Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-239h2.3

Gene Name Gene ID Reads Annotation
si:dkey-239h2.3 ENSDARG00000092033 398 si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]










Genes with expression patterns similar to si:dkey-239h2.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-239h2.3 ENSDARG00000092033 398 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
2. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 1.854 - 0.955 - - - - - 0.899 - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
3. rab34a ENSDARG00000045628, ENSDARG00000113347 358 1.846 - 0.990 - - - - 0.856 - - RAB34, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041010-197]
4. tecra ENSDARG00000101585 609 1.727 - - - 0.885 - - - 0.842 - trans-2,3-enoyl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-090930-1]
5. crls1 ENSDARG00000038000 1088 1.706 - 0.976 - - - - - 0.730 - cardiolipin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2519]
6. vwa8 ENSDARG00000078593, ENSDARG00000112243, ENSDARG00000114725 533 1.701 - 0.988 - 0.713 - - - - - von Willebrand factor A domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-070912-407]
7. igf2r ENSDARG00000006094 1578 1.699 - 0.971 - - - - - 0.728 - insulin-like growth factor 2 receptor [Source:ZFIN;Acc:ZDB-GENE-041014-300]
8. si:ch211-114n24.6 ENSDARG00000036700 2243 1.678 - 0.930 - - - - 0.748 - - si:ch211-114n24.6 [Source:ZFIN;Acc:ZDB-GENE-120214-26]
9. meis3 ENSDARG00000002795 2509 1.675 - 0.946 - - - - 0.729 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
10. CR774186.2 CR774186.2 104 1.665 - - - - - - 0.781 0.884 -
11. dnal1 ENSDARG00000034042 339 1.642 - - - 0.818 - - 0.824 - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
12. asl ENSDARG00000033361 295 1.636 - - - 0.876 - - - 0.760 - argininosuccinate lyase [Source:ZFIN;Acc:ZDB-GENE-040426-1152]
13. desi1a ENSDARG00000033140 92 1.633 - - - - - - - 0.906 0.727 desumoylating isopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1657]
14. immp2l ENSDARG00000004925 215 1.621 - - - - - - 0.751 0.870 - inner mitochondrial membrane peptidase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040808-9]
15. wt1a ENSDARG00000031420 166 1.614 - - - - - - 0.793 0.821 - wilms tumor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-558]
16. ktn1 ENSDARG00000032802 6251 1.611 - 0.908 - 0.703 - - - - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
17. tnrc5 412 1.605 - - - 0.820 - - - 0.785 - trinucleotide repeat containing 5
18. CR388132.2 ENSDARG00000104041 640 1.603 0.741 - - - - - - 0.862 -
19. mtrf1l ENSDARG00000060005 177 1.594 - - - 0.883 - - 0.711 - - mitochondrial translational release factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-8198]
20. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 1.585 - - - - - 0.712 - 0.873 - eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
21. SLC6A16 SLC6A16 630 1.576 0.717 - - - - - - 0.859 -
22. sin3aa ENSDARG00000079716 580 1.57 - - - 0.799 - - - 0.771 - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
23. pax3a ENSDARG00000010192 626 1.563 - - - 0.757 - - - 0.806 - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
24. ATP6AP1L_1 ATP6AP1L_1 508 1.521 - - - 0.812 - - - 0.709 -
25. pus3 ENSDARG00000028976 52 1.521 - - - - - 0.754 0.767 - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
26. osgep ENSDARG00000045846 738 1.49 0.701 - - - - - - 0.789 - O-sialoglycoprotein endopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-7880]
27. kcnj13 ENSDARG00000043443 700 1.477 - - - 0.758 - - 0.719 - - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
28. tmem88a ENSDARG00000056920 536 1.471 - - - 0.739 - - 0.732 - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
29. dixdc1a ENSDARG00000025302 716 1.42 0.706 - - - - - 0.714 - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
30. nfe2l2a ENSDARG00000042824 1707 0.996 - 0.996 - - - - - - - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
31. MGST1 MGST1 1958 0.995 - 0.995 - - - - - - -
32. zgc:173990 zgc:173990 161 0.995 - 0.995 - - - - - - -
33. FBXW12 FBXW12 658 0.994 - 0.994 - - - - - - -
34. taf1a ENSDARG00000052471 252 0.994 - 0.994 - - - - - - - TATA box binding protein (TBP)-associated factor, RNA polymerase I, A [Source:ZFIN;Acc:ZDB-GENE-041014-272]
35. BTBD2 BTBD2 610 0.994 - 0.994 - - - - - - -
36. tyw1 ENSDARG00000062987 1759 0.993 - 0.993 - - - - - - - tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-688]
37. arg2 ENSDARG00000039269 571 0.992 - 0.992 - - - - - - - arginase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1334]
38. RRP8 ENSDARG00000071652, ENSDARG00000116083 776 0.992 - 0.992 - - - - - - - ribosomal RNA processing 8, methyltransferase, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8898]
39. C11H6orf120 C11H6orf120 824 0.992 - 0.992 - - - - - - -
40. chchd6a ENSDARG00000003206 421 0.992 - 0.992 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-040930-2]
41. tmem201 ENSDARG00000077307 453 0.991 - 0.991 - - - - - - - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
42. cactin ENSDARG00000059866 553 0.991 - 0.991 - - - - - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
43. si:ch211-93g23.2 ENSDARG00000070558 105 0.991 - 0.991 - - - - - - - si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
44. galnt10 ENSDARG00000103825 320 0.991 - 0.991 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
45. si:rp71-36n21.1 93 0.991 - 0.991 - - - - - - - si:rp71-36n21.1
46. fmnl2b ENSDARG00000075041 1744 0.991 - 0.991 - - - - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
47. gfm2 ENSDARG00000005561 302 0.991 - 0.991 - - - - - - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
48. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 0.991 - 0.991 - - - - - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
49. r3hdm4 ENSDARG00000063254 201 0.991 - 0.991 - - - - - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
50. katna1 ENSDARG00000021827 221 0.991 - 0.991 - - - - - - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
51. C3H16orf89 C3H16orf89 449 0.991 - 0.991 - - - - - - -
52. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 0.991 - 0.991 - - - - - - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
53. ZC3H8 ZC3H8 114 0.991 - 0.991 - - - - - - -
54. marveld1 ENSDARG00000011724 1025 0.991 - 0.991 - - - - - - - MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
55. nf2b ENSDARG00000025567 1441 0.991 - 0.991 - - - - - - - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
56. acot13 ENSDARG00000061728, ENSDARG00000114746 516 0.99 - 0.990 - - - - - - - acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437]
57. bcr ENSDARG00000079286 578 0.99 - 0.990 - - - - - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
58. SENP1 SENP1 1122 0.99 - 0.990 - - - - - - -
59. COQ7 ENSDARG00000062594 989 0.99 - 0.990 - - - - - - - coenzyme Q7 homolog, ubiquinone (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-262]
60. si:dkey-262g12.4 si:dkey-262g12.4 144 0.99 - 0.990 - - - - - - -
61. ABI3_1 ABI3_1 511 0.99 - 0.990 - - - - - - -
62. dlg5a ENSDARG00000074059 1834 0.99 - 0.990 - - - - - - - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
63. NUMA1 141 0.99 - 0.990 - - - - - - - nuclear mitotic apparatus protein 1, transcript variant X2
64. scrib ENSDARG00000000861 248 0.99 - 0.990 - - - - - - - scribbled planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-030616-572]
65. fam222ba ENSDARG00000059886 1648 0.99 - 0.990 - - - - - - - family with sequence similarity 222, member Ba [Source:ZFIN;Acc:ZDB-GENE-060526-355]
66. CABZ01006254.1 CABZ01006254.1 95 0.99 - 0.990 - - - - - - -
67. anapc10 ENSDARG00000090152 1406 0.99 - 0.990 - - - - - - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
68. flr ENSDARG00000038024 562 0.99 - 0.990 - - - - - - - fleer [Source:ZFIN;Acc:ZDB-GENE-070117-2066]
69. mtmr7b ENSDARG00000070412, ENSDARG00000112046 724 0.99 - 0.990 - - - - - - - myotubularin related protein 7b [Source:ZFIN;Acc:ZDB-GENE-050913-66]
70. cab39 ENSDARG00000043451 1326 0.99 - 0.990 - - - - - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
71. tmem136a ENSDARG00000024920 535 0.99 - 0.990 - - - - - - - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
72. C15H11orf57 C15H11orf57 860 0.99 - 0.990 - - - - - - -
73. mtm1 ENSDARG00000037560 1086 0.99 - 0.990 - - - - - - - myotubularin 1 [Source:ZFIN;Acc:ZDB-GENE-051113-128]
74. ufsp2 ENSDARG00000056369, ENSDARG00000115753 998 0.99 - 0.990 - - - - - - - ufm1-specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8726]
75. mrpl19 ENSDARG00000011885 2208 0.99 - 0.990 - - - - - - - mitochondrial ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040801-55]
76. si:dkey-51e6.1 ENSDARG00000042133 564 0.989 - 0.989 - - - - - - - si:dkey-51e6.1 [Source:ZFIN;Acc:ZDB-GENE-041014-198]
77. zgc:113314 ENSDARG00000069453 833 0.989 - 0.989 - - - - - - - zgc:113314 [Source:ZFIN;Acc:ZDB-GENE-050913-19]
78. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.989 - 0.989 - - - - - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
79. her2 ENSDARG00000038205 3219 0.989 - 0.989 - - - - - - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
80. slc33a1 ENSDARG00000020085 899 0.989 - 0.989 - - - - - - - solute carrier family 33 (acetyl-CoA transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1241]
81. nat10 ENSDARG00000054259 1310 0.989 - 0.989 - - - - - - - N-acetyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1543]
82. mtfr1l ENSDARG00000003940, ENSDARG00000111141 3047 0.989 - 0.989 - - - - - - - mitochondrial fission regulator 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-6228]
83. hbegfa ENSDARG00000075121 1865 0.989 - 0.989 - - - - - - - heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
84. parvb ENSDARG00000019117 1042 0.989 - 0.989 - - - - - - - parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]
85. cxcl-c1c cxcl-c1c 159 0.988 - 0.988 - - - - - - -
86. arhgap12a ENSDARG00000008548 757 0.988 - 0.988 - - - - - - - Rho GTPase activating protein 12a [Source:ZFIN;Acc:ZDB-GENE-050809-38]
87. CT583658.1 CT583658.1 561 0.988 - 0.988 - - - - - - -
88. aif1l ENSDARG00000009336 1340 0.988 - 0.988 - - - - - - - allograft inflammatory factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9646]
89. zgc:101663 ENSDARG00000037852 830 0.988 - 0.988 - - - - - - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
90. jarid2b ENSDARG00000062268 2206 0.988 - 0.988 - - - - - - - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
91. BAD BAD 1322 0.988 - 0.988 - - - - - - -
92. tbk1 ENSDARG00000103095 320 0.988 - 0.988 - - - - - - - TANK-binding kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060512-359]
93. mios ENSDARG00000102587 684 0.988 - 0.988 - - - - - - - missing oocyte, meiosis regulator, homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-856]
94. acsm3 ENSDARG00000004880 165 0.988 - 0.988 - - - - - - - acyl-CoA synthetase medium chain family member 3 [Source:ZFIN;Acc:ZDB-GENE-080220-22]
95. nusap1 ENSDARG00000002403 6953 0.987 - 0.987 - - - - - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
96. ANXA1 ANXA1 1103 0.987 - 0.987 - - - - - - -
97. plin2 ENSDARG00000042332, ENSDARG00000116454 399 0.987 - 0.987 - - - - - - - perilipin 2 [Source:ZFIN;Acc:ZDB-GENE-050913-12]
98. UBL4A UBL4A 1115 0.987 - 0.987 - - - - - - -
99. si:ch211-214j24.14 ENSDARG00000096037 536 0.987 - 0.987 - - - - - - - si:ch211-214j24.14 [Source:ZFIN;Acc:ZDB-GENE-110914-226]
100. pbk ENSDARG00000007221 1211 0.986 - 0.986 - - - - - - - PDZ binding kinase [Source:ZFIN;Acc:ZDB-GENE-030523-2]

There are 1089 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA