Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-250k10.3

Gene Name Gene ID Reads Annotation
si:dkey-250k10.3 si:dkey-250k10.3 2










Genes with expression patterns similar to si:dkey-250k10.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-250k10.3 si:dkey-250k10.3 2 4 - 1.000 1.000 1.000 1.000 - - - -
2. tk1 ENSDARG00000102245 1 2 - - 1.000 - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
3. cart2 ENSDARG00000045832, ENSDARG00000112535 13 2 - - 1.000 - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
4. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 2 - - 1.000 - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
5. MOB2 MOB2 4 2 - - 1.000 - 1.000 - - - -
6. si:dkey-30k22.8 si:dkey-30k22.8 7 2 - - 1.000 1.000 - - - - -
7. sftpbb ENSDARG00000067566 13 2 - - 1.000 - 1.000 - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
8. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1.875 - 1.000 - 0.875 - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
9. FAM175B FAM175B 23 1.862 - 0.862 - - 1.000 - - - -
10. ENSDARG00000095340 ENSDARG00000095340 8 1.81 - 0.956 - 0.854 - - - - -
11. si:dkey-9i5.1 si:dkey-9i5.1 36 1.772 - 0.772 - - 1.000 - - - -
12. BX571712.3 ENSDARG00000098050 1 1.755 - 1.000 - - 0.755 - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
13. flh flh 47 1.735 - 1.000 0.735 - - - - - -
14. tmem167b ENSDARG00000059400 9 1.617 - 0.840 - 0.777 - - - - - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
15. vav3b ENSDARG00000073713, ENSDARG00000075962 26 1.601 - 0.873 - - 0.728 - - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
16. klhl24 klhl24 40 1.548 - 0.834 - - 0.714 - - - -
17. rpph1 33 1.536 - 0.759 - 0.777 - - - - - ribonuclease P RNA component H1
18. CR392001.1 ENSDARG00000095478 15 1.47 - 0.761 0.709 - - - - - -
19. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
20. BX005364.1 ENSDARG00000092439 1 1 - 1.000 - - - - - - -
21. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
22. ENSDARG00000089816 ENSDARG00000089816 4 1 - - 1.000 - - - - - -
23. SLC1A7 SLC1A7 3 1 - - 1.000 - - - - - -
24. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
25. pde8b ENSDARG00000063706 1 1 - - 1.000 - - - - - - phosphodiesterase 8B [Source:ZFIN;Acc:ZDB-GENE-091117-3]
26. si:dkey-56d12.4 ENSDARG00000070845 2 1 - 1.000 - - - - - - - si:dkey-56d12.4 [Source:ZFIN;Acc:ZDB-GENE-060531-147]
27. SGCZ ENSDARG00000106258 2 1 - - - 1.000 - - - - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
28. U1_18 U1_18 0 1 - - - - 1.000 - - - -
29. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
30. ZNF70_3 ZNF70_3 0 1 - - 1.000 - - - - - -
31. dock3 ENSDARG00000063180 2 1 - - 1.000 - - - - - - dedicator of cytokinesis 3 [Source:ZFIN;Acc:ZDB-GENE-100624-1]
32. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
33. cyp46a2 cyp46a2 38 1 - 1.000 - - - - - - -
34. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 - - - - 1.000 - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
35. C12H17orf62 C12H17orf62 4 1 - - 1.000 - - - - - -
36. ntm ENSDARG00000018065 1 1 - - 1.000 - - - - - - neurotrimin [Source:ZFIN;Acc:ZDB-GENE-060421-6020]
37. BX901889.2 ENSDARG00000078427 0 1 - - 1.000 - - - - - -
38. si:dkey-238f9.1 ENSDARG00000079446 51 1 - 1.000 - - - - - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
39. si:dkey-256h2.1 ENSDARG00000021849 38 1 - 1.000 - - - - - - - si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
40. si:dkey-206f10.1 ENSDARG00000032838 18 1 - 1.000 - - - - - - - si:dkey-206f10.1 [Source:ZFIN;Acc:ZDB-GENE-041014-154]
41. cyp3c1l2 cyp3c1l2 53 1 - 1.000 - - - - - - -
42. CABZ01068819.1 CABZ01068819.1 20 1 - - 1.000 - - - - - -
43. CABZ01087025.1 ENSDARG00000117232 10 1 - - 1.000 - - - - - -
44. mrc1b ENSDARG00000038822 73 1 - 1.000 - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
45. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
46. si:ch211-194e1.8 si:ch211-194e1.8 14 1 - - - 1.000 - - - - -
47. aqp10b ENSDARG00000058678 1 1 - - - 1.000 - - - - - aquaporin 10b [Source:ZFIN;Acc:ZDB-GENE-060503-57]
48. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
49. U1_15 U1_15 1 1 - - - - 1.000 - - - -
50. si:ch211-191n13.1 si:ch211-191n13.1 1 1 - - 1.000 - - - - - -
51. zgc:113293 ENSDARG00000038271 0 1 - - 1.000 - - - - - - zgc:113293 [Source:ZFIN;Acc:ZDB-GENE-050417-453]
52. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
53. si:dkey-25i10.3 si:dkey-25i10.3 5 1 - 1.000 - - - - - - -
54. SNORA77 SNORA77 2 1 - 1.000 - - - - - - -
55. PEG3_9 PEG3_9 3 1 - 1.000 - - - - - - -
56. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
57. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
58. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
59. fancm ENSDARG00000103933 1 1 - 1.000 - - - - - - - FA complementation group M [Source:ZFIN;Acc:ZDB-GENE-090929-1]
60. BX548011.3 ENSDARG00000113526 2 1 - - 1.000 - - - - - -
61. KSR1_1 KSR1_1 1 1 - - 1.000 - - - - - -
62. RP1 ENSDARG00000077687 6 1 - - 1.000 - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
63. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - - - 1.000 - - - - -
64. TOR4A_1 TOR4A_1 20 1 - 1.000 - - - - - - -
65. DNAH3 ENSDARG00000068468 3 1 - 1.000 - - - - - - - dynein axonemal heavy chain 3 [Source:ZFIN;Acc:ZDB-GENE-091112-7]
66. CABZ01032469.1 CABZ01032469.1 34 1 - 1.000 - - - - - - -
67. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 1 - 1.000 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
68. rasgrf2b ENSDARG00000002816, ENSDARG00000115886 0 1 - - 1.000 - - - - - - Ras protein-specific guanine nucleotide-releasing factor 2b [Source:ZFIN;Acc:ZDB-GENE-060504-1]
69. WASF3 WASF3 1 1 - - 1.000 - - - - - -
70. CU929036.1 CU929036.1 7 1 - - 1.000 - - - - - -
71. itgbl1 ENSDARG00000040985 705 1 - 1.000 - - - - - - - integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
72. SIPA1L2 ENSDARG00000061640 2 1 - - 1.000 - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
73. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - 1.000 - - - - - -
74. CR450780.4 CR450780.4 0 1 - - 1.000 - - - - - -
75. ft2 ENSDARG00000109567 5 1 - - 1.000 - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
76. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
77. mlxip ENSDARG00000059474 12 1 - - - - 1.000 - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
78. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
79. si:ch211-57m13.1 ENSDARG00000095927 1 1 - 1.000 - - - - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
80. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
81. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
82. slc34a1a ENSDARG00000028824 35 1 - 1.000 - - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
83. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
84. AL929580.1 AL929580.1 1 1 - 1.000 - - - - - - -
85. NELL2A ENSDARG00000090690 840 1 - 1.000 - - - - - - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
86. CR391962.2 CR391962.2 0 1 - - - - 1.000 - - - -
87. disp2 ENSDARG00000042846 53 1 - 1.000 - - - - - - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
88. si:ch211-67f13.8 ENSDARG00000079155 7 1 - 1.000 - - - - - - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
89. slc47a2 2 1 - - - 1.000 - - - - - solute carrier family 47 (multidrug and toxin extrusion), member 2
90. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
91. gnat2 ENSDARG00000042529 112 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
92. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
93. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
94. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
95. AL954698.2 ENSDARG00000102132 28 1 - - 1.000 - - - - - -
96. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
97. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
98. klf9 ENSDARG00000068194 5 1 - - 1.000 - - - - - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
99. si:dkey-240n22.3 ENSDARG00000095013 0 1 - - - - 1.000 - - - - si:dkey-240n22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-409]
100. si:ch73-186j5.4 si:ch73-186j5.4 70 1 - - - 1.000 - - - - -

There are 654 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA