Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-272j9.2

Gene Name Gene ID Reads Annotation
si:dkey-272j9.2 si:dkey-272j9.2 91










Genes with expression patterns similar to si:dkey-272j9.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-272j9.2 si:dkey-272j9.2 91 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:dkey-122c11.4 si:dkey-122c11.4 13 2 - 1.000 - - - 1.000 - - -
3. syt9b ENSDARG00000029239 31 2 - 1.000 - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
4. CT573433.2 CT573433.2 115 1.923 - 1.000 - - - 0.923 - - -
5. SCAMP5 SCAMP5 19 1.916 - 1.000 - - - 0.916 - - -
6. si:dkey-119g10.4 si:dkey-119g10.4 7 1.888 - 1.000 - - - - 0.888 - -
7. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.875 - 1.000 - - - 0.875 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
8. tagln3a ENSDARG00000079805 123 1.856 - 1.000 - - - 0.856 - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
9. hspbap1 ENSDARG00000033771 41 1.8 - 1.000 0.800 - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
10. ptf1a ENSDARG00000014479 349 1.792 - 1.000 - - - 0.792 - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
11. capn1b ENSDARG00000052748, ENSDARG00000117045 320 1.775 - 0.837 - - - 0.938 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
12. PHYH ENSDARG00000086740 15 1.762 - 1.000 - - - 0.762 - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
13. uckl1a ENSDARG00000001686 21 1.742 - 1.000 - - - 0.742 - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
14. CU179656.1 ENSDARG00000107086 270 1.741 - 0.969 - - - 0.772 - - -
15. TMEM98 ENSDARG00000059743 214 1.74 - 1.000 - - - - 0.740 - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
16. khdrbs2 ENSDARG00000069469 160 1.735 - 1.000 - - - 0.735 - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
17. prdm14 ENSDARG00000045371 106 1.712 - 1.000 - - - 0.712 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
18. bdnf ENSDARG00000018817 193 1.707 - 1.000 - - - 0.707 - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
19. pou4f1 ENSDARG00000005559 821 1.689 - - - 0.872 - 0.817 - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
20. scn2b ENSDARG00000101713 796 1.681 - 0.909 - - - 0.772 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
21. lhx1a ENSDARG00000014018 958 1.681 - 0.903 - 0.778 - - - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
22. rassf9 ENSDARG00000074721 448 1.665 - - - 0.909 - - 0.756 - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
23. si:dkey-114b16.4 si:dkey-114b16.4 35 1.637 - - - - - - 0.904 0.733 -
24. CABZ01048373.1 CABZ01048373.1 81 1.625 - 0.751 - - - 0.874 - - -
25. galk2 ENSDARG00000004059 122 1.609 - - - - - 0.903 0.706 - - galactokinase 2 [Source:ZFIN;Acc:ZDB-GENE-041114-143]
26. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.6 - - - 0.782 - 0.818 - - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
27. rab11fip3 ENSDARG00000016490 661 1.583 - - - 0.812 - - 0.771 - - RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
28. DNAI1 DNAI1 11 1.569 - 0.822 - - - - - 0.747 -
29. fam57ba ENSDARG00000026875 504 1.563 - - - 0.756 - 0.807 - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
30. snap25b ENSDARG00000058117 469 1.515 - - - 0.782 - 0.733 - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
31. si:dkey-192g7.3 ENSDARG00000094012 105 1.494 - 0.733 - - - - 0.761 - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
32. lrrc6 ENSDARG00000053318 146 1.48 - - 0.728 - - - - 0.752 - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
33. slc13a5 slc13a5 15 1.479 - 0.704 - - - - 0.775 - -
34. ccdc169 ENSDARG00000089570 101 1.433 - - 0.714 - - - 0.719 - - coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
35. pygo1 ENSDARG00000098687 4 1 - - - - - 1.000 - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
36. si:dkey-49o11.1 0 1 - 1.000 - - - - - - - si:dkey-49o11.1
37. mthfd2l ENSDARG00000054199 25 1 - 1.000 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-5707]
38. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - - - 1.000 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
39. GAS2 18 1 - - - - - 1.000 - - - growth arrest specific 2, transcript variant X1
40. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - 1.000 - - - - - - -
41. GRIK3 ENSDARG00000077715 178 1 - 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
42. DKK3 DKK3 12 1 - 1.000 - - - - - - -
43. si:ch211-245l1.1 si:ch211-245l1.1 1 1 - - - - - 1.000 - - -
44. ENSDARG00000088231 ENSDARG00000088231 0 1 - 1.000 - - - - - - -
45. rhbdd3 ENSDARG00000079816 2 1 - - - - - 1.000 - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
46. si:ch211-141e20.2 ENSDARG00000093349 61 1 - 1.000 - - - - - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
47. CABZ01066439.2 CABZ01066439.2 5 1 - 1.000 - - - - - - -
48. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
49. zgc:113307 ENSDARG00000044894 17 1 - 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
50. lmx1a ENSDARG00000020354 111 1 - 1.000 - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
51. shank3a ENSDARG00000063332 5 1 - - - - - 1.000 - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
52. ABCA7 ABCA7 12 1 - 1.000 - - - - - - -
53. si:ch211-214c7.4 ENSDARG00000069595 56 1 - - - - - 1.000 - - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
54. slc17a6b ENSDARG00000041150 823 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
55. IKZF4 ENSDARG00000037068 36 1 - - - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
56. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1 - 1.000 - - - - - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
57. fam163b ENSDARG00000073914 46 1 - 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
58. si:ch211-168h21.3 10 1 - - - - - 1.000 - - - si:ch211-168h21.3
59. ZNF337_16 ZNF337_16 22 1 - - - - - 1.000 - - -
60. lingo1a ENSDARG00000034165 179 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
61. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
62. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 1 - - - - - 1.000 - - - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
63. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1 - 1.000 - - - - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
64. wnt10b ENSDARG00000040925 162 1 - - - - - 1.000 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
65. hsd17b7_1 ENSDARG00000088140 36 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
66. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - 1.000 - - - - - - -
67. CR381630.1 CR381630.1 23 1 - - - - - 1.000 - - -
68. skor1a ENSDARG00000069030 19 1 - - - - - 1.000 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
69. mir184 48 1 - 1.000 - - - - - - - microRNA 184
70. nfixa ENSDARG00000043226 14 1 - 1.000 - - - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
71. gfra3 ENSDARG00000087704 122 1 - 1.000 - - - - - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
72. si:dkey-43b14.8 35 1 - 1.000 - - - - - - - si:dkey-43b14.8
73. slc26a6l ENSDARG00000054127 8 1 - 1.000 - - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
74. BX005052.1 BX005052.1 16 1 - - - - - 1.000 - - -
75. TMEM74 26 1 - 1.000 - - - - - - - transmembrane protein 74, transcript variant X3
76. chrm2a ENSDARG00000098612 5 1 - - - - - 1.000 - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
77. ACSL6 12 1 - - - - - 1.000 - - - acyl-CoA synthetase long-chain family member 6
78. nebl ENSDARG00000021200 40 1 - 1.000 - - - - - - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
79. ppp4r4 ENSDARG00000010407 1 1 - - - - - 1.000 - - - protein phosphatase 4, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041001-164]
80. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - 1.000 - - - - - - -
81. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
82. tmigd1 ENSDARG00000007040 19 1 - 1.000 - - - - - - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
83. cecr1b 2 1 - - - - - 1.000 - - - cat eye syndrome chromosome region, candidate 1b
84. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
85. cyp2n13 ENSDARG00000042953 10 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
86. arl11l arl11l 31 1 - 1.000 - - - - - - -
87. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - 1.000 - - - - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
88. PRKCA_1 ENSDARG00000099841 12 1 - - - - - 1.000 - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
89. sirt7 ENSDARG00000060645 1 1 - 1.000 - - - - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
90. gltpb ENSDARG00000077962 5 1 - 1.000 - - - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
91. si:ch211-195h23.4 ENSDARG00000093337 1 1 - 1.000 - - - - - - - si:ch211-195h23.4 [Source:ZFIN;Acc:ZDB-GENE-070912-175]
92. mfsd4a mfsd4a 179 1 - 1.000 - - - - - - -
93. taar16f ENSDARG00000116273 0 1 - 1.000 - - - - - - - trace amine associated receptor 16f [Source:ZFIN;Acc:ZDB-GENE-060413-20]
94. porcnl ENSDARG00000052455 29 1 - - - - - 1.000 - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
95. hoxc9a ENSDARG00000092809 18 1 - 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
96. cnga3b ENSDARG00000012297 2 1 - 1.000 - - - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
97. zgc:77112 ENSDARG00000015657 24 1 - - - - - 1.000 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
98. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1 - 1.000 - - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
99. si:ch211-214p16.1 ENSDARG00000044129 64 1 - 1.000 - - - - - - - si:ch211-214p16.1 [Source:NCBI gene;Acc:368901]
100. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]

There are 1277 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA