Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-23o4.6

Gene Name Gene ID Reads Annotation
si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]










Genes with expression patterns similar to si:dkey-23o4.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 3 - - - 1.000 1.000 - 1.000 - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
2. nfixb ENSDARG00000061836 7 2 - - - 1.000 - - 1.000 - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
3. si:dkey-265c15.5 si:dkey-265c15.5 1 2 - - - 1.000 - - 1.000 - -
4. EDN3 14 2 - - - - 1.000 - 1.000 - - endothelin 3
5. BX649490.1 ENSDARG00000091718 7 2 - - - - 1.000 - 1.000 - - titin-like [Source:NCBI gene;Acc:101883412]
6. si:ch211-11i5.3 si:ch211-11i5.3 7 2 - - - - 1.000 - 1.000 - -
7. CU570791.1 ENSDARG00000098597 4 2 - - - 1.000 - - 1.000 - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
8. si:dkey-119g10.4 si:dkey-119g10.4 7 2 - - - 1.000 1.000 - - - -
9. gper gper 4 2 - - - 1.000 - - 1.000 - -
10. MYO7B MYO7B 8 2 - - - - 1.000 - 1.000 - -
11. trhrb ENSDARG00000036159 11 1.672 - - - - 0.756 - 0.916 - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
12. vrk2 ENSDARG00000021547 45 1.5 - - - - 0.752 - 0.748 - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
13. si:dkey-4p15.5 ENSDARG00000086272 7 1 - - - - - - 1.000 - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
14. neurod6b ENSDARG00000020794 164 1 - - - - - - 1.000 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
15. SNORD83 SNORD83 43 1 - - - - 1.000 - - - -
16. si:ch211-203b20.4 ENSDARG00000091790 3 1 - - - - - - 1.000 - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]
17. ftr09 ENSDARG00000095345 0 1 - - - 1.000 - - - - - finTRIM family, member 9 [Source:ZFIN;Acc:ZDB-GENE-070912-223]
18. myo7aa ENSDARG00000099871 23 1 - - - - - - 1.000 - - myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
19. CT583625.1 ENSDARG00000093788 10 1 - - - 1.000 - - - - -
20. BX088718.1 ENSDARG00000101847 3 1 - - - - 1.000 - - - -
21. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - 1.000 - - - - -
22. pi15b ENSDARG00000061292 1 1 - - - - 1.000 - - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
23. si:ch211-187d1.1 si:ch211-187d1.1 4 1 - - - - - - 1.000 - -
24. gltpb ENSDARG00000077962 5 1 - - - 1.000 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
25. AL954173.3 AL954173.3 1 1 - - - 1.000 - - - - -
26. CLCN2 CLCN2 8 1 - - - - - - 1.000 - -
27. tmem174 ENSDARG00000035388 2 1 - - - - 1.000 - - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
28. dock11 ENSDARG00000062485 17 1 - - - - - - 1.000 - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
29. ALOX5_1 ALOX5_1 0 1 - - - - 1.000 - - - -
30. 5_8S_rRNA 5_8S_rRNA 24 1 - - - - - - 1.000 - -
31. pdk2 pdk2 32 1 - - - - - - 1.000 - -
32. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1 - - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
33. CABZ01085394.1 CABZ01085394.1 0 1 - - - - 1.000 - - - -
34. dand5 ENSDARG00000036471 8 1 - - - - - - 1.000 - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
35. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - 1.000 - - - - -
36. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - - - 1.000 - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
37. U5 U5 0 1 - - - 1.000 - - - - -
38. trim62 ENSDARG00000060901 12 1 - - - - 1.000 - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
39. rprma ENSDARG00000053383 12 1 - - - - - - 1.000 - - reprimo, TP53 dependent G2 arrest mediator candidate a [Source:ZFIN;Acc:ZDB-GENE-050522-218]
40. zgc:162235 zgc:162235 9 1 - - - - 1.000 - - - -
41. or111-11 ENSDARG00000041019 5 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
42. men1_1 ENSDARG00000089456 3 1 - - - - 1.000 - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
43. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - - 1.000 - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
44. calhm3 ENSDARG00000079602 4 1 - - - 1.000 - - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
45. CR626874.1 ENSDARG00000100141 55 1 - - - - - - 1.000 - -
46. si:ch211-113a14.17 15 1 - - - - - - 1.000 - - si:ch211-113a14.17
47. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 - - - - 1.000 - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
48. nfil3-4 ENSDARG00000092346 3 1 - - - - 1.000 - - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
49. ccbe1 ENSDARG00000086158 0 1 - - - 1.000 - - - - - collagen and calcium binding EGF domains 1 [Source:ZFIN;Acc:ZDB-GENE-090506-7]
50. si:dkey-183p4.10 ENSDARG00000077907 5 1 - - - 1.000 - - - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
51. aox1 aox1 14 1 - - - - - - 1.000 - -
52. CU183952.2 CU183952.2 6 1 - - - 1.000 - - - - -
53. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - 1.000 - - - -
54. ttc6 ENSDARG00000104125 7 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
55. zgc:172014 ENSDARG00000101775 3 1 - - - - - - 1.000 - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
56. SOX8 SOX8 22 1 - - - - - - 1.000 - -
57. SNORD15_1 SNORD15_1 1 1 - - - - 1.000 - - - -
58. il10 ENSDARG00000078147 3 1 - - - - - - 1.000 - - interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
59. shank3a ENSDARG00000063332 5 1 - - - - 1.000 - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
60. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - 1.000 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
61. RGS14 RGS14 15 1 - - - - - - 1.000 - -
62. si:dkeyp-75b4.10 ENSDARG00000079043 7 1 - - - - - - 1.000 - - si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
63. gpr158 gpr158 52 1 - - - - - - 1.000 - -
64. SLC25A22_1 SLC25A22_1 3 1 - - - - 1.000 - - - -
65. phox2bb ENSDARG00000091029 2 1 - - - - 1.000 - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
66. si:ch211-160d14.9 8 1 - - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
67. CR388152.1 CR388152.1 7 1 - - - - - - 1.000 - -
68. rdh1 ENSDARG00000017882 24 1 - - - - - - 1.000 - - retinol dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-030912-15]
69. BX530067.1 BX530067.1 20 1 - - - - - - 1.000 - -
70. CABZ01117474.1 CABZ01117474.1 2 1 - - - - 1.000 - - - -
71. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 1 - - - 1.000 - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
72. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - 1.000 - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
73. si:dkey-20j3.4 si:dkey-20j3.4 4 1 - - - - 1.000 - - - -
74. csrp1b ENSDARG00000030980 2 1 - - - 1.000 - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
75. dio2 ENSDARG00000094857 17 1 - - - 1.000 - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
76. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - 1.000 - - - -
77. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 - - - - - - 1.000 - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
78. SGPP2 ENSDARG00000079608 1 1 - - - - 1.000 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
79. alkbh7 ENSDARG00000037906 9 1 - - - - - - 1.000 - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
80. cd74a ENSDARG00000009087 20 1 - - - - - - 1.000 - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
81. CR381673.2 ENSDARG00000103241 7 1 - - - - - - 1.000 - -
82. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - 1.000 - - - -
83. BX548011.3 ENSDARG00000113526 2 1 - - - 1.000 - - - - -
84. fam207a ENSDARG00000071500 106 1 - - - - - - 1.000 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
85. CR382281.1 ENSDARG00000100098 135 1 - - - - 1.000 - - - -
86. CT025934.2 CT025934.2 22 1 - - - - - - 1.000 - -
87. lrp6 ENSDARG00000100143 1 1 - - - - - - 1.000 - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
88. cx28.9 ENSDARG00000041797 12 1 - - - - - - 1.000 - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
89. si:rp71-18l21.1 si:rp71-18l21.1 2 1 - - - - 1.000 - - - -
90. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
91. PLCG2 ENSDARG00000068763 11 1 - - - 1.000 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
92. nfixa ENSDARG00000043226 14 1 - - - 1.000 - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
93. fabp10a ENSDARG00000038439 4 1 - - - - 1.000 - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
94. coch ENSDARG00000024032 7 1 - - - - - - 1.000 - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
95. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - - - 1.000 - - - - -
96. BX897720.4 BX897720.4 0 1 - - - - 1.000 - - - -
97. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - - - - 1.000 - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
98. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - 1.000 - -
99. glis1b ENSDARG00000027933 14 1 - - - 1.000 - - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
100. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - 1.000 - - - - -

There are 657 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA