Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-238o14.8

Gene Name Gene ID Reads Annotation
si:dkey-238o14.8 si:dkey-238o14.8 32










Genes with expression patterns similar to si:dkey-238o14.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-238o14.8 si:dkey-238o14.8 32 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000
2. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 1.851 - 0.851 - - - 1.000 - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
3. KSR1 KSR1 8 1.851 - 0.851 - - - 1.000 - - -
4. BX324215.3 BX324215.3 12 1.796 0.796 - - - - 1.000 - - -
5. SLC39A8 ENSDARG00000056757 52 1.733 - 0.808 - - - 0.925 - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
6. si:dkey-3p4.8 ENSDARG00000114124 82 1.71 - 0.833 - 0.877 - - - - - si:dkey-3p4.8 [Source:ZFIN;Acc:ZDB-GENE-120215-16]
7. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.706 - 0.851 - 0.855 - - - - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
8. si:ch211-202h22.7 ENSDARG00000073912 18 1.681 0.724 - - 0.957 - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
9. LRCH4 ENSDARG00000068258 22 1.666 0.724 - - 0.942 - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
10. ephx2 ENSDARG00000040255 105 1.615 - - - - 0.767 0.848 - - - epoxide hydrolase 2, cytoplasmic [Source:ZFIN;Acc:ZDB-GENE-041212-70]
11. si:ch211-225b11.4 ENSDARG00000093563 42 1.601 - - - - - 0.868 - - 0.733 si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
12. CCDC138 CCDC138 73 1.594 - - - 0.726 - 0.868 - - -
13. si:dkey-103k4.5 si:dkey-103k4.5 11 1.576 - 0.851 - - - 0.725 - - -
14. si:dkeyp-104f11.6 ENSDARG00000089158 89 1.574 0.812 - - 0.762 - - - - - si:dkeyp-104f11.6 [Source:ZFIN;Acc:ZDB-GENE-130531-1]
15. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1.571 0.720 0.851 - - - - - - - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
16. RNF39 RNF39 52 1.565 - 0.725 - - 0.840 - - - -
17. si:dkey-253d23.8 ENSDARG00000094427 26 1.559 - 0.725 - - 0.834 - - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
18. GPR4 ENSDARG00000079479 92 1.558 0.749 - - - 0.809 - - - - G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-101202-1]
19. fancf ENSDARG00000019250 111 1.508 - - - 0.734 - - - - 0.774 FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
20. zgc:193682 zgc:193682 15 1.444 0.724 0.720 - - - - - - -
21. si:dkey-177p2.18 ENSDARG00000091633 91 1.442 - - - 0.740 - - - 0.702 - si:dkey-177p2.18 [Source:ZFIN;Acc:ZDB-GENE-130603-12]
22. AKR1C1 AKR1C1 32 1.426 0.724 0.702 - - - - - - -
23. insl5b ENSDARG00000069294 1 1 - - - - - 1.000 - - - insulin-like 5b [Source:ZFIN;Acc:ZDB-GENE-070122-5]
24. mybpc2a ENSDARG00000030157 11 1 - - - - - 1.000 - - - myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
25. cd8a ENSDARG00000044797 7 1 - - - - - 1.000 - - - CD8a molecule [Source:ZFIN;Acc:ZDB-GENE-060210-2]
26. adgra1a ENSDARG00000054177 19 1 - - - - - 1.000 - - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
27. si:ch211-271e10.1 ENSDARG00000095735 15 1 - - - - - 1.000 - - - si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
28. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - - 1.000 - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
29. zgc:174945 ENSDARG00000062057, ENSDARG00000112119 3 1 - - - - - 1.000 - - - zgc:174945 [Source:ZFIN;Acc:ZDB-GENE-080204-80]
30. tlx1 ENSDARG00000003965 67 1 - - - - - 1.000 - - - T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
31. CR388046.1_1 ENSDARG00000102930 1 1 - - - - - 1.000 - - -
32. grtp1b ENSDARG00000030269 24 1 - - - - - 1.000 - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
33. BX649314.1 BX649314.1 3 1 - - - - - 1.000 - - -
34. pla2g15 ENSDARG00000103271 4 1 - 1.000 - - - - - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
35. MSH4 ENSDARG00000075826 37 1 - - - - - 1.000 - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
36. rpap3 ENSDARG00000087962 22 1 - - - - - 1.000 - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
37. DPYSL2 DPYSL2 4 1 - - - - - 1.000 - - -
38. itga11b ENSDARG00000007950 17 1 - - - - - 1.000 - - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
39. chrna9 ENSDARG00000054680 4 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
40. adck4 7 1 - 1.000 - - - - - - - aarF domain containing kinase 4, transcript variant X2
41. DXO ENSDARG00000036852 16 1 - - - - - 1.000 - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
42. ENTPD5 ENTPD5 42 1 - - - - - 1.000 - - -
43. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1 - 1.000 - - - - - - - solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
44. CST7 CST7 22 1 - - - - - 1.000 - - -
45. BX511021.2 ENSDARG00000097646 5 1 - - - - - 1.000 - - -
46. CU468012.1 ENSDARG00000077794 3 1 - - - - - 1.000 - - -
47. si:dkey-46g23.2 ENSDARG00000115817 11 1 - - - - - 1.000 - - - si:dkey-46g23.2 [Source:ZFIN;Acc:ZDB-GENE-070705-476]
48. dis3 ENSDARG00000060559, ENSDARG00000110345 92 1 - - - - - 1.000 - - - DIS3 exosome endoribonuclease and 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-080213-3]
49. si:dkey-40j3.1 si:dkey-40j3.1 1 1 - - - - - 1.000 - - -
50. DYDC2 ENSDARG00000101848 2 1 - - - - - 1.000 - - - DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
51. rs1 rs1 70 1 - - - - - 1.000 - - -
52. BX248122.1 ENSDARG00000112449 1 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF57.1-like [Source:NCBI gene;Acc:103910472]
53. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 1 - - - - - 1.000 - - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
54. TGFBR3L TGFBR3L 16 1 - - - - - 1.000 - - -
55. RNF222 24 1 - - - - - 1.000 - - - ring finger protein 222
56. TRIM14_3 TRIM14_3 7 1 - - - - - 1.000 - - -
57. ttr ENSDARG00000037191 11 1 - - - - - 1.000 - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
58. akap1a ENSDARG00000089802 5 1 - - - - - 1.000 - - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
59. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1 - 1.000 - - - - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
60. bckdhb ENSDARG00000014676 17 1 - - - - - 1.000 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
61. ahr1b ENSDARG00000023537 44 1 - 1.000 - - - - - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
62. or111-3 ENSDARG00000086633 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
63. gtf3c2 ENSDARG00000004574 153 1 - - - - - 1.000 - - - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
64. BX936386.1 ENSDARG00000097166 5 1 - - - - - 1.000 - - -
65. fermt3b ENSDARG00000030938 17 1 - - - - - 1.000 - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
66. CU638695.1 CU638695.1 90 1 - - - - - 1.000 - - -
67. FAM150B FAM150B 29 1 - - - - - 1.000 - - -
68. polr3b ENSDARG00000062915, ENSDARG00000113895 144 1 - - - - - 1.000 - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-030131-2887]
69. mstna ENSDARG00000042947 1 1 - - - - - 1.000 - - - myostatin a [Source:ZFIN;Acc:ZDB-GENE-050208-735]
70. zgc:113389 zgc:113389 123 1 - - - - - 1.000 - - -
71. cdc14aa ENSDARG00000013858 18 1 - - - - - 1.000 - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
72. lama3 ENSDARG00000071462 1 1 - - - - - 1.000 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
73. si:dkeyp-68b7.5 ENSDARG00000079930 14 1 - - - - - 1.000 - - - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
74. si:dkey-43k4.4 si:dkey-43k4.4 4 1 - - - - - 1.000 - - -
75. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1 - - - - - 1.000 - - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
76. KCNA2 KCNA2 66 1 - - - - - 1.000 - - -
77. rhoh ENSDARG00000070121 1 1 - - - - - 1.000 - - - ras homolog family member H [Source:ZFIN;Acc:ZDB-GENE-060228-7]
78. si:ch211-261n9.2 si:ch211-261n9.2 4 1 - - - - - 1.000 - - -
79. fam136a ENSDARG00000098401 50 1 - - - - - 1.000 - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
80. si:dkey-15j16.3 ENSDARG00000042683 2 1 - - - - - 1.000 - - - si:dkey-15j16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4680]
81. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
82. zbtb47a ENSDARG00000057751 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 47a [Source:ZFIN;Acc:ZDB-GENE-081104-121]
83. TMC5 ENSDARG00000013252 22 1 - - - - - 1.000 - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
84. FASN ENSDARG00000087657 18 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
85. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 - - - - - 1.000 - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
86. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - - - - - 1.000 - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
87. zap70 ENSDARG00000015752 1 1 - - - - - 1.000 - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
88. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - 1.000 - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
89. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - - - - - 1.000 - - -
90. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - - - - - 1.000 - - -
91. mms22l ENSDARG00000074691 232 1 - - - - - 1.000 - - - MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]
92. EML4 7 1 - - - - - 1.000 - - - echinoderm microtubule associated protein like 4
93. XCR1 XCR1 9 1 - - - - - 1.000 - - -
94. snx33 ENSDARG00000014954 45 1 - - - - - 1.000 - - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
95. igf3 ENSDARG00000058058 19 1 - - - - - 1.000 - - - insulin-like growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-080611-1]
96. CU855880.2 CU855880.2 3 1 - - - - - 1.000 - - -
97. cbln10 ENSDARG00000023157 17 1 - 1.000 - - - - - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
98. SNORD65 SNORD65 35 1 - - - - - 1.000 - - -
99. NUGGC_3 NUGGC_3 10 1 - - - - - 1.000 - - -
100. cyp2x7 ENSDARG00000044002, ENSDARG00000109785 671 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily X, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-110114-2]

There are 925 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA