Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-28d5.2

Gene Name Gene ID Reads Annotation
si:dkey-28d5.2 si:dkey-28d5.2 2










Genes with expression patterns similar to si:dkey-28d5.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-28d5.2 si:dkey-28d5.2 2 2 - - - - - - 1.000 1.000 -
2. mthfsd ENSDARG00000062042 34 1.831 - - - - - - 1.000 0.831 - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
3. ubtd1b ENSDARG00000079623 26 1.785 - - - - - - 1.000 0.785 - ubiquitin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050913-62]
4. sema3h ENSDARG00000042616 75 1.759 - - - - - - 1.000 0.759 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
5. si:dkey-147f3.8 ENSDARG00000092166 28 1.414 - - - - - - 0.711 0.703 - si:dkey-147f3.8 [Source:ZFIN;Acc:ZDB-GENE-061009-32]
6. BX537350.1 BX537350.1 8 1 - - - - - - 1.000 - -
7. si:ch73-388k15.1 si:ch73-388k15.1 0 1 - - - - - - 1.000 - -
8. RNaseP_nuc_1 RNaseP_nuc_1 19 1 - - - - - - 1.000 - -
9. si:ch211-139g16.8 ENSDARG00000093074 13 1 - - - - - - 1.000 - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
10. CR354540.1 ENSDARG00000004051 10 1 - - - - - - 1.000 - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
11. CABZ01079804.1 ENSDARG00000117619 1 1 - - - - - - 1.000 - -
12. RBBP6_2 RBBP6_2 23 1 - - - - - - 1.000 - -
13. SLC2A4RG SLC2A4RG 47 1 - - - - - - 1.000 - -
14. flt3 ENSDARG00000058503 32 1 - - - - - - 1.000 - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
15. BX664625.1 ENSDARG00000043131 8 1 - - - - - - 1.000 - - natural killer cell receptor 2B4-like [Source:NCBI gene;Acc:100007935]
16. def8 ENSDARG00000068208 50 1 - - - - - - 1.000 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
17. TNFSF14 ENSDARG00000111357 2 1 - - - - - - 1.000 - - TNF superfamily member 14 [Source:ZFIN;Acc:ZDB-GENE-101109-3]
18. mocs1 ENSDARG00000078479 1 1 - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:ZFIN;Acc:ZDB-GENE-130215-1]
19. si:dkey-6o1.2 si:dkey-6o1.2 12 1 - - - - - - 1.000 - -
20. cep68 ENSDARG00000039411 30 1 - - - - - - 1.000 - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
21. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - - - - - - 1.000 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
22. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - - 1.000 - -
23. HEPACAM ENSDARG00000112032 1 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
24. amn ENSDARG00000062947 36 1 - - - - - - 1.000 - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
25. CABZ01080074.1 ENSDARG00000076371 0 1 - - - - - - 1.000 - - shroom family member 2b [Source:NCBI gene;Acc:556551]
26. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1 - - - - - - 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
27. fbxo36b ENSDARG00000039152 7 1 - - - - - - 1.000 - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
28. fabp10a ENSDARG00000038439 4 1 - - - - - - 1.000 - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
29. fech ENSDARG00000003462 212 1 - - - - - - 1.000 - - ferrochelatase [Source:ZFIN;Acc:ZDB-GENE-000928-1]
30. DGKA DGKA 8 1 - - - - - - 1.000 - -
31. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
32. nudt4b ENSDARG00000045878 10 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
33. try 21 1 - - - - - - 1.000 - - trypsin
34. has1 ENSDARG00000042983 2 1 - - - - - - 1.000 - - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]
35. sycp1 ENSDARG00000003904 8 1 - - - - - - 1.000 - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
36. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - - - - - 1.000 - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
37. tuba7l ENSDARG00000104643 33 1 - - - - - - 1.000 - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
38. CU633991.1 CU633991.1 16 1 - - - - - - 1.000 - -
39. TRIM35_1 TRIM35_1 11 1 - - - - - - 1.000 - -
40. CABZ01076234.1 CABZ01076234.1 49 1 - - - - - - 1.000 - -
41. VWDE ENSDARG00000103443 10 1 - - - - - - 1.000 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
42. si:dkey-119p2.1 si:dkey-119p2.1 1 1 - - - - - - 1.000 - -
43. RDM1 RDM1 28 1 - - - - - - 1.000 - -
44. BX470200.1 BX470200.1 1 1 - - - - - - 1.000 - -
45. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - - 1.000 - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
46. taar20t ENSDARG00000095035 1 1 - - - - - - 1.000 - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
47. CU367845.1_1 CU367845.1_1 43 1 - - - - - - 1.000 - -
48. si:dkey-16p6.1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 0 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
49. mipol1 ENSDARG00000104845 6 1 - - - - - - 1.000 - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
50. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
51. agxta ENSDARG00000052099 65 1 - - - - - - 1.000 - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
52. ptger4a ENSDARG00000059236 13 1 - - - - - - 1.000 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
53. BX511266.1 BX511266.1 21 1 - - - - - - 1.000 - -
54. C1S_1 C1S_1 11 1 - - - - - - 1.000 - -
55. RBBP6_9 RBBP6_9 1 1 - - - - - - 1.000 - -
56. MAL2_1 MAL2_1 6 1 - - - - - - 1.000 - -
57. zgc:136461 ENSDARG00000093844, ENSDARG00000114728 1 1 - - - - - - 1.000 - - zgc:136461 [Source:ZFIN;Acc:ZDB-GENE-060519-7]
58. si:ch211-271g18.4 ENSDARG00000115564 197 1 - - - - - - 1.000 - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
59. irf10 ENSDARG00000027658 7 1 - - - - - - 1.000 - - interferon regulatory factor 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2084]
60. CU694372.1 ENSDARG00000097988 105 1 - - - - - - 1.000 - -
61. CR848029.1 CR848029.1 1 1 - - - - - - 1.000 - -
62. si:dkey-267i17.3 si:dkey-267i17.3 4 1 - - - - - - 1.000 - -
63. tmem86b ENSDARG00000038296 3 1 - - - - - - 1.000 - - transmembrane protein 86B [Source:ZFIN;Acc:ZDB-GENE-060825-132]
64. CDHR5 CDHR5 2 1 - - - - - - 1.000 - -
65. mettl8 ENSDARG00000017359 36 1 - - - - - - 1.000 - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
66. tet1 ENSDARG00000075230, ENSDARG00000110764 8 1 - - - - - - 1.000 - - tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
67. si:dkey-14d8.19 si:dkey-14d8.19 12 1 - - - - - - 1.000 - -
68. ifit2 ifit2 11 1 - - - - - - 1.000 - -
69. st6galnac1.2 ENSDARG00000043816 51 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
70. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - - 1.000 - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
71. DDO DDO 0 1 - - - - - - 1.000 - -
72. ccdc85a ENSDARG00000039497 24 1 - - - - - - 1.000 - - coiled-coil domain containing 85A [Source:ZFIN;Acc:ZDB-GENE-080220-55]
73. GSC2 GSC2 3 1 - - - - - - 1.000 - -
74. si:dkey-26i13.6 ENSDARG00000092200 3 1 - - - - - - 1.000 - - si:dkey-26i13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-165]
75. CDK18 ENSDARG00000012204 5 1 - - - - - - 1.000 - - cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
76. grapa ENSDARG00000005414 29 1 - - - - - - 1.000 - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
77. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - - - - - 1.000 - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
78. si:dkey-276l13.3 si:dkey-276l13.3 8 1 - - - - - - 1.000 - -
79. si:dkey-14o18.3 si:dkey-14o18.3 5 1 - - - - - - 1.000 - -
80. zgc:194659 ENSDARG00000079347 17 1 - - - - - - 1.000 - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
81. Telomerase-vert Telomerase-vert 8 1 - - - - - - 1.000 - -
82. zte25 zte25 29 1 - - - - - - 1.000 - -
83. glipr1b ENSDARG00000030078 73 1 - - - - - - 1.000 - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
84. cul4a ENSDARG00000096578 14 1 - - - - - - 1.000 - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
85. zgc:173577 ENSDARG00000098923 71 1 - - - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
86. ppfia2 ENSDARG00000013000 45 1 - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
87. SIRT4 ENSDARG00000010415 118 1 - - - - - - 1.000 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]
88. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - - - 1.000 - -
89. lctlb ENSDARG00000016337 35 1 - - - - - - 1.000 - - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
90. BX649292.1 ENSDARG00000092686 1 1 - - - - - - 1.000 - -
91. SLC4A5 9 1 - - - - - - 1.000 - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
92. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - 1.000 - -
93. ENSDARG00000029117 ENSDARG00000029117 80 1 - - - - - - 1.000 - -
94. SLC7A8 SLC7A8 25 1 - - - - - - 1.000 - -
95. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1 - - - - - - 1.000 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
96. TRPC4 TRPC4 18 1 - - - - - - 1.000 - -
97. ms4a17a.4 ENSDARG00000014024 36 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.4 [Source:ZFIN;Acc:ZDB-GENE-070822-16]
98. sinup ENSDARG00000017163 5 1 - - - - - - 1.000 - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
99. stx17 ENSDARG00000006869 24 1 - - - - - - 1.000 - - syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]
100. zgc:152968 ENSDARG00000037002 6 1 - - - - - - 1.000 - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]

There are 398 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA