Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-253d23.10

Gene Name Gene ID Reads Annotation
si:dkey-253d23.10 7602 si:dkey-253d23.10, transcript variant X4










Genes with expression patterns similar to si:dkey-253d23.10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-253d23.10 7602 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-253d23.10, transcript variant X4
2. TRIM35_10 TRIM35_10 484 1.783 - - 0.970 - - 0.813 - - -
3. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.754 - - 0.960 - - - 0.794 - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
4. neu1 ENSDARG00000008832 2848 1.749 - - 0.966 - - 0.783 - - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
5. itgb1bp1 ENSDARG00000007169 2723 1.726 - - 0.970 - - - 0.756 - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
6. eif3s10 ENSDARG00000076815 10822 1.718 - - 0.852 - 0.866 - - - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
7. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.714 - - 0.976 - - - 0.738 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
8. si:dkey-240e12.6 ENSDARG00000110137 674 1.703 - 0.734 0.969 - - - - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
9. myo1ea ENSDARG00000036179 891 1.703 - - 0.971 - - 0.732 - - - myosin IE, a [Source:ZFIN;Acc:ZDB-GENE-030131-5127]
10. abhd4 ENSDARG00000102887 748 1.69 - - 0.971 - - - 0.719 - - abhydrolase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-83]
11. CR954963.1 ENSDARG00000097153 1135 1.689 - - 0.973 - - - 0.716 - -
12. eppk1 ENSDARG00000096359 4315 1.688 - 0.720 0.968 - - - - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
13. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 1.684 - - 0.951 - - - 0.733 - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
14. wdr45 ENSDARG00000090219 829 1.67 - - 0.948 - - 0.722 - - - WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
15. paf1 ENSDARG00000098432 1806 1.639 - - - - - 0.777 0.862 - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
16. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 1.633 - - 0.884 - - - 0.749 - - platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
17. TMEM30B ENSDARG00000054122 1519 1.632 - - - - - 0.832 0.800 - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
18. prelid1a ENSDARG00000098671 4745 1.627 - 0.795 - - - - 0.832 - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
19. tjp3 ENSDARG00000002909 1978 1.611 - - 0.858 - - 0.753 - - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
20. stk38a ENSDARG00000019973 1343 1.605 - 0.825 - - - - 0.780 - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
21. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 1.6 - - - - - 0.885 0.715 - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
22. serinc5 ENSDARG00000008153 2863 1.589 - - - - 0.821 - 0.768 - - serine incorporator 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2918]
23. csde1_1 ENSDARG00000074758 2759 1.589 - 0.809 - - - - 0.780 - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
24. acaa2 ENSDARG00000038881 2649 1.587 - 0.867 - - - - 0.720 - - acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
25. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.585 - - 0.768 - - - 0.817 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
26. dbx1a ENSDARG00000086393 3161 1.578 - - - 0.706 0.872 - - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
27. fut9d ENSDARG00000028098 427 1.561 - - - 0.762 - - - 0.799 - fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
28. gps1 ENSDARG00000040650 3893 1.56 - 0.769 - - - - 0.791 - - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
29. CU862021.1 CU862021.1 5925 1.56 - - - - - 0.837 0.723 - -
30. tmem50a ENSDARG00000015757 3244 1.559 - 0.751 - - - - 0.808 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
31. pbx4 ENSDARG00000052150 35676 1.558 - 0.787 - - 0.771 - - - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
32. sirt2 ENSDARG00000011488 5389 1.557 - 0.749 - - - 0.808 - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
33. ufc1 ENSDARG00000022340 2618 1.553 - 0.740 - - - - 0.813 - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
34. tmem167a ENSDARG00000035914 3319 1.552 - 0.752 - - - - 0.800 - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
35. ppp2r1a ppp2r1a 11291 1.545 - - - - 0.838 - 0.707 - -
36. egfl6 ENSDARG00000045958 335 1.543 - - - - - 0.799 0.744 - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
37. man1b1 man1b1 3294 1.539 - 0.814 - - - - 0.725 - -
38. slc16a1 slc16a1 7816 1.532 - - - - 0.821 0.711 - - -
39. ck2a2a ck2a2a 1695 1.529 - 0.774 - - - 0.755 - - -
40. rcor1 ENSDARG00000031434 2733 1.527 - 0.725 - - - - 0.802 - - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
41. sdf4 ENSDARG00000070682, ENSDARG00000109313 1623 1.527 - - - - - 0.822 0.705 - - stromal cell derived factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2061]
42. rnf121 ENSDARG00000060282 1809 1.52 - 0.784 - - - - 0.736 - - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
43. zic1 ENSDARG00000015567 2520 1.511 - - - 0.781 - - - - 0.730 zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
44. vps25 ENSDARG00000059079 3747 1.511 - - - - - 0.775 0.736 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
45. tmprss13a ENSDARG00000100969 84 1.509 - - - - - 0.805 0.704 - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
46. dad1 ENSDARG00000102105 14788 1.501 - 0.776 - - - - 0.725 - - defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
47. si:dkey-67c22.2 ENSDARG00000055389 6410 1.495 - 0.790 0.705 - - - - - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
48. spcs1 ENSDARG00000059298 5327 1.495 0.746 - - - - - 0.749 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
49. ywhabl ENSDARG00000040287 39045 1.493 - - - - - 0.774 0.719 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
50. fgf8a ENSDARG00000003399 580 1.487 - - - - - 0.780 0.707 - - fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
51. tefa ENSDARG00000039117, ENSDARG00000109532 3065 1.486 - 0.773 - - - - 0.713 - - thyrotrophic embryonic factor a [Source:ZFIN;Acc:ZDB-GENE-990415-264]
52. ubald1b ENSDARG00000020976 1162 1.485 - 0.779 - - - - 0.706 - - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
53. cyfip1 ENSDARG00000044345 5483 1.47 - 0.763 - - - 0.707 - - - cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
54. si:dkeyp-86h10.3 ENSDARG00000095615 253 1.468 - - - - - 0.746 0.722 - - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
55. ak5l ENSDARG00000017739 1058 1.466 - - - - - 0.759 0.707 - - adenylate kinase 5, like [Source:ZFIN;Acc:ZDB-GENE-050410-2]
56. fbxo28 ENSDARG00000027159 9602 1.456 - - - - - 0.706 0.750 - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
57. polr3a ENSDARG00000102569 1072 1.45 - - - - - 0.744 0.706 - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
58. UTP20 ENSDARG00000099280 1672 1.449 - - - - - 0.717 0.732 - - UTP20 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-080225-38]
59. rfc5 ENSDARG00000035634 974 1.435 - - - - - - 0.719 - 0.716 replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
60. anxa3a ENSDARG00000009196, ENSDARG00000112919 2143 1.429 - - - - - 0.721 0.708 - - annexin A3a [Source:ZFIN;Acc:ZDB-GENE-040912-58]
61. emc4 ENSDARG00000039268 553 1.426 - 0.703 - - - - 0.723 - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
62. BX088708.1 BX088708.1 6503 1.426 - - - 0.724 - 0.702 - - -
63. PLEKHA6 ENSDARG00000020328 2076 1.424 - - - - - 0.709 0.715 - - pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
64. rassf7a ENSDARG00000079917 162 1.424 - - - - - 0.706 0.718 - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7a [Source:ZFIN;Acc:ZDB-GENE-091013-3]
65. USP2_1 USP2_1 544 1.423 - 0.700 - - - 0.723 - - -
66. pitpnb ENSDARG00000036005 513 1.417 - - - - - 0.703 0.714 - - phosphatidylinositol transfer protein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-895]
67. AIFM2 ENSDARG00000077549 1419 1.416 - 0.708 - - - - 0.708 - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
68. plxnb1b ENSDARG00000017211 4676 0.984 - - 0.984 - - - - - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
69. tmem47 ENSDARG00000057322 4691 0.982 - - 0.982 - - - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
70. tmeff1b ENSDARG00000056740 11253 0.981 - - 0.981 - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
71. asna1 ENSDARG00000018190 5253 0.978 - - 0.978 - - - - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
72. scrt2 ENSDARG00000056175 4331 0.977 - - 0.977 - - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
73. rbl1 ENSDARG00000008141 1217 0.976 - - 0.976 - - - - - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
74. TCEB3 2429 0.976 - - 0.976 - - - - - - transcription elongation factor B (SIII), polypeptide 3
75. daam1b ENSDARG00000009689 1520 0.976 - - 0.976 - - - - - - dishevelled associated activator of morphogenesis 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4212]
76. celsr1b ENSDARG00000058259 1219 0.975 - - 0.975 - - - - - - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
77. lsm14aa ENSDARG00000006600 2298 0.975 - - 0.975 - - - - - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
78. cry2a cry2a 2728 0.974 - - 0.974 - - - - - -
79. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 0.974 - - 0.974 - - - - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
80. PELP1 ENSDARG00000079313 5771 0.974 - - 0.974 - - - - - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
81. ACVR1B ACVR1B 4824 0.974 - - 0.974 - - - - - -
82. C11H12orf10 C11H12orf10 1305 0.973 - - 0.973 - - - - - -
83. ect2 ENSDARG00000007278 1193 0.973 - - 0.973 - - - - - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
84. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.973 - - 0.973 - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
85. hectd1 ENSDARG00000054213 3501 0.973 - - 0.973 - - - - - - HECT domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030616-153]
86. C7H16orf87 C7H16orf87 5197 0.973 - - 0.973 - - - - - -
87. mknk1 ENSDARG00000018411 749 0.973 - - 0.973 - - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
88. tfap2a ENSDARG00000059279 3741 0.973 - - 0.973 - - - - - - transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
89. laptm4a ENSDARG00000006397 1698 0.972 - - 0.972 - - - - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
90. fryl ENSDARG00000040001 3256 0.972 - - 0.972 - - - - - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
91. six1b ENSDARG00000026473 1908 0.972 - - 0.972 - - - - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
92. sdhb ENSDARG00000075768 5493 0.972 - - 0.972 - - - - - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
93. PLEKHH3 ENSDARG00000070174 2117 0.972 - - 0.972 - - - - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
94. nol12 ENSDARG00000038027 2288 0.972 - - 0.972 - - - - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
95. tlx2 ENSDARG00000011273 870 0.972 - - 0.972 - - - - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
96. dhdds ENSDARG00000039851 1135 0.972 - - 0.972 - - - - - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
97. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.971 - - 0.971 - - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
98. MYO1D ENSDARG00000036863 768 0.971 - - 0.971 - - - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
99. arcn1b ENSDARG00000031214 4529 0.971 - - 0.971 - - - - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
100. mrps18b ENSDARG00000007065 2121 0.971 - - 0.971 - - - - - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]

There are 1378 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA