Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-253d23.9

Gene Name Gene ID Reads Annotation
si:dkey-253d23.9 ENSDARG00000074820 24 si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]










Genes with expression patterns similar to si:dkey-253d23.9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-253d23.9 ENSDARG00000074820 24 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
2. mir219-1 101 2.64 - - - - 0.846 0.794 1.000 - - microRNA 219-1
3. foxb1a ENSDARG00000089042 101 2.618 0.733 - - - - 1.000 0.885 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
4. DHX32 DHX32 181 2.444 - - - - 0.842 0.878 - 0.724 -
5. pou3f2a ENSDARG00000070220 817 2.383 - - - - 0.782 0.767 0.834 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
6. rpz3 ENSDARG00000069728 11 2 - - - - - 1.000 1.000 - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
7. rx3 ENSDARG00000052893 43 2 1.000 - - - - 1.000 - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
8. LRRC71 LRRC71 11 2 1.000 - - - - 1.000 - - -
9. CR356223.4 CR356223.4 42 2 1.000 - - - - 1.000 - - -
10. si:ch211-202m22.1 ENSDARG00000094491 24 2 1.000 - - - - 1.000 - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
11. nr4a2a ENSDARG00000017007 140 2 - - - - - 1.000 1.000 - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
12. vwc2 ENSDARG00000076495 22 2 1.000 - - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
13. gpr88 24 2 1.000 - - - - 1.000 - - - G protein-coupled receptor 88
14. rnf165a ENSDARG00000077906 133 1.943 - - - - - 1.000 0.943 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
15. cadpsa ENSDARG00000043661 160 1.889 1.000 - - - - 0.889 - - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
16. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.88 - - - - - 0.937 0.943 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
17. efna3a ENSDARG00000014675 68 1.823 - - - - - 0.955 0.868 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
18. r3hdm4 ENSDARG00000063254 201 1.821 - - - - - 1.000 0.821 - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
19. hbaa1 ENSDARG00000097011 58 1.788 - 0.924 - - - 0.864 - - - hemoglobin, alpha adult 1 [Source:ZFIN;Acc:ZDB-GENE-980526-79]
20. grm2a ENSDARG00000004150 64 1.771 1.000 - - - - 0.771 - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
21. si:ch73-287n15.1 si:ch73-287n15.1 20 1.769 1.000 - - - - - 0.769 - -
22. CU633848.1 CU633848.1 4 1.766 - - - - - 1.000 0.766 - -
23. CCDC74B CCDC74B 8 1.766 1.000 - - - - - 0.766 - -
24. tmem179b ENSDARG00000069495 17 1.766 1.000 - - - - - 0.766 - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
25. zgc:110434 21 1.766 1.000 - - - - - 0.766 - - zgc:110434
26. tceanc2 ENSDARG00000062919 32 1.766 - - - - - 1.000 0.766 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
27. si:dkey-162b3.5 si:dkey-162b3.5 24 1.766 - - - - - 1.000 0.766 - -
28. CR339051.1 CR339051.1 9 1.766 - - - - - 1.000 0.766 - -
29. wbscr27 wbscr27 70 1.766 1.000 - - - - - 0.766 - -
30. cdc42ep2 ENSDARG00000053959 32 1.766 - - - - - 1.000 0.766 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
31. zgc:92275 ENSDARG00000034048 9 1.766 1.000 - - - - - 0.766 - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
32. zfpm2a ENSDARG00000040123 46 1.764 1.000 - - - - 0.764 - - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
33. FDFT1 ENSDARG00000101062 6 1.744 - 0.744 - - - 1.000 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]
34. wisp1b ENSDARG00000076685 38 1.742 1.000 0.742 - - - - - - - WNT1 inducible signaling pathway protein 1b [Source:ZFIN;Acc:ZDB-GENE-080220-16]
35. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1.736 - - - - - 1.000 0.736 - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
36. fut9d ENSDARG00000028098 427 1.724 - 0.983 - - 0.741 - - - - fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
37. ankrd39 ENSDARG00000041350 73 1.716 1.000 0.716 - - - - - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
38. cbln2b ENSDARG00000077151 38 1.685 - - - - - 0.873 - - 0.812 cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
39. mir219-2 129 1.675 0.805 - - - - 0.870 - - - microRNA 219-2
40. lin7b ENSDARG00000037932 150 1.675 - - - - - 0.728 0.947 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
41. CHRNB4 ENSDARG00000101677 128 1.66 0.717 - - - - - 0.943 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
42. GJD2_1 GJD2_1 3045 1.655 - - - - - 0.755 0.900 - -
43. CR524483.1 ENSDARG00000109248 86 1.644 - - - - - 0.844 0.800 - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
44. sst3 61 1.628 - - - - - 0.862 0.766 - - somatostatin 3
45. hnrnpa3 ENSDARG00000059351 453 1.627 - - - - - 0.713 0.914 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
46. csnk1g1 ENSDARG00000104342 57 1.616 - 0.894 - - - 0.722 - - - casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]
47. dscamb ENSDARG00000028118 82 1.615 - - - - - 0.767 0.848 - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
48. zgc:175008 zgc:175008 55 1.61 - 0.761 - - 0.849 - - - -
49. BX324003.1 ENSDARG00000096499 50 1.604 0.758 - - - 0.846 - - - -
50. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 1.598 0.716 - - - - - 0.882 - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
51. ZMAT1 ZMAT1 219 1.598 - 0.888 - - - - 0.710 - -
52. si:dkey-19f21.8 si:dkey-19f21.8 12 1.582 - - - - 0.818 0.764 - - -
53. STON1 368 1.579 - 0.814 - - - - 0.765 - - stonin 1
54. si:dkey-6o1.2 si:dkey-6o1.2 12 1.569 - 0.761 - - 0.808 - - - -
55. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.569 - - - - 0.791 - 0.778 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
56. tg ENSDARG00000020084 40 1.568 - 0.802 - - - - 0.766 - - thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
57. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.542 - - - - - 0.747 0.795 - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
58. brinp3b ENSDARG00000075352 14 1.537 - - - - - 0.771 0.766 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
59. si:dkey-150k17.2 si:dkey-150k17.2 40 1.534 - 0.768 - - - - 0.766 - -
60. Mar-04 Mar-04 21 1.529 0.758 - - - - 0.771 - - -
61. CU914780.1 ENSDARG00000114023 105 1.52 - - - - - 0.766 0.754 - -
62. tac3a ENSDARG00000093089, ENSDARG00000110723 75 1.511 - - - - - 0.807 0.704 - - tachykinin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-253]
63. nkx2.2b ENSDARG00000101549 266 1.502 0.744 - - - - - 0.758 - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
64. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.498 - - - - - 0.717 0.781 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
65. slc25a25b ENSDARG00000035468, ENSDARG00000116184 544 1.494 - 0.749 - - - - 0.745 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25b [Source:ZFIN;Acc:ZDB-GENE-060526-340]
66. BX897671.1 BX897671.1 10 1.494 - - - - - 0.728 0.766 - -
67. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.481 - - - - - 0.764 0.717 - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
68. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.481 - - - - - 0.750 0.731 - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
69. nbeaa ENSDARG00000070080 862 1.472 - - - - 0.705 - 0.767 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
70. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.469 - 0.761 - - - 0.708 - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
71. FGFBP3 FGFBP3 993 1.469 - - - - - 0.706 0.763 - -
72. si:dkey-106c17.3 93 1.455 - - - - - 0.749 0.706 - - si:dkey-106c17.3
73. BEND2 BEND2 92 1.454 0.704 - - - - 0.750 - - -
74. sox12 ENSDARG00000025847 681 1.442 - - - - - 0.712 0.730 - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
75. ANK1_1 ANK1_1 507 1.435 - - - - - 0.717 0.718 - -
76. CDH12 CDH12 44 1.426 - - - - - 0.721 - - 0.705
77. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - - - - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
78. zgc:113516 20 1 - - - - - 1.000 - - - zgc:113516
79. CABZ01087549.1 CABZ01087549.1 108 1 1.000 - - - - - - - -
80. BX640518.1 BX640518.1 24 1 - - - - - 1.000 - - -
81. CABZ01078431.1 CABZ01078431.1 183 1 1.000 - - - - - - - -
82. pcdh15b ENSDARG00000008127 2 1 - - - - - 1.000 - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
83. aqp1a.2 ENSDARG00000091027 6 1 - - - - - 1.000 - - - aquaporin 1a (Colton blood group), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-100409-1]
84. arhgap23b ENSDARG00000026840 6 1 - - - - - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
85. LRRK1_1 LRRK1_1 11 1 - - - - - 1.000 - - -
86. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 1.000 - - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
87. ENKD1 ENSDARG00000043550 44 1 - - - - - 1.000 - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
88. ush2a ENSDARG00000029482 10 1 - - - - - 1.000 - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
89. si:ch211-26b3.4 ENSDARG00000075491 50 1 1.000 - - - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
90. zswim7 ENSDARG00000067608 179 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
91. HSPA8 ENSDARG00000068992, ENSDARG00000114726 120 1 - - - - - 1.000 - - - heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
92. zgc:171626 zgc:171626 42 1 1.000 - - - - - - - -
93. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -
94. wdr65 wdr65 251 1 - - - - - 1.000 - - -
95. zfyve19 ENSDARG00000003642 12 1 1.000 - - - - - - - - zinc finger, FYVE domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-040718-109]
96. bbs5 ENSDARG00000039827 211 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
97. si:ch211-113a14.24 ENSDARG00000051718 183 1 - - - - - 1.000 - - - si:ch211-113a14.24 [Source:ZFIN;Acc:ZDB-GENE-121214-122]
98. si:dkey-148a12.2 si:dkey-148a12.2 1 1 1.000 - - - - - - - -
99. PHKA1 PHKA1 10 1 - - - - - 1.000 - - -
100. si:ch211-59m15.2 si:ch211-59m15.2 3 1 - - - - - 1.000 - - -

There are 1363 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA