Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-261h17.1

Gene Name Gene ID Reads Annotation
si:dkey-261h17.1 ENSDARG00000095268 11403 si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]










Genes with expression patterns similar to si:dkey-261h17.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-261h17.1 ENSDARG00000095268 11403 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
2. vsg1 1870 2.42 0.842 - - - - 0.800 0.778 - - vessel-specific 1
3. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 2.297 - - 0.734 - - 0.819 0.744 - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
4. fli1a ENSDARG00000054632 330 2.262 0.785 - - - - 0.722 0.755 - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
5. gpr182 ENSDARG00000036616 455 2.257 0.780 - - - - 0.727 0.750 - - G protein-coupled receptor 182 [Source:ZFIN;Acc:ZDB-GENE-030131-2361]
6. mrc1a ENSDARG00000102100 1260 2.242 0.746 - - - - 0.786 0.710 - - mannose receptor, C type 1a [Source:ZFIN;Acc:ZDB-GENE-090915-4]
7. clec14a ENSDARG00000103533 718 2.229 0.823 - - - - 0.706 0.700 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
8. exoc3l2a ENSDARG00000008414 227 2.22 0.740 - - - - 0.728 0.752 - - exocyst complex component 3-like 2a [Source:ZFIN;Acc:ZDB-GENE-060526-343]
9. cdh5 ENSDARG00000075549 2288 1.69 0.832 - - - - - 0.858 - - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
10. nop16 ENSDARG00000044402 3645 1.647 - 0.904 - - - - 0.743 - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
11. gars ENSDARG00000059070 17015 1.638 - 0.925 - - - - 0.713 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
12. slc1a4 ENSDARG00000000551 4298 1.629 - 0.900 - - - - 0.729 - - solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-030616-566]
13. COMP 2018 1.618 0.720 0.898 - - - - - - - cartilage oligomeric matrix protein, transcript variant X1
14. PDPR ENSDARG00000103288 711 1.616 - 0.841 - - - - 0.775 - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
15. CR376783.1 ENSDARG00000074235 259 1.612 0.730 - - - - - 0.882 - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
16. cox5ab ENSDARG00000099663 5689 1.607 - 0.896 - - - - 0.711 - - cytochrome c oxidase subunit 5Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5162]
17. march5l ENSDARG00000028559 943 1.598 - 0.856 - - - 0.742 - - - membrane-associated ring finger (C3HC4) 5, like [Source:ZFIN;Acc:ZDB-GENE-030131-4792]
18. wls ENSDARG00000009534 8719 1.592 - 0.881 - - - - 0.711 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
19. nr2f6a ENSDARG00000003607 4779 1.591 - 0.865 0.726 - - - - - - nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
20. ptpn13 ENSDARG00000103699 2866 1.589 - 0.871 - - - - - - 0.718 protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
21. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.586 - - - - - 0.738 0.848 - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
22. tnfaip8l3 ENSDARG00000088709 345 1.585 - - - - - 0.782 0.803 - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
23. colec12 ENSDARG00000061140 1323 1.579 0.765 - - - - - 0.814 - - collectin sub-family member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9807]
24. lmo2 ENSDARG00000095019 1098 1.575 0.777 - - - - - 0.798 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
25. col4a1 ENSDARG00000055009 3083 1.569 0.804 - - - - - 0.765 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
26. wu:fb12e11 wu:fb12e11 2332 1.568 - 0.843 - - - 0.725 - - -
27. tiprl ENSDARG00000032353 1045 1.562 - 0.837 - - - - 0.725 - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
28. ube2h ENSDARG00000000019 9900 1.559 - 0.803 - - - - - - 0.756 ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
29. STARD7 ENSDARG00000074858 889 1.555 - 0.834 - - - 0.721 - - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
30. she ENSDARG00000087956 941 1.552 - - - - - 0.772 0.780 - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
31. CABZ01018247.1 CABZ01018247.1 609 1.544 0.740 - - - - - 0.804 - -
32. exoc1 ENSDARG00000043019 819 1.541 - 0.836 - - - - 0.705 - - exocyst complex component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1057]
33. tgfb1b ENSDARG00000034895 608 1.534 0.772 - - - - - 0.762 - - transforming growth factor, beta 1b [Source:ZFIN;Acc:ZDB-GENE-091028-1]
34. fermt2 ENSDARG00000020242 9351 1.529 - - 0.825 - - - - - 0.704 fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
35. optc ENSDARG00000014358 1295 1.511 - - 0.741 0.770 - - - - - opticin [Source:ZFIN;Acc:ZDB-GENE-030131-1798]
36. si:dkey-238c7.12 si:dkey-238c7.12 6600 1.51 - - - - - 0.806 0.704 - -
37. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 1.509 - - - - - 0.768 0.741 - - HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
38. C8H9orf116 C8H9orf116 379 1.486 - - - - - 0.724 0.762 - -
39. THOP1 ENSDARG00000013776 2717 1.463 - - 0.745 - - - 0.718 - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
40. sox18 ENSDARG00000058598 678 1.458 0.744 - - - - - 0.714 - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
41. sele ENSDARG00000009123 122 1.452 - - - - - 0.747 0.705 - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
42. pdzk1 ENSDARG00000022261 398 1.443 - - - - - 0.728 0.715 - - PDZ domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-031222-1]
43. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.437 - - 0.713 - - - 0.724 - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
44. CT583658.1 CT583658.1 561 1.432 0.724 - - - - - 0.708 - -
45. mfap2 ENSDARG00000059367 3774 1.426 - - - - - 0.723 0.703 - - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
46. tie1 ENSDARG00000004105 400 1.421 0.713 - - - - - 0.708 - - tyrosine kinase with immunoglobulin-like and EGF-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-990415-55]
47. AEBP1 ENSDARG00000091726 1431 1.413 - - - - - 0.708 0.705 - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
48. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 0.94 - 0.940 - - - - - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
49. fubp1 ENSDARG00000029248 15259 0.937 - 0.937 - - - - - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
50. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 0.928 - 0.928 - - - - - - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
51. abcf1 ENSDARG00000031795 8635 0.927 - 0.927 - - - - - - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
52. cdkn1c cdkn1c 17427 0.926 - 0.926 - - - - - - -
53. cdv3 ENSDARG00000023028 12380 0.924 - 0.924 - - - - - - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
54. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 0.922 - 0.922 - - - - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
55. sdhdb ENSDARG00000030139 9761 0.921 - 0.921 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
56. bin1 bin1 3199 0.921 - 0.921 - - - - - - -
57. gng5 ENSDARG00000039830 12102 0.921 - 0.921 - - - - - - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
58. cct3 ENSDARG00000016173 15869 0.919 - 0.919 - - - - - - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
59. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 0.919 - 0.919 - - - - - - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
60. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 0.917 - 0.917 - - - - - - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
61. sgcd ENSDARG00000098573 4980 0.916 - 0.916 - - - - - - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
62. eef1db ENSDARG00000030053 5185 0.914 - 0.914 - - - - - - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
63. ndufv3 ENSDARG00000090389 4829 0.914 - 0.914 - - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
64. rpl7l1 ENSDARG00000042864 3256 0.912 - 0.912 - - - - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
65. znf385a ENSDARG00000009899 3433 0.91 - 0.910 - - - - - - - zinc finger protein 385A [Source:ZFIN;Acc:ZDB-GENE-090313-255]
66. cdca7a ENSDARG00000077620 9345 0.91 - 0.910 - - - - - - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
67. snoU83B snoU83B 4666 0.908 - 0.908 - - - - - - -
68. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 0.906 - 0.906 - - - - - - - ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
69. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 0.905 - 0.905 - - - - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
70. flncb ENSDARG00000018820 5595 0.905 - 0.905 - - - - - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
71. purbb ENSDARG00000103546 4983 0.904 - 0.904 - - - - - - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
72. cxcl12a ENSDARG00000037116 5433 0.901 - 0.901 - - - - - - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
73. hoxa10b ENSDARG00000031337 3992 0.898 - 0.898 - - - - - - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
74. rhoad rhoad 8007 0.897 - 0.897 - - - - - - -
75. bag6 ENSDARG00000075892 3782 0.897 - 0.897 - - - - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
76. cdc42se1 ENSDARG00000023724 3901 0.893 - 0.893 - - - - - - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
77. cul4b ENSDARG00000060510 6053 0.892 - 0.892 - - - - - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
78. agrn ENSDARG00000079388, ENSDARG00000110127 5806 0.892 - 0.892 - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
79. eaf2 ENSDARG00000010432 3768 0.891 - 0.891 - - - - - - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
80. trim63 trim63 2437 0.89 - 0.890 - - - - - - -
81. zgc:100832 ENSDARG00000012035 462 0.889 - - - - - - 0.889 - - zgc:100832 [Source:ZFIN;Acc:ZDB-GENE-040801-53]
82. rcn1 ENSDARG00000070006 8455 0.889 - 0.889 - - - - - - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
83. helz ENSDARG00000030560 3259 0.886 - 0.886 - - - - - - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
84. pmela ENSDARG00000091298 5179 0.886 - - - - - - 0.886 - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
85. kpna2 ENSDARG00000038066 7954 0.885 - 0.885 - - - - - - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
86. ppp3r1a ENSDARG00000092659 9729 0.882 - 0.882 - - - - - - - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
87. si:rp71-45k5.4 ENSDARG00000035679 10411 0.881 - 0.881 - - - - - - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
88. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 0.88 - 0.880 - - - - - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
89. PELP1 ENSDARG00000079313 5771 0.879 - 0.879 - - - - - - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
90. wu:fk48d07 wu:fk48d07 13245 0.879 - 0.879 - - - - - - -
91. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 0.878 - 0.878 - - - - - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
92. ptcd3 ENSDARG00000103856 2107 0.878 - 0.878 - - - - - - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
93. acadvl ENSDARG00000016687 5329 0.877 - 0.877 - - - - - - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
94. znf395a ENSDARG00000060113 3874 0.877 - 0.877 - - - - - - - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
95. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 0.875 - 0.875 - - - - - - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
96. anapc16 ENSDARG00000013822 5857 0.874 - 0.874 - - - - - - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
97. spen ENSDARG00000074245, ENSDARG00000116696 3054 0.874 - 0.874 - - - - - - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
98. aldh4a1 ENSDARG00000038207 4639 0.874 - 0.874 - - - - - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
99. hmga2 ENSDARG00000069912 20402 0.873 - - - - - - 0.873 - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
100. notch3 ENSDARG00000052139 15033 0.872 - 0.872 - - - - - - - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]

There are 873 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA