Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-265e15.5

Gene Name Gene ID Reads Annotation
si:dkey-265e15.5 ENSDARG00000103229 6 si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]










Genes with expression patterns similar to si:dkey-265e15.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-265e15.5 ENSDARG00000103229 6 5 1.000 - 1.000 1.000 1.000 - - 1.000 - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
2. si:dkey-9a20.8 si:dkey-9a20.8 8 2 - - - 1.000 1.000 - - - -
3. zgc:153116 ENSDARG00000077205 7 2 - - - 1.000 1.000 - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
4. adck4 7 2 1.000 - - 1.000 - - - - - aarF domain containing kinase 4, transcript variant X2
5. si:ch211-262n1.5 12 2 - - - 1.000 1.000 - - - - si:ch211-262n1.5
6. nfixa ENSDARG00000043226 14 2 - - - 1.000 1.000 - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
7. GRIK2 ENSDARG00000113771 3 1.965 - - - 1.000 0.965 - - - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
8. SLCO5A1 SLCO5A1 6 1.963 - - 0.963 - 1.000 - - - -
9. gper gper 4 1.951 - - - 1.000 0.951 - - - -
10. slc25a37 ENSDARG00000073743 31 1.876 - - 0.876 - 1.000 - - - - solute carrier family 25 (mitochondrial iron transporter), member 37 [Source:ZFIN;Acc:ZDB-GENE-031118-202]
11. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1.764 0.764 - - 1.000 - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
12. ZNF835 ZNF835 6 1.764 0.764 - - - 1.000 - - - -
13. ydjc ENSDARG00000062655 5 1.764 0.764 - - 1.000 - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
14. si:dkey-40j3.3 ENSDARG00000103597 5 1.764 0.764 - - 1.000 - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
15. si:dkey-43k4.4 si:dkey-43k4.4 4 1.764 0.764 - - - 1.000 - - - -
16. nfixb ENSDARG00000061836 7 1.764 0.764 - - 1.000 - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
17. gpr19 ENSDARG00000102226 17 1.764 0.764 - - 1.000 - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
18. tbc1d9 ENSDARG00000043627, ENSDARG00000059900 3 1.764 0.764 - - - 1.000 - - - - TBC1 domain family, member 9 (with GRAM domain) [Source:ZFIN;Acc:ZDB-GENE-060810-33]
19. IMPG2 IMPG2 1 1.764 0.764 - - 1.000 - - - - -
20. si:ch211-218d20.10 si:ch211-218d20.10 4 1.728 0.764 - 0.964 - - - - - -
21. snai3 ENSDARG00000031243 31 1.725 0.952 - 0.773 - - - - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
22. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1.629 0.764 - 0.865 - - - - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
23. ntrk1 ENSDARG00000004586 19 1.584 0.764 - 0.820 - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
24. UNC13A UNC13A 36 1.574 0.764 - - - 0.810 - - - -
25. OXLD1 8 1.556 0.764 - - - - - - 0.792 - oxidoreductase-like domain containing 1, transcript variant X1
26. WWC1 ENSDARG00000076041 26 1.507 0.764 - - 0.743 - - - - - WW and C2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091118-8]
27. RIMS1 RIMS1 9 1.507 0.764 - - 0.743 - - - - -
28. si:dkey-43b14.8 35 1.474 - - 0.707 - 0.767 - - - - si:dkey-43b14.8
29. si:dkeyp-10a3.2 18 1.457 - - 0.714 0.743 - - - - - si:dkeyp-10a3.2
30. slc6a6b ENSDARG00000098438 7 1 - - - - 1.000 - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
31. scarb2 scarb2 0 1 - - - 1.000 - - - - -
32. CU570791.1 ENSDARG00000098597 4 1 - - - 1.000 - - - - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
33. si:dkey-19a16.13 ENSDARG00000095454 0 1 - - - - 1.000 - - - - si:dkey-19a16.13 [Source:ZFIN;Acc:ZDB-GENE-110411-2]
34. PBRM1 ENSDARG00000003877 225 1 1.000 - - - - - - - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
35. plek ENSDARG00000104325 21 1 - - - - 1.000 - - - - pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506]
36. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - - 1.000 - - - - -
37. si:dkey-149m13.5 ENSDARG00000094653 1 1 - - - 1.000 - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
38. si:ch211-145h19.1 31 1 1.000 - - - - - - - - si:ch211-145h19.1
39. CR749741.3 CR749741.3 0 1 - - - - 1.000 - - - -
40. CR548631.2 CR548631.2 0 1 - - - - 1.000 - - - -
41. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - 1.000 - - - - -
42. loxhd1b ENSDARG00000074638 6 1 - - - 1.000 - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
43. CU183952.2 CU183952.2 6 1 - - - 1.000 - - - - -
44. zgc:153311 ENSDARG00000015964 85 1 - - - - 1.000 - - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
45. si:ch211-207e19.13 si:ch211-207e19.13 1 1 - - - - 1.000 - - - -
46. TMEM246 ENSDARG00000061553 168 1 1.000 - - - - - - - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
47. tbx4 ENSDARG00000030058, ENSDARG00000113067 5 1 - - - 1.000 - - - - - T-box 4 [Source:ZFIN;Acc:ZDB-GENE-991124-5]
48. STPG2 ENSDARG00000061060 16 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
49. BX640518.1 BX640518.1 24 1 1.000 - - - - - - - -
50. ttc6 ENSDARG00000104125 7 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
51. si:ch211-223a10.3 si:ch211-223a10.3 3 1 - - - - 1.000 - - - -
52. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - 1.000 - - - - -
53. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - 1.000 - - - - - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
54. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - - - 1.000 - - - - -
55. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1 1.000 - - - - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
56. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - 1.000 - - - -
57. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - 1.000 - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
58. usp53b ENSDARG00000076499 16 1 - - - 1.000 - - - - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
59. BX548021.2 BX548021.2 4 1 - - - - 1.000 - - - -
60. CR356223.3 CR356223.3 0 1 - - - - 1.000 - - - -
61. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - 1.000 - - - -
62. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - 1.000 - - - - -
63. crygm2e ENSDARG00000044875 1 1 - - - - 1.000 - - - - crystallin, gamma M2e [Source:ZFIN;Acc:ZDB-GENE-081105-116]
64. pip4k2ab ENSDARG00000063544 1 1 - - - - 1.000 - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
65. TMEM196 ENSDARG00000114159 80 1 1.000 - - - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
66. CR854855.2 CR854855.2 1 1 - - - - 1.000 - - - -
67. C14H5orf45 C14H5orf45 83 1 1.000 - - - - - - - -
68. th2 ENSDARG00000038384 1 1 - - - 1.000 - - - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
69. ntrk3a ENSDARG00000077228 12 1 - - - 1.000 - - - - - neurotrophic tyrosine kinase, receptor, type 3a [Source:ZFIN;Acc:ZDB-GENE-010126-3]
70. mgrn1b ENSDARG00000004796 18 1 1.000 - - - - - - - - mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]
71. si:dkey-197d18.1 si:dkey-197d18.1 4 1 - - - - 1.000 - - - -
72. ccbe1 ENSDARG00000086158 0 1 - - - 1.000 - - - - - collagen and calcium binding EGF domains 1 [Source:ZFIN;Acc:ZDB-GENE-090506-7]
73. EP400 ENSDARG00000100965 45 1 - - - 1.000 - - - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
74. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - 1.000 - - - - -
75. CABZ01067232.1 ENSDARG00000057408 1 1 - - - - 1.000 - - - - otolin-1-like [Source:NCBI gene;Acc:101886389]
76. glis1b ENSDARG00000027933 14 1 - - - 1.000 - - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
77. ZNF337_17 ZNF337_17 12 1 - - - - 1.000 - - - -
78. pif1 ENSDARG00000020289 216 1 1.000 - - - - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
79. itpr2 ENSDARG00000011909 3 1 - - - - 1.000 - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
80. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - - 1.000 - - - -
81. ANGPT2 ANGPT2 2 1 - - - - 1.000 - - - -
82. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - 1.000 - - - - -
83. ASPG_1 ASPG_1 2 1 - - - - 1.000 - - - -
84. PEG3_31 PEG3_31 6 1 - - - 1.000 - - - - -
85. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - 1.000 - - - - -
86. mhc1zaa ENSDARG00000092162 2 1 - - - 1.000 - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
87. twsg1b 7 1 - - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
88. tsg101 tsg101 1 1 - - - - 1.000 - - - -
89. CABZ01073069.1 CABZ01073069.1 5 1 - - - 1.000 - - - - -
90. plscr3a ENSDARG00000093078 7 1 - - - - 1.000 - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
91. si:dkey-228c11.4 si:dkey-228c11.4 5 1 - - - 1.000 - - - - -
92. CU681842.3 CU681842.3 2 1 - - - - 1.000 - - - -
93. UTS2R_1 UTS2R_1 1 1 - - - - 1.000 - - - -
94. si:ch73-299h12.1_1 ENSDARG00000102321 8 1 - - - 1.000 - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
95. csrp1b ENSDARG00000030980 2 1 - - - 1.000 - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
96. CU457819.2 ENSDARG00000105374 8 1 - - - - 1.000 - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
97. DEPDC4 DEPDC4 1 1 - - - - 1.000 - - - -
98. MAMDC4 MAMDC4 3 1 - - - 1.000 - - - - -
99. CR626884.3 ENSDARG00000104648 1 1 - - - - 1.000 - - - -
100. xrra1 ENSDARG00000089578 18 1 - - - 1.000 - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]

There are 605 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA