Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-253d23.11

Gene Name Gene ID Reads Annotation
si:dkey-253d23.11 ENSDARG00000079236 128 si:dkey-253d23.11 [Source:ZFIN;Acc:ZDB-GENE-050208-631]










Genes with expression patterns similar to si:dkey-253d23.11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-253d23.11 ENSDARG00000079236 128 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-253d23.11 [Source:ZFIN;Acc:ZDB-GENE-050208-631]
2. GALNT9 ENSDARG00000006832 120 1.779 - - - - 0.884 - - 0.895 - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
3. tfb1m ENSDARG00000040727 142 1.732 - 0.843 - - - - - 0.889 - transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]
4. si:ch73-60p2.1 si:ch73-60p2.1 21 1.728 - 0.870 - - - - 0.858 - -
5. CCDC181 ENSDARG00000062021 77 1.695 0.968 0.727 - - - - - - - coiled-coil domain containing 181 [Source:ZFIN;Acc:ZDB-GENE-060503-312]
6. fbxo32 ENSDARG00000040277 93 1.665 - - - - - - 0.804 0.861 - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
7. asic4b ENSDARG00000004243 31 1.664 - - - - - 0.910 - - 0.754 acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
8. bmp6 ENSDARG00000015686 211 1.658 - - - - - - 0.820 0.838 - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
9. sp5 sp5 622 1.653 - - - - - 0.761 - 0.892 -
10. si:dkey-11e23.4 si:dkey-11e23.4 46 1.648 0.821 - - - - - 0.827 - -
11. SGSM2 ENSDARG00000063307, ENSDARG00000110752 150 1.642 - - - - - - 0.788 0.854 - small G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-131119-52]
12. SNORD27 SNORD27 181 1.628 - - - - - 0.821 - 0.807 -
13. jmjd7 ENSDARG00000035546 222 1.625 - 0.759 - - - - - 0.866 - jumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]
14. spata17 ENSDARG00000054414 64 1.616 - - - - - - 0.731 0.885 - spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]
15. b3gat2 ENSDARG00000030733 348 1.615 - - - - - 0.820 - 0.795 - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
16. QSOX2 ENSDARG00000077174 26 1.612 0.896 - - - - - 0.716 - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
17. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.61 - - - - 0.743 - - 0.867 - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
18. si:ch211-161h7.5 ENSDARG00000093044 12 1.599 0.732 0.867 - - - - - - - si:ch211-161h7.5 [Source:ZFIN;Acc:ZDB-GENE-091204-265]
19. syt16 ENSDARG00000030761 322 1.586 - - - - 0.868 0.718 - - - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
20. PDXP ENSDARG00000109823 195 1.567 0.747 - - - - 0.820 - - - pyridoxal (pyridoxine, vitamin B6) phosphatase [Source:ZFIN;Acc:ZDB-GENE-080723-69]
21. traf3ip1 ENSDARG00000010300 69 1.566 - - - - - 0.746 0.820 - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
22. DLGAP4 DLGAP4 443 1.563 - - - - - 0.771 - 0.792 -
23. bicc2 ENSDARG00000076557 77 1.546 0.727 - - - - - - 0.819 - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
24. CABZ01077217.1_1 ENSDARG00000079145 184 1.542 0.732 0.810 - - - - - - - uncharacterized LOC100007503 [Source:NCBI gene;Acc:100007503]
25. si:dkey-261e22.5 si:dkey-261e22.5 68 1.486 - 0.752 - - - 0.734 - - -
26. CEP250 CEP250 1175 1.446 - - - - - - 0.745 0.701 -
27. SLC35G1 ENSDARG00000063268 91 1.446 0.728 - - - - - 0.718 - - solute carrier family 35 member G1 [Source:HGNC Symbol;Acc:HGNC:26607]
28. CABZ01034082.1 ENSDARG00000099583 2237 1.418 - - - - - - 0.701 0.717 -
29. CT573263.1 ENSDARG00000112940 108 1 - - - - - - 1.000 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:108184006]
30. fbln1 ENSDARG00000103311 2 1 - 1.000 - - - - - - - fibulin 1 [Source:NCBI gene;Acc:30240]
31. si:ch211-267e7.22 si:ch211-267e7.22 34 1 - 1.000 - - - - - - -
32. zp3.2 ENSDARG00000090768, ENSDARG00000115457 79 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050626-121]
33. nudt19 ENSDARG00000077537 131 0.968 - 0.968 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 19 [Source:ZFIN;Acc:ZDB-GENE-081022-80]
34. tgm2l ENSDARG00000093381 218 0.964 - 0.964 - - - - - - - transglutaminase 2, like [Source:ZFIN;Acc:ZDB-GENE-050420-97]
35. espn ENSDARG00000076414 343 0.961 0.961 - - - - - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
36. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.951 0.951 - - - - - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
37. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.951 0.951 - - - - - - - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
38. slc46a3 ENSDARG00000077313 14 0.949 - - - - - - 0.949 - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
39. PRKRIR PRKRIR 261 0.949 - - - - - - 0.949 - -
40. rab11fip1a ENSDARG00000046124 69 0.949 - - - - - - 0.949 - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
41. NLRC5 ENSDARG00000024631 11 0.949 - - - - - - 0.949 - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
42. zgc:123068 ENSDARG00000017489 15 0.949 - - - - - - 0.949 - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
43. GM2A ENSDARG00000088439 55 0.949 - - - - - - 0.949 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
44. pkd2l1 ENSDARG00000022503 372 0.947 0.947 - - - - - - - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
45. MAPK8IP1 MAPK8IP1 121 0.942 0.942 - - - - - - - -
46. mtnr1aa ENSDARG00000037545, ENSDARG00000114868 40 0.942 0.942 - - - - - - - - melatonin receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-990415-155]
47. tbx21 ENSDARG00000004473, ENSDARG00000115643 30 0.938 - 0.938 - - - - - - - T-box 21 [Source:ZFIN;Acc:ZDB-GENE-080104-3]
48. SH2D2A SH2D2A 31 0.938 - 0.938 - - - - - - -
49. CR848029.2 CR848029.2 215 0.938 - 0.938 - - - - - - -
50. flvcr2b ENSDARG00000031506 170 0.938 - - - - - - 0.938 - - feline leukemia virus subgroup C cellular receptor family, member 2b [Source:ZFIN;Acc:ZDB-GENE-041210-312]
51. SLC7A1 ENSDARG00000016439, ENSDARG00000115084 54 0.937 - 0.937 - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
52. cpeb4 cpeb4 57 0.937 - 0.937 - - - - - - -
53. mxd1 ENSDARG00000032039 36 0.936 - 0.936 - - - - - - - MAX dimerization protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-246]
54. crb1 ENSDARG00000100506, ENSDARG00000110621 373 0.935 0.935 - - - - - - - - crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
55. im:6904045 ENSDARG00000115174 179 0.93 - - - - - - 0.930 - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
56. im:7162084 im:7162084 665 0.93 0.930 - - - - - - - -
57. cdr2l ENSDARG00000026834 254 0.926 - - - - - 0.926 - - - cerebellar degeneration-related protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-8171]
58. mnx2a ENSDARG00000042106 939 0.923 0.923 - - - - - - - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
59. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 0.922 0.922 - - - - - - - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
60. col5a3b ENSDARG00000101816 56 0.92 - - - - 0.920 - - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
61. dmbx1b ENSDARG00000002510 351 0.92 - - - - - - - 0.920 - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
62. wdyhv1 ENSDARG00000070403 42 0.918 0.918 - - - - - - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
63. gpr112b gpr112b 28 0.918 - - - - - - 0.918 - -
64. rereb ENSDARG00000075670 136 0.918 0.918 - - - - - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
65. trpc6a ENSDARG00000056625, ENSDARG00000111066 4 0.918 - - - - - - 0.918 - - transient receptor potential cation channel, subfamily C, member 6a [Source:ZFIN;Acc:ZDB-GENE-040724-114]
66. MCOLN2 ENSDARG00000098918 12 0.918 0.918 - - - - - - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
67. KCNK2 KCNK2 89 0.918 - - - - - - 0.918 - -
68. CU467646.1_1 ENSDARG00000075090 128 0.918 0.918 - - - - - - - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
69. desi1a ENSDARG00000033140 92 0.917 - - - - - - - 0.917 - desumoylating isopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1657]
70. ints12 ENSDARG00000091678 3261 0.917 - - - - - - - 0.917 - integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
71. phactr3a ENSDARG00000058243 150 0.916 - - - - - - - 0.916 - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
72. CD53 CD53 108 0.912 - - - - - - 0.912 - -
73. elovl4b ENSDARG00000027495 107 0.909 - - - - 0.909 - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
74. nkx2.9 ENSDARG00000020332 357 0.908 0.908 - - - - - - - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
75. PHLDB2_1 PHLDB2_1 316 0.905 0.905 - - - - - - - -
76. BEGAIN BEGAIN 39 0.904 - - - - - - - 0.904 -
77. znf384l ENSDARG00000001015 137 0.904 - - - - - - - 0.904 - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
78. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 0.904 0.904 - - - - - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
79. qtrt1 ENSDARG00000043105 213 0.903 - - - - - - - 0.903 - queuine tRNA-ribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1625]
80. Mar-03 Mar-03 44 0.903 - - - - - - - 0.903 -
81. ocstamp ENSDARG00000022139, ENSDARG00000114094 12 0.902 - - - - - - 0.902 - - osteoclast stimulatory transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050327-65]
82. BAI1_1 BAI1_1 57 0.902 - - - - - - - 0.902 -
83. fancf ENSDARG00000019250 111 0.902 - - - - - - 0.902 - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
84. nup133 ENSDARG00000010078 2373 0.901 - - - - - - - 0.901 - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
85. CACNA1H CACNA1H 34 0.901 - - - - - - - 0.901 -
86. si:ch1073-357b18.3 si:ch1073-357b18.3 87 0.901 - - - - - - - 0.901 -
87. ntn1b ENSDARG00000022531 248 0.901 0.901 - - - - - - - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
88. zfyve28 ENSDARG00000060430 797 0.9 - - - - - 0.900 - - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
89. poc1b ENSDARG00000021110, ENSDARG00000116944 254 0.9 - - - - - - - 0.900 - POC1 centriolar protein B [Source:ZFIN;Acc:ZDB-GENE-031118-54]
90. ATP6AP1L ATP6AP1L 164 0.899 - - - - - - - 0.899 -
91. nkx2.2a ENSDARG00000053298 747 0.899 0.899 - - - - - - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
92. gxylt1b ENSDARG00000022550 160 0.899 - - - - 0.899 - - - - glucoside xylosyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041210-116]
93. eif2ak2 ENSDARG00000068729 184 0.899 - - - - - - - 0.899 - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
94. zgc:165515 ENSDARG00000116300 182 0.898 - - - - - - - 0.898 - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
95. zgc:173577 ENSDARG00000098923 71 0.898 - - - - - - - 0.898 - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
96. vil1 ENSDARG00000040466 81 0.897 - - - - 0.897 - - - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
97. si:ch211-215p11.4 si:ch211-215p11.4 67 0.896 - - - - - - - 0.896 -
98. si:dkey-175g6.2 ENSDARG00000086665 39 0.896 - - - - - - - 0.896 - si:dkey-175g6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8061]
99. csrp2bp 2642 0.895 - - - - - - - 0.895 - csrp2 binding protein
100. hpcal4 ENSDARG00000070491 365 0.895 - - - - - - - 0.895 - hippocalcin like 4 [Source:ZFIN;Acc:ZDB-GENE-060503-307]

There are 1158 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA