Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-247i3.6

Gene Name Gene ID Reads Annotation
si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]










Genes with expression patterns similar to si:dkey-247i3.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
2. CABZ01078314.1 CABZ01078314.1 44 2.667 - - - 0.778 0.968 - 0.921 - -
3. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 2.431 - 0.862 - 0.769 - 0.800 - - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
4. C6H21orf58 C6H21orf58 14 2 1.000 1.000 - - - - - - -
5. asb11 ENSDARG00000056561 39 1.984 - 1.000 - - - - 0.984 - - ankyrin repeat and SOCS box containing 11 [Source:ZFIN;Acc:ZDB-GENE-070112-532]
6. cacna2d2 cacna2d2 16 1.921 - 1.000 - - - - 0.921 - -
7. AL928852.1 AL928852.1 23 1.846 - 1.000 - - 0.846 - - - -
8. CABZ01071446.1 CABZ01071446.1 4 1.826 0.905 - - - - - 0.921 - -
9. crmp1 ENSDARG00000056742 332 1.821 0.932 - - - - - 0.889 - - collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
10. cbln2b ENSDARG00000077151 38 1.817 - 1.000 - - - - 0.817 - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
11. btr09 ENSDARG00000054805, ENSDARG00000115798 20 1.784 - 1.000 - - - - - 0.784 - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
12. FNDC3A ENSDARG00000105503 11 1.783 - 0.862 - - - - 0.921 - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
13. b3gat1 b3gat1 77 1.782 - 1.000 - - - - 0.782 - -
14. lrrc4bb ENSDARG00000014792 47 1.78 - - - 0.884 - - 0.896 - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
15. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1.774 - - - 0.932 0.842 - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
16. foxf2b ENSDARG00000070389 67 1.735 - 1.000 0.735 - - - - - - forkhead box F2b [Source:ZFIN;Acc:ZDB-GENE-041001-130]
17. SAC3D1 SAC3D1 72 1.715 0.853 0.862 - - - - - - -
18. KCNJ12 KCNJ12 17 1.709 - 1.000 - - - - - 0.709 -
19. zgc:92590 ENSDARG00000040282 13 1.695 0.774 - - - - - 0.921 - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
20. SLC44A1 SLC44A1 43 1.682 - - - - 0.761 - 0.921 - -
21. MFAP4 ENSDARG00000090783 8 1.682 - 0.761 - - - - 0.921 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
22. h2afy2 ENSDARG00000087897 585 1.673 - - - - 0.946 - 0.727 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
23. si:dkey-189d19.2 si:dkey-189d19.2 45 1.665 0.947 - - - 0.718 - - - -
24. zfyve26 ENSDARG00000040131 87 1.658 0.905 0.753 - - - - - - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
25. BAD BAD 1322 1.658 0.929 - - - - - 0.729 - -
26. si:ch211-241j12.3 ENSDARG00000043963 128 1.648 - - - 0.848 - 0.800 - - - si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
27. aff4 ENSDARG00000001857 134 1.639 - - - - 0.718 - 0.921 - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
28. SNORD65 SNORD65 35 1.632 0.905 - - - - - 0.727 - -
29. si:dkey-18p12.4 ENSDARG00000079703 21 1.629 0.896 - - - 0.733 - - - - si:dkey-18p12.4 [Source:ZFIN;Acc:ZDB-GENE-070912-408]
30. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1.606 - 0.856 - 0.750 - - - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
31. mipep ENSDARG00000055344 63 1.565 - 0.838 - - - - 0.727 - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
32. sc:d0661 sc:d0661 12 1.559 - 0.856 - - - - - - 0.703
33. PRF1 PRF1 69 1.557 0.732 0.825 - - - - - - -
34. col5a3b ENSDARG00000101816 56 1.557 0.812 - - - - - 0.745 - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
35. cbln10 ENSDARG00000023157 17 1.553 0.702 0.851 - - - - - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
36. MYOCD 46 1.544 - 0.840 - - 0.704 - - - - myocardin, transcript variant X2
37. tnnt2a ENSDARG00000020610 313 1.541 0.799 - - 0.742 - - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
38. pcp4l1 ENSDARG00000023181 117 1.529 0.710 - - 0.819 - - - - - Purkinje cell protein 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040724-35]
39. CABZ01065679.1 ENSDARG00000098342 99 1.524 - - - - - 0.806 - 0.718 -
40. lrp1bb ENSDARG00000061517 172 1.523 0.714 0.809 - - - - - - - low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
41. FP085391.3 FP085391.3 14 1.513 - - 0.778 - - - - 0.735 -
42. SNORD94 SNORD94 57 1.505 - 0.760 - - - - 0.745 - -
43. itfg2 ENSDARG00000002174 114 1.482 - 0.756 - 0.726 - - - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
44. scn4ab ENSDARG00000034588 109 1.47 0.756 - - - 0.714 - - - - sodium channel, voltage-gated, type IV, alpha, b [Source:ZFIN;Acc:ZDB-GENE-051201-1]
45. si:ch211-67f13.8 ENSDARG00000079155 7 1 - 1.000 - - - - - - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
46. SLC13A5 SLC13A5 31 1 - 1.000 - - - - - - -
47. CU179643.1 ENSDARG00000086489 25 1 - 1.000 - - - - - - -
48. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1 - 1.000 - - - - - - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
49. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - 1.000 - - - - - - -
50. mir30b 4 1 1.000 - - - - - - - - microRNA 30b
51. admb ENSDARG00000069027 67 1 1.000 - - - - - - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
52. dio2 ENSDARG00000094857 17 1 1.000 - - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
53. klc4_1 ENSDARG00000086985 22 1 1.000 - - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
54. crybb1l2 ENSDARG00000016793 723 1 1.000 - - - - - - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
55. SNORA7 SNORA7 100 1 - 1.000 - - - - - - -
56. UNC13C 119 1 - 1.000 - - - - - - - unc-13 homolog C (C. elegans)
57. BX571712.3 ENSDARG00000098050 1 1 - 1.000 - - - - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
58. SLC38A8 SLC38A8 17 1 1.000 - - - - - - - -
59. TXNRD2 TXNRD2 14 1 - 1.000 - - - - - - -
60. itgbl1 ENSDARG00000040985 705 1 - 1.000 - - - - - - - integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
61. zgc:113425 ENSDARG00000026616 29 1 1.000 - - - - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
62. C10H5orf42 C10H5orf42 5 1 1.000 - - - - - - - -
63. si:dkey-165i8.5 si:dkey-165i8.5 21 1 - 1.000 - - - - - - -
64. zp2l1 ENSDARG00000055415, ENSDARG00000110573 2 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, like 1 [Source:ZFIN;Acc:ZDB-GENE-060818-3]
65. fancm ENSDARG00000103933 1 1 - 1.000 - - - - - - - FA complementation group M [Source:ZFIN;Acc:ZDB-GENE-090929-1]
66. klhl42 ENSDARG00000006011 46 1 1.000 - - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
67. si:dkey-103k4.5 si:dkey-103k4.5 11 1 - 1.000 - - - - - - -
68. si:dkey-238f9.1 ENSDARG00000079446 51 1 - 1.000 - - - - - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
69. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 1 1.000 - - - - - - - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
70. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1 1.000 - - - - - - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
71. disp2 ENSDARG00000042846 53 1 - 1.000 - - - - - - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
72. il15l ENSDARG00000007743, ENSDARG00000109605 17 1 - 1.000 - - - - - - - interleukin 15, like [Source:ZFIN;Acc:ZDB-GENE-041111-173]
73. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1 - 1.000 - - - - - - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
74. irf3 ENSDARG00000076251 8 1 - 1.000 - - - - - - - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
75. rasal3 ENSDARG00000089933 17 1 1.000 - - - - - - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
76. socs1a ENSDARG00000038095 20 1 1.000 - - - - - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
77. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - 1.000 - - - - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
78. nipa1 ENSDARG00000055917 132 1 1.000 - - - - - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
79. RBBP6_1 RBBP6_1 1 1 - 1.000 - - - - - - -
80. si:dkey-3b8.4 si:dkey-3b8.4 13 1 1.000 - - - - - - - -
81. BX005364.1 ENSDARG00000092439 1 1 - 1.000 - - - - - - -
82. crhbp ENSDARG00000024831 63 1 - 1.000 - - - - - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
83. AL929580.1 AL929580.1 1 1 - 1.000 - - - - - - -
84. CABZ01048675.1 CABZ01048675.1 4 1 - 1.000 - - - - - - -
85. TENM2_1 ENSDARG00000037122 67 1 - 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
86. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - 1.000 - - - - - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
87. si:dkey-71l1.1 ENSDARG00000052411 11 1 1.000 - - - - - - - - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
88. si:ch211-57m13.1 ENSDARG00000095927 1 1 - 1.000 - - - - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
89. otx1a 1607 1 1.000 - - - - - - - - orthodenticle homeobox 1a
90. si:dkey-206f10.1 ENSDARG00000032838 18 1 - 1.000 - - - - - - - si:dkey-206f10.1 [Source:ZFIN;Acc:ZDB-GENE-041014-154]
91. FP103003.1_1 FP103003.1_1 6 1 1.000 - - - - - - - -
92. lratb 3 1 - 1.000 - - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
93. v2rx3 ENSDARG00000061873 1 1 - 1.000 - - - - - - - vomeronasal 2 receptor, x3 [Source:ZFIN;Acc:ZDB-GENE-050419-262]
94. FRMPD2 ENSDARG00000074119 5 1 1.000 - - - - - - - - FERM and PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110315-2]
95. TEAD1 TEAD1 43 1 1.000 - - - - - - - -
96. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 - 1.000 - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
97. b3galtlb b3galtlb 27 1 - 1.000 - - - - - - -
98. BX088691.1 BX088691.1 9 1 - 1.000 - - - - - - -
99. si:dkey-260c8.5 si:dkey-260c8.5 8 1 - 1.000 - - - - - - -
100. rgs13 ENSDARG00000017653 8 1 1.000 - - - - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]

There are 1069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA