLC6A16 630 0.99 - - - - - 0.990 - - -
73. cxxc5a ENSDARG00000078865 3447 0.99 - - - - - 0.990 - - - CXXC finger protein 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3178]
74. yipf1 ENSDARG00000014474 542 0.99 - - - - - 0.990 - - - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
75. mst4 mst4 1672 0.99 - - - - - 0.990 - - -
76. hdac9b ENSDARG00000056642 1148 0.99 - - - - - 0.990 - - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
77. zmat5 ENSDARG00000035434 983 0.99 - - - - - 0.990 - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
78. lap3 ENSDARG00000061981 1188 0.99 - - - - - 0.990 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
79. pdlim5b ENSDARG00000027600 4252 0.99 - - - - - 0.990 - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
80. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 0.99 - - - - - 0.990 - - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
81. rbm42 ENSDARG00000039910 1111 0.99 - - - - - 0.990 - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
82. zfyve21 ENSDARG00000027887 1687 0.99 - - - - - 0.990 - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
83. ppp2r2a ppp2r2a 5785 0.99 - - - - - 0.990 - - -
84. tmem134 ENSDARG00000024828 3241 0.99 - - - - - 0.990 - - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
85. sh3yl1 ENSDARG00000074393 815 0.99 - - - - - 0.990 - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
86. BRCC3 ENSDARG00000098242 1123 0.99 - - - - - 0.990 - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
87. rhebl1 ENSDARG00000039162 3966 0.99 - - - - - 0.990 - - - Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
88. pdgfaa ENSDARG00000109371, ENSDARG00000110069, ENSDARG00000115665 2120 0.99 - - - - - 0.990 - - - platelet-derived growth factor alpha polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030918-2]
89. zgc:63637 zgc:63637 3636 0.989 - - - - - 0.989 - - -
90. rabgef1 ENSDARG00000014430 1176 0.989 - - - - - 0.989 - - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
91. twf1a ENSDARG00000115712 3465 0.989 - - - - - 0.989 - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
92. ptp4a2 ptp4a2 3196 0.989 - - - - - 0.989 - - -
93. si:dkey-11e23.5 si:dkey-11e23.5 3464 0.989 - - - - - 0.989 - - -
94. ndufv2 ENSDARG00000013044 3758 0.989 - - - - - 0.989 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
95. tnni2b.2 ENSDARG00000029995 935 0.989 - - - - - 0.989 - - - troponin I type 2b (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-9]
96. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 0.989 - - - - - 0.989 - - - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
97. PLEKHG4 ENSDARG00000075964 2860 0.989 - - - - - 0.989 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
98. canx ENSDARG00000037488 4328 0.989 - - - - - 0.989 - - - calnexin [Source:ZFIN;Acc:ZDB-GENE-040426-2797]
99. rps6kb1b ENSDARG00000058230, ENSDARG00000115202 2565 0.989 - - - - - 0.989 - - - ribosomal protein S6 kinase b, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2038]
100. flot2b ENSDARG00000069774 2831 0.989 - - - - - 0.989 - - - flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]

There are 594 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA