Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-259p7.1

Gene Name Gene ID Reads Annotation
si:dkey-259p7.1 si:dkey-259p7.1 59










Genes with expression patterns similar to si:dkey-259p7.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-259p7.1 si:dkey-259p7.1 59 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:ch211-105d18.7 si:ch211-105d18.7 6 2.824 - 1.000 - - - 1.000 0.824 - -
3. si:dkey-105n5.3 si:dkey-105n5.3 9 2 1.000 - - - - 1.000 - - -
4. BX548000.1 ENSDARG00000099044 45 2 1.000 - - - - 1.000 - - -
5. si:dkey-111b14.2 si:dkey-111b14.2 25 1.854 - - - - - 1.000 - 0.854 -
6. caspbl ENSDARG00000094433 1 1.854 - - - - - 1.000 - 0.854 - caspase b, like [Source:ZFIN;Acc:ZDB-GENE-090311-53]
7. ocrl ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 90 1.853 0.943 0.910 - - - - - - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
8. slc17a9a ENSDARG00000042954 36 1.852 - 1.000 - - - - 0.852 - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
9. CU459095.1 CU459095.1 7 1.814 - - - - - 1.000 - 0.814 -
10. kcnj1a.1 ENSDARG00000091232 110 1.806 0.959 0.847 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
11. BX572619.1 ENSDARG00000089303 78 1.794 0.892 0.902 - - - - - - - wu:fa25f02 [Source:NCBI gene;Acc:562425]
12. ZNF337_24 ZNF337_24 16 1.786 - 1.000 - - - - - 0.786 -
13. CABZ01081747.2 CABZ01081747.2 9 1.784 - 1.000 - - - - 0.784 - -
14. ugt2b3 46 1.766 1.000 - - - - - 0.766 - - UDP glucuronosyltransferase 2 family, polypeptide B3
15. serpine3 ENSDARG00000057108 49 1.764 - - - - - 1.000 - 0.764 - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
16. PCDH10 PCDH10 7 1.761 - - - - - 1.000 0.761 - -
17. si:ch211-283l16.1 ENSDARG00000112586 131 1.761 - - - - - 1.000 0.761 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
18. zp2.5 ENSDARG00000086522 15 1.761 - - - - - 1.000 0.761 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
19. DPYD DPYD 52 1.761 - 1.000 - - - 0.761 - - -
20. nitr3a_1 ENSDARG00000110676 44 1.761 - - - - - 1.000 0.761 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
21. bdkrb1 ENSDARG00000020744 4 1.761 - - - - - 1.000 0.761 - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
22. si:ch211-12e1.5 si:ch211-12e1.5 14 1.761 - - - - - 1.000 0.761 - -
23. rxfp1 ENSDARG00000090071 6 1.76 - - - - - 1.000 - 0.760 - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
24. HIVEP2 HIVEP2 87 1.757 - 0.973 - - - - 0.784 - -
25. dclk1a ENSDARG00000018856 177 1.75 0.905 - - - - 0.845 - - - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
26. wnt3a ENSDARG00000058822 5 1.736 - 0.975 - - - - 0.761 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
27. wdr65 wdr65 251 1.735 0.735 - - - - 1.000 - - -
28. LRRC71 LRRC71 11 1.73 - 0.730 - - - 1.000 - - -
29. chrm4a ENSDARG00000069254 32 1.723 - 1.000 - 0.723 - - - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
30. si:ch73-389b16.2 ENSDARG00000103802 340 1.718 - 1.000 - - - 0.718 - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
31. cabp2b ENSDARG00000052277 119 1.717 - 1.000 - - - - 0.717 - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
32. grk1a ENSDARG00000058803 13 1.706 - 1.000 - - - - 0.706 - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
33. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 1.678 - 0.916 - - - 0.762 - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
34. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.667 0.896 - - - - 0.771 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
35. INHBE INHBE 95 1.667 0.870 - - - - - 0.797 - -
36. phkg1a ENSDARG00000030604, ENSDARG00000114608 85 1.662 - 0.962 - - 0.700 - - - - phosphorylase kinase, gamma 1a (muscle) [Source:ZFIN;Acc:ZDB-GENE-061103-385]
37. slc5a1 ENSDARG00000013871 4 1.625 - - - - - 0.864 0.761 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
38. FAM177B 9 1.615 - - - - - - 0.761 0.854 - family with sequence similarity 177 member B
39. ucn3l ENSDARG00000087241 29 1.61 - 0.849 - - - - 0.761 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
40. CDC42EP1 CDC42EP1 50 1.605 - 0.783 - - - 0.822 - - -
41. mtmr1b ENSDARG00000022378 168 1.601 0.863 - - - - - 0.738 - - myotubularin related protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-48]
42. satb2 ENSDARG00000061885 6 1.589 - 0.828 - - - - 0.761 - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
43. satb1a ENSDARG00000057649 250 1.586 0.711 - - - - 0.875 - - - SATB homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-031010-36]
44. ctu2 ENSDARG00000051851 68 1.578 0.877 - - - - - 0.701 - - cytosolic thiouridylase subunit 2 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040801-79]
45. si:ch211-203k16.3 ENSDARG00000069305 21 1.564 - 0.822 - - - - 0.742 - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
46. si:ch211-163l21.8 ENSDARG00000042899 724 1.556 0.777 0.779 - - - - - - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
47. hnrnpa3 ENSDARG00000059351 453 1.548 - 0.835 - - - 0.713 - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
48. lmo1 ENSDARG00000034504 260 1.528 0.732 - - - - 0.796 - - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
49. spata17 ENSDARG00000054414 64 1.499 - - - - 0.705 - 0.794 - - spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]
50. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.49 - 0.740 - - - 0.750 - - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
51. GALNTL6 ENSDARG00000040048 33 1.483 - - - - - 0.722 0.761 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
52. si:ch211-197n1.2 58 1.482 0.702 - - - - - 0.780 - - si:ch211-197n1.2, transcript variant X1
53. CR382372.2 CR382372.2 136 1.479 - - - - - 0.760 0.719 - -
54. NUFIP1 ENSDARG00000101024 229 1.464 - - - - - 0.704 0.760 - - nuclear fragile X mental retardation protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6203]
55. si:ch211-236p5.3 ENSDARG00000086418 138 1.458 0.745 0.713 - - - - - - - si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
56. THAP6 THAP6 57 1.446 - - - - - 0.708 0.738 - -
57. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - 1.000 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
58. CCSER1 ENSDARG00000075919 16 1 - - - - - 1.000 - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
59. th2 ENSDARG00000038384 1 1 - - - - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
60. hs6st3b ENSDARG00000069500 5 1 - - - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
61. zgc:92161 ENSDARG00000101749 27 1 - - - - - 1.000 - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
62. FRMPD2 ENSDARG00000074119 5 1 1.000 - - - - - - - - FERM and PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110315-2]
63. TEAD1 TEAD1 43 1 1.000 - - - - - - - -
64. mir124-6 64 1 - - - - - 1.000 - - - microRNA 124-6
65. si:ch211-262n1.5 12 1 - 1.000 - - - - - - - si:ch211-262n1.5
66. oprd1b ENSDARG00000037159 21 1 - 1.000 - - - - - - - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
67. pxmp2 ENSDARG00000003144 50 1 - 1.000 - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
68. BX601644.1 ENSDARG00000090632 2 1 1.000 - - - - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
69. rgs13 ENSDARG00000017653 8 1 1.000 - - - - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
70. nr2e1 ENSDARG00000017107 340 1 1.000 - - - - - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
71. si:ch211-76l23.5 si:ch211-76l23.5 26 1 - - - - - 1.000 - - -
72. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
73. antxr1d ENSDARG00000060845 10 1 - - - - - 1.000 - - - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
74. gyg2 ENSDARG00000033380 12 1 - - - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
75. CABZ01049058.1 CABZ01049058.1 7 1 1.000 - - - - - - - -
76. RBM20 74 1 - - - - - 1.000 - - - RNA binding motif protein 20, transcript variant X1
77. MYO9B ENSDARG00000078313 97 1 - - - - - 1.000 - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
78. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1 - - - - - 1.000 - - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
79. FDFT1 ENSDARG00000101062 6 1 - - - - - 1.000 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]
80. si:ch211-255i3.4 ENSDARG00000095152 7 1 - - - - - 1.000 - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
81. leprel4 leprel4 34 1 - - - - - 1.000 - - -
82. CABZ01083834.1 CABZ01083834.1 38 1 - - - - - 1.000 - - -
83. zgc:73228 zgc:73228 97 1 - 1.000 - - - - - - -
84. rnaset2l ENSDARG00000058413 17 1 - - - - - 1.000 - - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
85. r3hdm4 ENSDARG00000063254 201 1 - - - - - 1.000 - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
86. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - 1.000 - - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
87. bcl9l ENSDARG00000055054 128 1 1.000 - - - - - - - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
88. CU633848.1 CU633848.1 4 1 - - - - - 1.000 - - -
89. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 1 - - - - - 1.000 - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
90. CABZ01053617.1 CABZ01053617.1 5 1 - - - - - 1.000 - - -
91. grin2cb ENSDARG00000077560 9 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
92. pgap2 ENSDARG00000044596 60 1 - - - - - 1.000 - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
93. lamb1a_1 ENSDARG00000101209 13 1 1.000 - - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
94. si:dkey-222f2.7 ENSDARG00000071667 1 1 - - - - - 1.000 - - - si:dkey-222f2.7 [Source:ZFIN;Acc:ZDB-GENE-050208-727]
95. ADAMTS15 ADAMTS15 73 1 - - - - - 1.000 - - -
96. USP53 USP53 5 1 1.000 - - - - - - - -
97. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - 1.000 - - -
98. foxb1a ENSDARG00000089042 101 1 - - - - - 1.000 - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
99. ccdc136b_1 ENSDARG00000057921, ENSDARG00000075513 3 1 - 1.000 - - - - - - - coiled-coil domain containing 136b [Source:ZFIN;Acc:ZDB-GENE-081104-244]
100. il21r il21r 74 1 - - - - - 1.000 - - -

There are 1349 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA