Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-25c4.1

Gene Name Gene ID Reads Annotation
si:dkey-25c4.1 si:dkey-25c4.1 1










Genes with expression patterns similar to si:dkey-25c4.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdk5r2b ENSDARG00000078671 20 2 - - - - 1.000 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
2. si:dkey-25c4.1 si:dkey-25c4.1 1 2 - - - - 1.000 1.000 - - -
3. CABZ01068819.1 CABZ01068819.1 20 1.466 - - - - 0.764 0.702 - - -
4. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
5. CT027682.2 CT027682.2 0 1 - - - - 1.000 - - - -
6. irgq2 ENSDARG00000068657 4 1 - - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
7. ETS1 ENSDARG00000024431 6 1 - - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
8. ZBED1_2 ZBED1_2 0 1 - - - - 1.000 - - - -
9. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
10. stoml3b ENSDARG00000057035 15 1 - - - - 1.000 - - - - stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
11. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
12. TACR3 TACR3 1 1 - - - - 1.000 - - - -
13. C5AR1 1 1 - - - - 1.000 - - - - C5a anaphylatoxin chemotactic receptor
14. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
15. mir18a 0 1 - - - - 1.000 - - - - microRNA 18a
16. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
17. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
18. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
19. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
20. THBS1_1 THBS1_1 6 1 - - - - 1.000 - - - -
21. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
22. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
23. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
24. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
25. fam5b fam5b 45 1 - - - - - 1.000 - - -
26. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
27. illr2 ENSDARG00000094882 1 1 - - - - 1.000 - - - - immune-related, lectin-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050311-3]
28. si:dkey-282h22.5 ENSDARG00000092458 7 1 - - - - 1.000 - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
29. si:ch211-193k19.2 ENSDARG00000077572 35 1 - - - - 1.000 - - - - si:ch211-193k19.2 [Source:ZFIN;Acc:ZDB-GENE-060503-203]
30. dapk2 dapk2 24 1 - - - - - 1.000 - - -
31. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
32. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
33. SLC16A7 ENSDARG00000098258 4 1 - - - - 1.000 - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
34. EXT1 EXT1 3 1 - - - - - 1.000 - - -
35. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
36. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
37. MYO5B ENSDARG00000062003 2 1 - - - - 1.000 - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
38. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
39. phc2b ENSDARG00000013224 3 1 - - - - 1.000 - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
40. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
41. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
42. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
43. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
44. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
45. scpp8 ENSDARG00000093124 54 1 - - - - - 1.000 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
46. hip1r hip1r 10 1 - - - - - 1.000 - - -
47. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
48. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
49. CABZ01059923.1 CABZ01059923.1 0 1 - - - - 1.000 - - - -
50. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
51. CR339041.2_1 ENSDARG00000051711 0 1 - - - - 1.000 - - - -
52. GPR171 ENSDARG00000105008 0 1 - - - - 1.000 - - - - G protein-coupled receptor 171 [Source:ZFIN;Acc:ZDB-GENE-131121-339]
53. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
54. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
55. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
56. loxhd1b ENSDARG00000074638 6 1 - - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
57. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
58. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
59. batf ENSDARG00000011818 2 1 - - - - 1.000 - - - - basic leucine zipper transcription factor, ATF-like [Source:ZFIN;Acc:ZDB-GENE-041014-291]
60. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - 1.000 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
61. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
62. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
63. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
64. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - 1.000 - - - -
65. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
66. OGN 1 1 - - - - 1.000 - - - - osteoglycin
67. plekhs1 ENSDARG00000079227 4 1 - - - - 1.000 - - - - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
68. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
69. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
70. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
71. slc26a3 slc26a3 0 1 - - - - 1.000 - - - -
72. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
73. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
74. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
75. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - 1.000 - - -
76. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
77. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
78. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
79. cabp2b ENSDARG00000052277 119 1 - - - - - 1.000 - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
80. DUSP19 DUSP19 10 1 - - - - 1.000 - - - -
81. GPR139 14 1 - - - - 1.000 - - - - G protein-coupled receptor 139, transcript variant X1
82. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
83. si:dkey-218i12.3 si:dkey-218i12.3 4 1 - - - - 1.000 - - - -
84. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
85. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
86. si:ch211-195o19.4 si:ch211-195o19.4 2 1 - - - - 1.000 - - - -
87. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
88. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
89. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
90. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
91. USF2 ENSDARG00000020228 3 1 - - - - - 1.000 - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
92. si:ch73-196i15.5 ENSDARG00000094914 0 1 - - - - 1.000 - - - - si:ch73-196i15.5 [Source:ZFIN;Acc:ZDB-GENE-091118-32]
93. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
94. TENM2 ENSDARG00000037122 48 1 - - - - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
95. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
96. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
97. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
98. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
99. vip ENSDARG00000078247 10 1 - - - - - 1.000 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
100. slc34a1b ENSDARG00000054658 1 1 - - - - 1.000 - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]

There are 340 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA