Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:dkey-28b4.8

Gene Name Gene ID Reads Annotation
si:dkey-28b4.8 ENSDARG00000002840 1277 si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]










Genes with expression patterns similar to si:dkey-28b4.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-28b4.8 ENSDARG00000002840 1277 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
2. slc18a3a ENSDARG00000006356 1285 2.63 - - - - 0.892 0.927 0.811 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
3. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.628 - - - - 0.936 0.863 0.829 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
4. si:ch211-278j3.3 ENSDARG00000020284 478 2.623 - - - - 0.950 0.815 0.858 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
5. gng3 ENSDARG00000009553 2530 2.574 - - - - 0.890 0.872 0.812 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
6. CBFA2T3 ENSDARG00000079012 6799 2.569 0.939 - - - - 0.855 0.775 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
7. stx1b ENSDARG00000000503 2724 2.55 - - 0.764 - - 0.938 0.848 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
8. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.544 - - - - - 0.919 0.852 - 0.773 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
9. dnajc5aa ENSDARG00000042948 2885 2.521 - - - - - 0.952 0.855 - 0.714 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
10. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.497 - - - - - 0.951 0.841 0.705 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
11. rab3ab ENSDARG00000043835 1267 2.484 - - - - - 0.894 0.843 0.747 - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
12. cadm3 ENSDARG00000057013 1545 2.463 - - - - - 0.889 0.842 - 0.732 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
13. tuba1c ENSDARG00000055216 8384 2.457 - - - - - 0.905 0.833 - 0.719 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
14. celf3a ENSDARG00000034668 2432 2.456 - - - - 0.859 0.877 - - 0.720 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
15. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.455 - - - - 0.727 0.916 0.812 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
16. lhx1a ENSDARG00000014018 958 2.453 - - - - - 0.900 0.827 - 0.726 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
17. her8a ENSDARG00000016363 996 2.448 - - - - 0.823 0.758 0.867 - - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
18. nrn1a ENSDARG00000071860 1311 2.443 - - - - 0.905 0.781 0.757 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
19. ZFHX3 ENSDARG00000103057 7759 2.432 - 0.725 - - - 0.860 0.847 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
20. wasf3 wasf3 3287 2.428 - - - - 0.829 0.866 0.733 - -
21. onecutl ENSDARG00000040253 2143 2.424 - 0.841 - - - 0.761 0.822 - - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
22. mycla ENSDARG00000006003 1866 2.417 - - - - 0.944 - 0.757 0.716 - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
23. tmem35 ENSDARG00000052567 5685 2.415 - - - - - 0.885 0.761 - 0.769 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
24. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.401 - - - - - 0.914 0.736 - 0.751 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
25. her15.2 her15.2 1701 2.374 0.932 - - - 0.736 - 0.706 - -
26. nrarpb ENSDARG00000018958 6225 2.373 - - - - - 0.850 0.807 - 0.716 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
27. tox ENSDARG00000032317 9126 2.37 - - - - - 0.820 0.794 - 0.756 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
28. dpysl5a ENSDARG00000011141 1827 2.357 - - - - - 0.753 0.851 - 0.753 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
29. mybl2 mybl2 1341 2.338 0.926 0.705 - - - - - 0.707 -
30. nkain1 ENSDARG00000006859 1961 2.328 - - - - - 0.853 0.757 - 0.718 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
31. mllt11 ENSDARG00000071026 2518 2.315 - - - - - 0.884 0.725 - 0.706 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
32. marcksa ENSDARG00000004049 2518 2.314 - - - - - 0.854 0.736 - 0.724 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
33. negr1 ENSDARG00000021607 1051 2.314 - - - - - 0.872 0.715 - 0.727 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
34. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.3 - - - - - 0.789 0.811 - 0.700 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
35. her2 ENSDARG00000038205 3219 2.297 - - - - 0.707 0.777 0.813 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
36. st8sia2 ENSDARG00000018788 2183 2.296 - - - - 0.777 0.766 0.753 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
37. hnrnpub ENSDARG00000004735 16496 2.274 - - - - - 0.754 0.776 - 0.744 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
38. evx2 ENSDARG00000059255 317 2.266 - - - - - 0.774 0.783 - 0.709 even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
39. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 2.258 - - - - - 0.816 0.724 - 0.718 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
40. st18 663 2.25 - - - - - 0.786 0.741 - 0.723 suppression of tumorigenicity 18, zinc finger
41. snrpa ENSDARG00000018890 4593 2.223 - 0.782 - - - 0.720 - - 0.721 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
42. lphn3.1 lphn3.1 756 2.208 - - - - - 0.740 0.767 0.701 -
43. scocb ENSDARG00000002217 1844 2.205 - 0.701 - - - 0.758 0.746 - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
44. kdm2aa ENSDARG00000059653 2389 2.197 - - - - 0.756 - 0.721 - 0.720 lysine (K)-specific demethylase 2Aa [Source:ZFIN;Acc:ZDB-GENE-061215-144]
45. sumo3a ENSDARG00000028119 13447 2.193 - - - - - 0.775 0.714 - 0.704 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
46. usp49 ENSDARG00000000229 706 1.844 0.938 - - - 0.906 - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
47. ttll4 ENSDARG00000078935 1663 1.83 0.898 - - - 0.932 - - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
48. vsnl1b ENSDARG00000044053 1120 1.819 - - - - - 0.958 0.861 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
49. cpsf5 cpsf5 1841 1.818 0.923 - - - 0.895 - - - -
50. lgi2a ENSDARG00000111069 965 1.799 - - - - 0.948 0.851 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
51. si:ch211-120j21.1 si:ch211-120j21.1 638 1.797 0.884 - - - 0.913 - - - -
52. sh3yl1 ENSDARG00000074393 815 1.795 0.879 - - - 0.916 - - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
53. pax6a ENSDARG00000103379 3061 1.79 - - - - - 0.943 0.847 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
54. sh3gl2 sh3gl2 1305 1.788 - - - - - 0.901 0.887 - -
55. clstn3 ENSDARG00000073883 590 1.785 - - - - - 0.943 0.842 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
56. nell2b ENSDARG00000062797 854 1.783 - - - - - 0.947 0.836 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
57. spock3 ENSDARG00000070266, ENSDARG00000110158 934 1.783 - - - - - 0.872 0.911 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
58. cdk5r1b ENSDARG00000045087 2075 1.782 - - - - - 0.950 0.832 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
59. EPB41L1 EPB41L1 1896 1.778 - - - - - 0.933 0.845 - -
60. INA INA 950 1.777 - - - - - 0.931 0.846 - -
61. tmeff1b ENSDARG00000056740 11253 1.777 - - - - - 0.891 0.886 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
62. dhdds ENSDARG00000039851 1135 1.776 - 0.855 - - 0.921 - - - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
63. wu:fq41a10 wu:fq41a10 7009 1.77 - - - - 0.865 - 0.905 - -
64. FP016176.1 FP016176.1 7030 1.763 - - - - - 0.879 0.884 - -
65. itm2ca ENSDARG00000043448 1265 1.761 - - - - - 0.953 0.808 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
66. CR626962.1 ENSDARG00000096981 220 1.761 - - - - 0.938 - 0.823 - -
67. kcnc3a ENSDARG00000055855 1821 1.758 - - - - - 0.919 0.839 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
68. rbfox3 rbfox3 1443 1.757 - - - - - 0.895 0.862 - -
69. pi4k2b ENSDARG00000013881 1337 1.757 0.833 - - - 0.924 - - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
70. JPH3 ENSDARG00000102204 283 1.756 - - - - 0.929 0.827 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
71. psma4 ENSDARG00000045928 5112 1.756 0.874 - - - 0.882 - - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
72. hoxa9b ENSDARG00000056819 3081 1.756 - - - - - 0.914 0.842 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
73. nova2 ENSDARG00000017673 7685 1.756 - - - - - 0.948 0.808 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
74. gsx1 ENSDARG00000035735 1243 1.75 - - - - - 0.918 0.832 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
75. eva1ba ENSDARG00000102701 1480 1.749 0.855 - - - 0.894 - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
76. STMN3 ENSDARG00000038465 1009 1.749 - - - - - 0.903 0.846 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
77. fgf13b ENSDARG00000056633 455 1.748 - - - - - 0.909 0.839 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
78. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 1.744 - - - - 0.927 0.817 - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
79. ube2f ENSDARG00000025754 1946 1.743 0.871 - - - 0.872 - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
80. dpysl3 ENSDARG00000002587 4381 1.742 - - - - - 0.922 0.820 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
81. pcp4b 1080 1.741 - - - - - 0.900 0.841 - - Purkinje cell protein 4b
82. leo1 ENSDARG00000055357 1644 1.741 0.898 - - - 0.843 - - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
83. gfap ENSDARG00000025301 5584 1.741 - - - - - 0.907 0.834 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
84. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.738 - - - - - 0.933 0.805 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
85. slc1a2b ENSDARG00000102453 3136 1.736 - - - - - 0.873 0.863 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
86. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.735 - - - - - 0.918 0.817 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
87. epha4b ENSDARG00000011600 3110 1.735 - - - - - 0.910 0.825 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
88. hmgb3a ENSDARG00000056725 15668 1.733 - - - - - 0.894 0.839 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
89. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.732 - - - - - 0.900 0.832 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
90. grin1a ENSDARG00000027828 1327 1.729 - - - - - 0.918 0.811 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
91. msi1 ENSDARG00000010710 2634 1.728 - - - - - 0.909 0.819 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
92. AGO1 ENSDARG00000092644 4521 1.727 - - - - - 0.931 0.796 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
93. scn8aa ENSDARG00000005775 792 1.727 - - - - - 0.900 0.827 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
94. sall3b ENSDARG00000057586 982 1.727 - - - - - 0.905 0.822 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
95. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 1.727 - - - - - 0.865 0.862 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
96. UBE2QL1 ENSDARG00000079276 3474 1.727 - - - - - 0.908 0.819 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
97. nova1 ENSDARG00000020178 4129 1.727 - - - - - 0.884 0.843 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
98. slc8a2b ENSDARG00000100592 598 1.727 - - - - - 0.892 0.835 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
99. TUBA1A ENSDARG00000001889 25294 1.725 - - - - - 0.923 0.802 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
100. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.724 - - - - - 0.870 0.854 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]

There are 2419 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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