Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-272j9.2

Gene Name Gene ID Reads Annotation
si:dkey-272j9.2 si:dkey-272j9.2 91










Genes with expression patterns similar to si:dkey-272j9.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-272j9.2 si:dkey-272j9.2 91 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:dkey-122c11.4 si:dkey-122c11.4 13 2 - 1.000 - - - 1.000 - - -
3. syt9b ENSDARG00000029239 31 2 - 1.000 - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
4. CT573433.2 CT573433.2 115 1.923 - 1.000 - - - 0.923 - - -
5. SCAMP5 SCAMP5 19 1.916 - 1.000 - - - 0.916 - - -
6. si:dkey-119g10.4 si:dkey-119g10.4 7 1.888 - 1.000 - - - - 0.888 - -
7. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.875 - 1.000 - - - 0.875 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
8. tagln3a ENSDARG00000079805 123 1.856 - 1.000 - - - 0.856 - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
9. hspbap1 ENSDARG00000033771 41 1.8 - 1.000 0.800 - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
10. ptf1a ENSDARG00000014479 349 1.792 - 1.000 - - - 0.792 - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
11. capn1b ENSDARG00000052748, ENSDARG00000117045 320 1.775 - 0.837 - - - 0.938 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
12. PHYH ENSDARG00000086740 15 1.762 - 1.000 - - - 0.762 - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
13. uckl1a ENSDARG00000001686 21 1.742 - 1.000 - - - 0.742 - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
14. CU179656.1 ENSDARG00000107086 270 1.741 - 0.969 - - - 0.772 - - -
15. TMEM98 ENSDARG00000059743 214 1.74 - 1.000 - - - - 0.740 - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
16. khdrbs2 ENSDARG00000069469 160 1.735 - 1.000 - - - 0.735 - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
17. prdm14 ENSDARG00000045371 106 1.712 - 1.000 - - - 0.712 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
18. bdnf ENSDARG00000018817 193 1.707 - 1.000 - - - 0.707 - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
19. pou4f1 ENSDARG00000005559 821 1.689 - - - 0.872 - 0.817 - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
20. lhx1a ENSDARG00000014018 958 1.681 - 0.903 - 0.778 - - - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
21. scn2b ENSDARG00000101713 796 1.681 - 0.909 - - - 0.772 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
22. rassf9 ENSDARG00000074721 448 1.665 - - - 0.909 - - 0.756 - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
23. si:dkey-114b16.4 si:dkey-114b16.4 35 1.637 - - - - - - 0.904 0.733 -
24. CABZ01048373.1 CABZ01048373.1 81 1.625 - 0.751 - - - 0.874 - - -
25. galk2 ENSDARG00000004059 122 1.609 - - - - - 0.903 0.706 - - galactokinase 2 [Source:ZFIN;Acc:ZDB-GENE-041114-143]
26. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.6 - - - 0.782 - 0.818 - - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
27. rab11fip3 ENSDARG00000016490 661 1.583 - - - 0.812 - - 0.771 - - RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
28. DNAI1 DNAI1 11 1.569 - 0.822 - - - - - 0.747 -
29. fam57ba ENSDARG00000026875 504 1.563 - - - 0.756 - 0.807 - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
30. snap25b ENSDARG00000058117 469 1.515 - - - 0.782 - 0.733 - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
31. si:dkey-192g7.3 ENSDARG00000094012 105 1.494 - 0.733 - - - - 0.761 - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
32. lrrc6 ENSDARG00000053318 146 1.48 - - 0.728 - - - - 0.752 - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
33. slc13a5 slc13a5 15 1.479 - 0.704 - - - - 0.775 - -
34. ccdc169 ENSDARG00000089570 101 1.433 - - 0.714 - - - 0.719 - - coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
35. calb1 ENSDARG00000031598 252 1 - 1.000 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
36. tnk2b ENSDARG00000104409 1 1 - - - - - 1.000 - - - tyrosine kinase, non-receptor, 2b [Source:ZFIN;Acc:ZDB-GENE-110411-165]
37. mfsd4a mfsd4a 179 1 - 1.000 - - - - - - -
38. gltpb ENSDARG00000077962 5 1 - 1.000 - - - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
39. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - 1.000 - - - - - - -
40. atxn1b ENSDARG00000060862 345 1 - 1.000 - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
41. CR318629.1 CR318629.1 7 1 - - - - - 1.000 - - -
42. def6b ENSDARG00000044524 99 1 - 1.000 - - - - - - - differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
43. trpm2_1 ENSDARG00000095696, ENSDARG00000101641 1 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
44. CU179703.1 CU179703.1 5 1 - 1.000 - - - - - - -
45. morc3b ENSDARG00000043271 8 1 - 1.000 - - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
46. BX511266.1 BX511266.1 21 1 - - - - - 1.000 - - -
47. rims3 ENSDARG00000062305 202 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
48. cyp2j20 ENSDARG00000094057 44 1 - 1.000 - - - - - - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
49. cacna1ab ENSDARG00000006923 12 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
50. CABZ01066439.2 CABZ01066439.2 5 1 - 1.000 - - - - - - -
51. DNAH10 ENSDARG00000061486 29 1 - 1.000 - - - - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
52. si:dkey-40n15.2 si:dkey-40n15.2 1 1 - 1.000 - - - - - - -
53. si:dkey-49o11.1 0 1 - 1.000 - - - - - - - si:dkey-49o11.1
54. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - 1.000 - - - - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
55. si:ch211-138k19.2 si:ch211-138k19.2 398 1 - 1.000 - - - - - - -
56. ABCA7 ABCA7 12 1 - 1.000 - - - - - - -
57. si:ch211-122l14.7 ENSDARG00000095576 5 1 - 1.000 - - - - - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
58. hivep3a ENSDARG00000075928 17 1 - - - - - 1.000 - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
59. C10H5orf63 C10H5orf63 17 1 - 1.000 - - - - - - -
60. chrm2a ENSDARG00000098612 5 1 - - - - - 1.000 - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
61. si:ch211-207c7.6 si:ch211-207c7.6 23 1 - - - - - 1.000 - - -
62. nebl ENSDARG00000021200 40 1 - 1.000 - - - - - - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
63. CMAS CMAS 10 1 - 1.000 - - - - - - -
64. CABZ01088933.1 CABZ01088933.1 40 1 - 1.000 - - - - - - -
65. hsd17b7_1 ENSDARG00000088140 36 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
66. mapk9 ENSDARG00000077364 38 1 - - - - - 1.000 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
67. grin2ca ENSDARG00000078149 13 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca [Source:ZFIN;Acc:ZDB-GENE-070822-3]
68. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 1 - 1.000 - - - - - - - retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
69. cacng3b ENSDARG00000076401 91 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
70. si:ch211-176g6.1 ENSDARG00000096522 8 1 - 1.000 - - - - - - - si:ch211-176g6.1 [Source:ZFIN;Acc:ZDB-GENE-121214-106]
71. si:ch211-208f21.4 si:ch211-208f21.4 4 1 - - - - - 1.000 - - -
72. CR388129.1 ENSDARG00000097173 89 1 - - - - - 1.000 - - -
73. zbtb20 ENSDARG00000005586 195 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
74. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - - - - 1.000 - - -
75. tmem44 ENSDARG00000068193 8 1 - 1.000 - - - - - - - transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
76. col28a1 col28a1 5 1 - 1.000 - - - - - - -
77. FP074874.2 ENSDARG00000105724 107 1 - 1.000 - - - - - - -
78. kif17 ENSDARG00000055238 12 1 - 1.000 - - - - - - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
79. wu:fj49c06 wu:fj49c06 0 1 - 1.000 - - - - - - -
80. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - - - - - 1.000 - - -
81. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
82. CT025910.1 CT025910.1 143 1 - 1.000 - - - - - - -
83. si:dkey-200l5.4 ENSDARG00000095294 13 1 - 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
84. FBLN7 ENSDARG00000089519 4 1 - - - - - 1.000 - - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
85. sdhaf1 ENSDARG00000092478 51 1 - 1.000 - - - - - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
86. zgc:110434 21 1 - 1.000 - - - - - - - zgc:110434
87. RNF214_1 RNF214_1 5 1 - 1.000 - - - - - - -
88. nr1d4a ENSDARG00000031161 24 1 - - - - - 1.000 - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
89. sox17 ENSDARG00000101717 11 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
90. cyp46a4 cyp46a4 5 1 - 1.000 - - - - - - -
91. USP43 USP43 14 1 - 1.000 - - - - - - -
92. trpa1b ENSDARG00000031875 39 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
93. NTRK3 NTRK3 163 1 - 1.000 - - - - - - -
94. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
95. KCNA2_1 KCNA2_1 15 1 - - - - - 1.000 - - -
96. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1 - 1.000 - - - - - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
97. nmu ENSDARG00000043299 67 1 - - - - - 1.000 - - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
98. fam219ab ENSDARG00000013813 591 1 - 1.000 - - - - - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
99. KCNG2 ENSDARG00000035961 58 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
100. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - 1.000 - - - - - - -

There are 1277 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA