Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-27f16.4

Gene Name Gene ID Reads Annotation
si:dkey-27f16.4 si:dkey-27f16.4 4










Genes with expression patterns similar to si:dkey-27f16.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-27f16.4 si:dkey-27f16.4 4 2 - - 1.000 - 1.000 - - - -
2. PEG3_24 PEG3_24 5 2 - - 1.000 - 1.000 - - - -
3. PHKA1 PHKA1 10 1 - - 1.000 - - - - - -
4. CU984579.1 ENSDARG00000116863 15 1 - - 1.000 - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
5. pdzrn3a ENSDARG00000073757 1 1 - - 1.000 - - - - - - PDZ domain containing RING finger 3a [Source:ZFIN;Acc:ZDB-GENE-090313-307]
6. itih6 ENSDARG00000056037 3 1 - - 1.000 - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
7. sh3bp1 ENSDARG00000078119 5 1 - - 1.000 - - - - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
8. zgc:194659 ENSDARG00000079347 17 1 - - 1.000 - - - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
9. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - - 1.000 - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
10. si:dkey-114b16.5 si:dkey-114b16.5 5 1 - - 1.000 - - - - - -
11. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 1 - - 1.000 - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
12. zgc:152658 ENSDARG00000018587, ENSDARG00000111314 2 1 - - 1.000 - - - - - - zgc:152658 [Source:ZFIN;Acc:ZDB-GENE-060929-68]
13. BX005294.1 ENSDARG00000101338 1 1 - - 1.000 - - - - - -
14. znf1112 ENSDARG00000095997 2 1 - - 1.000 - - - - - - zinc finger protein 1112 [Source:ZFIN;Acc:ZDB-GENE-110913-179]
15. LRFN4_1 LRFN4_1 5 1 - - 1.000 - - - - - -
16. CPEB4_1 CPEB4_1 1 1 - - 1.000 - - - - - -
17. si:dkey-13m3.2 ENSDARG00000103424 15 1 - - 1.000 - - - - - - si:dkey-13m3.2 [Source:ZFIN;Acc:ZDB-GENE-121214-42]
18. si:ch211-234p6.9 ENSDARG00000095730 3 1 - - - - 1.000 - - - - si:ch211-234p6.9 [Source:ZFIN;Acc:ZDB-GENE-060503-33]
19. CR388164.2 ENSDARG00000096885 1 1 - - 1.000 - - - - - -
20. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 1 - - - - 1.000 - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
21. CABZ01059421.1 CABZ01059421.1 1 1 - - 1.000 - - - - - -
22. si:ch211-267j24.2 si:ch211-267j24.2 7 1 - - 1.000 - - - - - -
23. CABZ01115881.1 ENSDARG00000086539 2 1 - - 1.000 - - - - - - SH2 domain containing 3A [Source:NCBI gene;Acc:100331568]
24. LBH ENSDARG00000111701 1 1 - - 1.000 - - - - - - limb bud and heart development [Source:ZFIN;Acc:ZDB-GENE-040426-1613]
25. cep170b ENSDARG00000074636 4 1 - - 1.000 - - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
26. b3gnt7 ENSDARG00000038489 29 1 - - - - 1.000 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-021210-4]
27. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1 - - - - 1.000 - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
28. si:dkeyp-41f9.3 ENSDARG00000075600 2 1 - - 1.000 - - - - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
29. CABZ01048675.1 CABZ01048675.1 4 1 - - 1.000 - - - - - -
30. ighd ENSDARG00000096248 1 1 - - 1.000 - - - - - - immunoglobulin heavy constant delta [Source:ZFIN;Acc:ZDB-GENE-040513-9]
31. MYO7B MYO7B 8 1 - - 1.000 - - - - - -
32. si:dkey-281i15.9 si:dkey-281i15.9 1 1 - - 1.000 - - - - - -
33. plac8.2 ENSDARG00000094438 3 1 - - - - 1.000 - - - - placenta-specific 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070424-12]
34. rargb ENSDARG00000054003 7 1 - - - - 1.000 - - - - retinoic acid receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-070314-1]
35. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - - 1.000 - - - - - -
36. si:dkey-11o1.2 ENSDARG00000095772 1 1 - - 1.000 - - - - - - si:dkey-11o1.2 [Source:ZFIN;Acc:ZDB-GENE-100921-76]
37. ptgfr ENSDARG00000074016 1 1 - - 1.000 - - - - - - prostaglandin F receptor (FP) [Source:ZFIN;Acc:ZDB-GENE-120919-6]
38. impact ENSDARG00000043288 7 1 - - - - 1.000 - - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
39. BX927369.2 BX927369.2 9 1 - - 1.000 - - - - - -
40. GABRA3 ENSDARG00000090883 5 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
41. CABZ01053592.1 ENSDARG00000117388 6 1 - - 1.000 - - - - - -
42. CABZ01102040.1 CABZ01102040.1 1 1 - - 1.000 - - - - - -
43. rgs9a ENSDARG00000037925 3 1 - - 1.000 - - - - - - regulator of G protein signaling 9a [Source:ZFIN;Acc:ZDB-GENE-060929-92]
44. si:dkey-196n19.5 si:dkey-196n19.5 6 1 - - - - 1.000 - - - -
45. CABZ01031738.1 CABZ01031738.1 1 1 - - 1.000 - - - - - -
46. pcsk5a ENSDARG00000067537 44 1 - - 1.000 - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
47. fars2 ENSDARG00000091247 1 1 - - 1.000 - - - - - - phenylalanyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-38]
48. si:dkey-199f5.4 ENSDARG00000110483 4 1 - - - - 1.000 - - - - si:dkey-199f5.4 [Source:ZFIN;Acc:ZDB-GENE-100922-53]
49. ttc25 ENSDARG00000058140 2 1 - - 1.000 - - - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
50. BX276122.1 BX276122.1 1 1 - - 1.000 - - - - - -
51. HTR7 17 1 - - 1.000 - - - - - - 5-hydroxytryptamine receptor 7
52. cacna1aa ENSDARG00000037905 4 1 - - 1.000 - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
53. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - 1.000 - - - - - -
54. si:dkey-13n15.11 ENSDARG00000078002 8 1 - - 1.000 - - - - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
55. KCNQ4 ENSDARG00000089490 1 1 - - 1.000 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-120215-132]
56. si:dkeyp-9d4.2 ENSDARG00000029720 9 1 - - - - 1.000 - - - - si:dkeyp-9d4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-156]
57. ENSDARG00000086653 ENSDARG00000086653 14 1 - - 1.000 - - - - - -
58. tagln ENSDARG00000045408 48 1 - - 1.000 - - - - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
59. si:ch211-106h4.4 ENSDARG00000093629 9 1 - - 1.000 - - - - - - si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]
60. znf804b ENSDARG00000103396 11 1 - - 1.000 - - - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
61. THBD ENSDARG00000092470 1 1 - - 1.000 - - - - - - thrombomodulin [Source:ZFIN;Acc:ZDB-GENE-110411-281]
62. si:ch211-255f4.11 ENSDARG00000102099, ENSDARG00000117185 2 1 - - 1.000 - - - - - - si:ch211-255f4.11 [Source:ZFIN;Acc:ZDB-GENE-050208-387]
63. serinc2l ENSDARG00000053425 5 1 - - 1.000 - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
64. BX571823.1 BX571823.1 2 1 - - 1.000 - - - - - -
65. TNPO1 ENSDARG00000035390 1 1 - - 1.000 - - - - - - transportin 1 [Source:ZFIN;Acc:ZDB-GENE-080819-1]
66. fibinb ENSDARG00000087196, ENSDARG00000110737 53 1 - - 1.000 - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
67. allc ENSDARG00000042562 12 1 - - 1.000 - - - - - - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
68. si:rp71-68n21.9 ENSDARG00000067751 7 1 - - 1.000 - - - - - - si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]
69. FAM120B ENSDARG00000030804 1 1 - - 1.000 - - - - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
70. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - 1.000 - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
71. si:dkey-287f10.2 si:dkey-287f10.2 3 1 - - 1.000 - - - - - -
72. CR759920.1 CR759920.1 4 1 - - 1.000 - - - - - -
73. si:ch211-196f5.2 ENSDARG00000041492 29 0.999 - - - - 0.999 - - - - si:ch211-196f5.2 [Source:ZFIN;Acc:ZDB-GENE-041014-306]
74. rab3gap2 ENSDARG00000044136 4 0.999 - - - - 0.999 - - - - RAB3 GTPase activating protein subunit 2 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-030616-610]
75. BX511006.2 BX511006.2 29 0.998 - - - - 0.998 - - - -
76. si:ch73-261i21.2 ENSDARG00000095975 9 0.998 - - - - 0.998 - - - - si:ch73-261i21.2 [Source:ZFIN;Acc:ZDB-GENE-110411-164]
77. crygm2d16 ENSDARG00000076790 129 0.998 - - - - 0.998 - - - - crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
78. LRTM1 ENSDARG00000098742 21 0.997 - - - - 0.997 - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
79. RPS11 ENSDARG00000053058 32 0.997 - - - - 0.997 - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
80. nfixb ENSDARG00000061836 7 0.996 - - - - 0.996 - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
81. zgc:86723 zgc:86723 299 0.995 - - - - 0.995 - - - -
82. foxn1 ENSDARG00000011879 22 0.994 - - - - 0.994 - - - - forkhead box N1 [Source:ZFIN;Acc:ZDB-GENE-021008-1]
83. crygm2d5 ENSDARG00000069792 207 0.99 - - - - 0.990 - - - - crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
84. BX321870.1 ENSDARG00000098519 9 0.989 - - - - 0.989 - - - -
85. si:dkey-253d23.8 ENSDARG00000094427 26 0.989 - - - - 0.989 - - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
86. itln1 ENSDARG00000007534 8 0.988 - - 0.988 - - - - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
87. RNF39 RNF39 52 0.987 - - - - 0.987 - - - -
88. U6_18 U6_18 12 0.984 - - - - 0.984 - - - -
89. nrros ENSDARG00000071491, ENSDARG00000112102 64 0.984 - - - - 0.984 - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
90. rag1 ENSDARG00000052122 13 0.983 - - - - 0.983 - - - - recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
91. C3H17orf104 C3H17orf104 16 0.982 - - - - 0.982 - - - -
92. cx30.9 ENSDARG00000070362 17 0.981 - - - - 0.981 - - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
93. lyve1b ENSDARG00000062483 14 0.974 - - - - 0.974 - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
94. si:ch211-210h11.7 si:ch211-210h11.7 32 0.968 - - - - 0.968 - - - -
95. GABRA2 ENSDARG00000113737 5 0.966 - - - - 0.966 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
96. si:dkeyp-72h1.1 ENSDARG00000095347 7 0.965 - - - - 0.965 - - - - si:dkeyp-72h1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-447]
97. adcy2a ENSDARG00000058392 13 0.962 - - - - 0.962 - - - - adenylate cyclase 2a [Source:ZFIN;Acc:ZDB-GENE-061109-1]
98. ciz1a ENSDARG00000089781 20 0.959 - - - - 0.959 - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
99. im:6903943 im:6903943 26 0.953 - - 0.953 - - - - - -
100. myo5b_1 ENSDARG00000062003 6 0.953 - - 0.953 - - - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]

There are 189 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA