Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-25e11.10

Gene Name Gene ID Reads Annotation
si:dkey-25e11.10 si:dkey-25e11.10 955










Genes with expression patterns similar to si:dkey-25e11.10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-25e11.10 si:dkey-25e11.10 955 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. tnika ENSDARG00000056218 728 3.186 0.800 0.712 - - - 0.855 0.819 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
3. tmem47 ENSDARG00000057322 4691 3.185 0.795 0.786 - - - 0.791 0.813 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
4. tuba2 ENSDARG00000045014 1490 3.173 0.761 0.716 - - - 0.903 0.793 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
5. hoxc4a ENSDARG00000070338 1382 3.172 0.722 - - - - 0.880 0.848 - 0.722 homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
6. neurog1 ENSDARG00000056130 3924 3.046 0.724 0.735 - - - 0.740 0.847 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
7. wu:fb17g07 wu:fb17g07 10567 2.963 0.778 0.731 - - - 0.747 0.707 - -
8. slc1a3a ENSDARG00000104431 9888 2.666 0.854 - - - - 0.913 0.899 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
9. mapk12b ENSDARG00000006409 2246 2.646 0.878 - - - - 0.920 0.848 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
10. pcdh1gc5 ENSDARG00000104826 10052 2.643 0.805 - - - - 0.943 0.895 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
11. cldn5a ENSDARG00000043716 3865 2.637 0.871 - - - - 0.886 0.880 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
12. negr1 ENSDARG00000021607 1051 2.581 0.839 - - - - 0.810 0.932 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
13. gfap ENSDARG00000025301 5584 2.569 0.774 - - - - 0.940 0.855 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
14. plp1a ENSDARG00000103732 3544 2.568 0.762 - - - - 0.949 0.857 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
15. myt1b ENSDARG00000102879 5411 2.562 - 0.742 - - - 0.921 0.899 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
16. zic4 ENSDARG00000031307 1228 2.557 0.771 - - - - 0.872 0.914 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
17. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.553 0.892 - - - - 0.866 0.795 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
18. scrt2 ENSDARG00000056175 4331 2.547 0.836 - - - - 0.944 0.767 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
19. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.544 0.807 - - - - 0.948 0.789 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
20. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 2.541 0.823 - - - - 0.835 0.883 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
21. tuba1c ENSDARG00000055216 8384 2.534 0.769 - - - - 0.904 0.861 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
22. amph ENSDARG00000007663 599 2.533 0.809 - - - - 0.914 0.810 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
23. hmgb3a ENSDARG00000056725 15668 2.525 0.795 - - - - 0.910 0.820 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
24. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.522 0.760 - - - - 0.907 0.855 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
25. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.522 0.738 - - - - 0.935 0.849 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
26. atp6v0a2a ENSDARG00000035538 278 2.521 0.874 - - - - 0.864 0.783 - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
27. stmn1b ENSDARG00000033655 9491 2.519 0.787 - - - - 0.895 0.837 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
28. nova2 ENSDARG00000017673 7685 2.516 0.770 - - - - 0.862 0.884 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
29. slc17a6b ENSDARG00000041150 823 2.516 0.730 - - - - 0.924 0.862 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
30. epha4b ENSDARG00000011600 3110 2.515 0.796 - - - - 0.831 0.888 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
31. gap43 ENSDARG00000099744 4114 2.512 0.774 - - - - 0.900 0.838 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
32. CASS4 ENSDARG00000006775 760 2.511 0.739 - - - - 0.867 0.905 - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
33. tmsb ENSDARG00000054911 6411 2.501 0.740 - - - - 0.913 0.848 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
34. dpysl5a ENSDARG00000011141 1827 2.491 0.793 - - - - 0.859 0.839 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
35. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.485 0.730 - - - - 0.921 0.834 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
36. st8sia5 ENSDARG00000036584 529 2.482 0.795 - - - - 0.890 0.797 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
37. pkib ENSDARG00000053110 527 2.481 0.701 - - - - 0.850 0.930 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
38. UBE2QL1 ENSDARG00000079276 3474 2.481 0.827 - - - - 0.796 0.858 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
39. adam23a ENSDARG00000062323 580 2.48 0.789 - - - - 0.873 0.818 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
40. hoxc1a ENSDARG00000070337 1460 2.476 0.778 - - - - 0.885 0.813 - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
41. add2 ENSDARG00000074581 1402 2.467 - 0.741 - - - 0.834 0.892 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
42. cd99l2 ENSDARG00000056722 5036 2.466 0.718 - - - - 0.931 0.817 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
43. vim ENSDARG00000010008 3551 2.464 0.751 - - - - 0.851 0.862 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
44. zic1 ENSDARG00000015567 2520 2.463 0.725 - - - - 0.874 0.864 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
45. hmp19 2554 2.462 0.726 - - - - 0.901 0.835 - - HMP19 protein
46. ZFHX3 ENSDARG00000103057 7759 2.458 0.753 - - - - 0.873 0.832 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
47. dpysl3 ENSDARG00000002587 4381 2.456 0.742 - - - - 0.820 0.894 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
48. irx1b ENSDARG00000056594 2224 2.453 0.813 - - - - 0.747 0.893 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
49. AGO1 ENSDARG00000092644 4521 2.45 0.840 - - - - 0.777 0.833 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
50. DTX4 ENSDARG00000076302 2642 2.449 0.733 - - - - 0.831 0.885 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
51. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.448 0.740 - - - - 0.867 0.841 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
52. nrarpb ENSDARG00000018958 6225 2.445 0.702 - - - - 0.867 0.876 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
53. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.44 0.830 - - - - 0.852 0.758 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
54. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.437 0.779 - - - - 0.830 0.828 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
55. igsf9a ENSDARG00000075864 1870 2.435 0.798 - - - - 0.931 0.706 - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
56. CABZ01072954.1 CABZ01072954.1 2330 2.435 0.804 - - - - 0.868 0.763 - -
57. tmem35 ENSDARG00000052567 5685 2.435 0.764 - - - - 0.776 0.895 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
58. rab3ab ENSDARG00000043835 1267 2.434 0.718 - - - - 0.898 0.818 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
59. snap25a ENSDARG00000020609 4537 2.432 0.734 - - - - 0.893 0.805 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
60. nrn1a ENSDARG00000071860 1311 2.431 0.730 - - - - 0.896 0.805 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
61. stmn4l ENSDARG00000043932 654 2.427 0.846 - - - - 0.880 0.701 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
62. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.426 0.731 - - - - 0.880 0.815 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
63. slc32a1 ENSDARG00000059775 1092 2.423 0.767 - - - - 0.871 0.785 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
64. rims2b ENSDARG00000102690 275 2.419 0.718 - - - - 0.817 0.884 - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
65. dtnbb ENSDARG00000013020 280 2.418 0.754 - - - - 0.848 0.816 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
66. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.415 0.736 - - - - 0.818 0.861 - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
67. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.413 0.787 - - - - 0.838 0.788 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
68. prrt1 ENSDARG00000062208 368 2.413 0.724 - - - - 0.819 0.870 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
69. ptbp2b ENSDARG00000015901 2458 2.411 0.735 - - - - 0.869 0.807 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
70. vsnl1a ENSDARG00000023228 1584 2.4 0.803 - - - - 0.889 0.708 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
71. tle2 5014 2.399 0.727 - - - - 0.811 0.861 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
72. sox2 ENSDARG00000070913 2763 2.397 0.767 - - - - 0.805 0.825 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
73. ckbb ENSDARG00000043257 3503 2.395 0.725 - - - - 0.834 0.836 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
74. dnajc5aa ENSDARG00000042948 2885 2.394 0.728 - - - - 0.786 0.880 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
75. MAPK8IP1_1 MAPK8IP1_1 186 2.394 0.785 - - - - 0.858 0.751 - -
76. ank2b ENSDARG00000043313 3065 2.394 0.733 0.800 - - - - 0.861 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
77. nes ENSDARG00000088805 2710 2.388 0.766 - - - - 0.775 0.847 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
78. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.385 0.773 - - - - 0.854 0.758 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
79. ppp3ca ENSDARG00000004988 615 2.384 0.736 - - - - 0.885 0.763 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
80. npas3b npas3b 1446 2.383 0.755 - - - - 0.753 0.875 - -
81. hoxa9b ENSDARG00000056819 3081 2.382 0.732 - - - - 0.819 0.831 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
82. fam60al 2846 2.378 0.738 - - - - 0.886 0.754 - - family with sequence similarity 60, member A, like
83. necap1 ENSDARG00000020798 612 2.375 0.703 - - - - 0.861 0.811 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
84. sncb ENSDARG00000104945 8197 2.374 0.726 0.740 - - - 0.908 - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
85. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.374 0.742 - - - - 0.902 0.730 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
86. TUSC5 TUSC5 1436 2.371 0.740 - - - - 0.879 0.752 - -
87. EPB41L1 EPB41L1 1896 2.355 0.794 - - - - 0.768 0.793 - -
88. ptpn5 ENSDARG00000074866 548 2.354 0.757 - - - - 0.757 0.840 - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
89. sept5a ENSDARG00000013843 1206 2.352 0.742 - - - - 0.835 0.775 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
90. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.339 0.726 - - - - 0.802 0.811 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
91. rbfox3 rbfox3 1443 2.338 0.779 - - - - 0.763 0.796 - -
92. hoxb7a ENSDARG00000056030 1212 2.336 - 0.791 - - - 0.812 0.733 - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
93. mdkb ENSDARG00000020708 5393 2.333 0.720 - - - - 0.891 0.722 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
94. her12 ENSDARG00000032963 754 2.332 0.853 - - - - 0.712 0.767 - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
95. gpr144 gpr144 479 2.331 0.810 - - - - 0.709 0.812 - -
96. clstn3 ENSDARG00000073883 590 2.331 0.802 - - - - 0.765 0.764 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
97. trim2b ENSDARG00000076174 250 2.325 0.721 - - - - 0.787 0.817 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
98. adam11 ENSDARG00000079204 298 2.321 0.781 - - - - 0.801 0.739 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
99. CT030046.1 CT030046.1 190 2.318 0.734 - - - - 0.818 0.766 - -
100. ptprnb ENSDARG00000077047 2743 2.315 0.771 - - - - 0.776 0.768 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]

There are 2068 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA