Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-25c4.1

Gene Name Gene ID Reads Annotation
si:dkey-25c4.1 si:dkey-25c4.1 1










Genes with expression patterns similar to si:dkey-25c4.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-25c4.1 si:dkey-25c4.1 1 2 - - - - 1.000 1.000 - - -
2. cdk5r2b ENSDARG00000078671 20 2 - - - - 1.000 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
3. CABZ01068819.1 CABZ01068819.1 20 1.466 - - - - 0.764 0.702 - - -
4. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
5. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
6. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
7. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
8. ENSDARG00000090360 ENSDARG00000090360 0 1 - - - - 1.000 - - - -
9. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
10. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
11. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
12. si:ch211-195o19.4 si:ch211-195o19.4 2 1 - - - - 1.000 - - - -
13. slc34a1b ENSDARG00000054658 1 1 - - - - 1.000 - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
14. DKK3 DKK3 12 1 - - - - - 1.000 - - -
15. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 - - - - 1.000 - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
16. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
17. BX324215.4 BX324215.4 3 1 - - - - 1.000 - - - -
18. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
19. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
20. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
21. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
22. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
23. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
24. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
25. si:ch211-10p21.1 si:ch211-10p21.1 6 1 - - - - 1.000 - - - -
26. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
27. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - 1.000 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
28. hsd17b2 ENSDARG00000045553 14 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
29. si:dkey-30j22.5 si:dkey-30j22.5 2 1 - - - - 1.000 - - - -
30. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
31. slc26a3 slc26a3 0 1 - - - - 1.000 - - - -
32. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1 - - - - - 1.000 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
33. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
34. vip ENSDARG00000078247 10 1 - - - - - 1.000 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
35. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
36. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
37. asf1ba_1 ENSDARG00000101037 3 1 - - - - 1.000 - - - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
38. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
39. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
40. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
41. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
42. mir124-1 10 1 - - - - - 1.000 - - - microRNA 124-1
43. CU694951.2 CU694951.2 1 1 - - - - 1.000 - - - -
44. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
45. si:ch211-170d12.2 si:ch211-170d12.2 1 1 - - - - 1.000 - - - -
46. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
47. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
48. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
49. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
50. illr2 ENSDARG00000094882 1 1 - - - - 1.000 - - - - immune-related, lectin-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050311-3]
51. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
52. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
53. scpp8 ENSDARG00000093124 54 1 - - - - - 1.000 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
54. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
55. irak3 ENSDARG00000053131 16 1 - - - - 1.000 - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
56. fam5b fam5b 45 1 - - - - - 1.000 - - -
57. loxhd1b ENSDARG00000074638 6 1 - - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
58. si:ch73-196i15.5 ENSDARG00000094914 0 1 - - - - 1.000 - - - - si:ch73-196i15.5 [Source:ZFIN;Acc:ZDB-GENE-091118-32]
59. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
60. BX936443.2 BX936443.2 28 1 - - - - 1.000 - - - -
61. GPR139 14 1 - - - - 1.000 - - - - G protein-coupled receptor 139, transcript variant X1
62. EXT1 EXT1 3 1 - - - - - 1.000 - - -
63. si:dkey-58f10.4 ENSDARG00000094820 3 1 - - - - 1.000 - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
64. ETS1 ENSDARG00000024431 6 1 - - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
65. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
66. irgq2 ENSDARG00000068657 4 1 - - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
67. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
68. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
69. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
70. MYO5B ENSDARG00000062003 2 1 - - - - 1.000 - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
71. CR339041.2_1 ENSDARG00000051711 0 1 - - - - 1.000 - - - -
72. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
73. OGN 1 1 - - - - 1.000 - - - - osteoglycin
74. TACR3 TACR3 1 1 - - - - 1.000 - - - -
75. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
76. CR384075.2 CR384075.2 1 1 - - - - - 1.000 - - -
77. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
78. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
79. si:ch211-121j5.4 ENSDARG00000097160 0 1 - - - - 1.000 - - - - si:ch211-121j5.4 [Source:ZFIN;Acc:ZDB-GENE-070912-29]
80. rtn4rl2a ENSDARG00000052012 5 1 - - - - 1.000 - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
81. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
82. CABZ01061873.1 CABZ01061873.1 51 1 - - - - - 1.000 - - -
83. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
84. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1 - - - - - 1.000 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
85. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
86. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
87. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
88. ENSDARG00000095511 ENSDARG00000095511 0 1 - - - - 1.000 - - - -
89. TENM2 ENSDARG00000037122 48 1 - - - - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
90. si:dkey-218i12.3 si:dkey-218i12.3 4 1 - - - - 1.000 - - - -
91. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
92. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
93. or111-3 ENSDARG00000086633 1 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
94. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
95. il12bb ENSDARG00000054542 6 1 - - - - 1.000 - - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
96. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - 1.000 - - - -
97. SQLE SQLE 1 1 - - - - 1.000 - - - -
98. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
99. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
100. si:ch211-193k19.2 ENSDARG00000077572 35 1 - - - - 1.000 - - - - si:ch211-193k19.2 [Source:ZFIN;Acc:ZDB-GENE-060503-203]

There are 340 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA