Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-238m4.1

Gene Name Gene ID Reads Annotation
si:dkey-238m4.1 si:dkey-238m4.1 71










Genes with expression patterns similar to si:dkey-238m4.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-238m4.1 si:dkey-238m4.1 71 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. snai3 ENSDARG00000031243 31 2.293 0.829 0.725 - - - 0.739 - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
3. mmrn2a ENSDARG00000076135 37 1.848 0.903 0.945 - - - - - - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
4. rtn4rl2b ENSDARG00000037495 11 1.739 - - - - - 0.739 1.000 - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
5. LINS LINS 42 1.725 - 0.725 - - - - 1.000 - -
6. lrp2b ENSDARG00000007906 23 1.718 0.903 - - - - - 0.815 - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
7. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1.714 0.903 - - - - - 0.811 - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
8. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1.714 0.903 - - - - - 0.811 - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
9. mir15a-1 36 1.714 0.903 - - - - - 0.811 - - microRNA 15a-1
10. sst2 ENSDARG00000014190 617 1.712 - - - - - 1.000 0.712 - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
11. C25H11orf74 C25H11orf74 161 1.674 0.903 0.771 - - - - - - -
12. cpa2 ENSDARG00000010146 28 1.653 0.903 - - - - - 0.750 - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
13. ldhbb ENSDARG00000071076 31 1.638 - 0.899 - - - 0.739 - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
14. si:dkey-23a23.3 ENSDARG00000088214 86 1.633 - 0.765 - - - - 0.868 - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
15. ECT2L 39 1.608 0.903 - - - - - 0.705 - - epithelial cell transforming 2 like, transcript variant X4
16. fzd9a ENSDARG00000035185 58 1.605 0.904 0.701 - - - - - - - frizzled class receptor 9a [Source:ZFIN;Acc:ZDB-GENE-060531-77]
17. WWC1 ENSDARG00000076041 26 1.604 0.903 - - - - - - - 0.701 WW and C2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091118-8]
18. si:ch73-256j6.5 ENSDARG00000092732 65 1.597 - 0.837 0.760 - - - - - - si:ch73-256j6.5 [Source:ZFIN;Acc:ZDB-GENE-070705-225]
19. si:dkey-222o15.3 si:dkey-222o15.3 3 1.588 - - - - - 0.777 0.811 - -
20. neto1l ENSDARG00000071596 57 1.585 0.801 0.784 - - - - - - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
21. mir430c-2 2 1.553 - - - - - 0.742 0.811 - - microRNA 430c-2
22. zmat4b ENSDARG00000061419 7 1.526 - 0.784 - - - - - - 0.742 zinc finger, matrin-type 4b [Source:ZFIN;Acc:ZDB-GENE-091118-68]
23. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1.507 - - - - - 0.739 - - 0.768 Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
24. sclt1 ENSDARG00000057248 339 1.492 0.788 - - - - 0.704 - - - sodium channel and clathrin linker 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3278]
25. svopb ENSDARG00000014951 1 1.464 - 0.725 - - - 0.739 - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
26. ENSDARG00000096199 ENSDARG00000096199 15 1.464 - 0.725 - - - 0.739 - - -
27. CABZ01086354.1 CABZ01086354.1 22 1.464 - 0.725 - - - 0.739 - - -
28. slc25a27 ENSDARG00000042873 297 1.417 - - - - 0.707 0.710 - - - solute carrier family 25, member 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1290]
29. ankrd37 ENSDARG00000056376 131 1 - - - - - 1.000 - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
30. zgc:153738 ENSDARG00000069230 84 1 - - - - - - 1.000 - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
31. CU855821.2 CU855821.2 21 1 - - - - - - 1.000 - -
32. TMC5 ENSDARG00000013252 22 1 - - - - - - 1.000 - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
33. psma6l ENSDARG00000043899 3 1 - - - - - - 1.000 - - proteasome subunit alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-010502-2]
34. U1_33 U1_33 76 1 - - - - - - 1.000 - -
35. si:ch211-152p23.2 ENSDARG00000094519 4 1 - - - - - - 1.000 - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
36. ano2 ENSDARG00000101363 50 1 - - - - - - 1.000 - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
37. CCDC134_1 CCDC134_1 200 1 - - - - - - 1.000 - -
38. wu:fb39e10 wu:fb39e10 23 1 - - - - - 1.000 - - -
39. CT027705.3 CT027705.3 9 1 - - - - - 1.000 - - -
40. HIST1H2BA_1 ENSDARG00000116654 37 1 - - - - - 1.000 - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
41. pcsk9 ENSDARG00000074185 8 1 - - - - - 1.000 - - - proprotein convertase subtilisin/kexin type 9 [Source:ZFIN;Acc:ZDB-GENE-060927-1]
42. si:ch211-229i14.2 ENSDARG00000086048 19 1 1.000 - - - - - - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
43. atp2b1b ENSDARG00000007788 56 1 - - - - - 1.000 - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
44. si:ch211-197h24.7 si:ch211-197h24.7 25 1 - - - - - - 1.000 - -
45. CU856173.1 CU856173.1 26 1 - - - - - - 1.000 - -
46. SPAG17 SPAG17 31 1 - - - - - 1.000 - - -
47. slc6a19a slc6a19a 41 1 - - - - - - 1.000 - -
48. si:ch211-255g12.9 si:ch211-255g12.9 78 0.991 0.991 - - - - - - - -
49. dennd2c ENSDARG00000073738 161 0.991 0.991 - - - - - - - - DENN/MADD domain containing 2C [Source:ZFIN;Acc:ZDB-GENE-081105-71]
50. zgc:158446 36 0.979 - - - - - - 0.979 - - zgc:158446
51. edn1 ENSDARG00000036912 74 0.966 - - - - - - 0.966 - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
52. si:ch211-207m11.3 si:ch211-207m11.3 401 0.964 0.964 - - - - - - - -
53. smyhc2 ENSDARG00000099115, ENSDARG00000103969, ENSDARG00000111606 153 0.961 - - - - - - 0.961 - - slow myosin heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-070822-12]
54. zgc:154125 ENSDARG00000071463 7 0.961 - - - - - - 0.961 - - zgc:154125 [Source:ZFIN;Acc:ZDB-GENE-061013-717]
55. dytn ENSDARG00000071025 38 0.961 - - - - - - 0.961 - - dystrotelin [Source:ZFIN;Acc:ZDB-GENE-070124-2]
56. ITGAL ITGAL 277 0.953 - 0.953 - - - - - - -
57. BX004994.2 BX004994.2 17 0.953 - - - - - - 0.953 - -
58. CR376848.1 ENSDARG00000115549 149 0.951 - - - - - 0.951 - - - neutral cholesterol ester hydrolase 1-like [Source:NCBI gene;Acc:797436]
59. si:ch1073-181h11.4 ENSDARG00000098347 86 0.951 - - - - - 0.951 - - - si:ch1073-181h11.4 [Source:ZFIN;Acc:ZDB-GENE-091204-426]
60. CR383676.3_1 CR383676.3_1 177 0.946 0.946 - - - - - - - -
61. 5S_rRNA_2 5S_rRNA_2 89 0.946 0.946 - - - - - - - -
62. CR790363.1 ENSDARG00000097364 145 0.946 0.946 - - - - - - - -
63. CABZ01071530.2 CABZ01071530.2 47 0.946 0.946 - - - - - - - -
64. zgc:55621 ENSDARG00000010782 3 0.946 0.946 - - - - - - - - zgc:55621 [Source:ZFIN;Acc:ZDB-GENE-040426-762]
65. si:ch211-10m5.3 si:ch211-10m5.3 10 0.946 0.946 - - - - - - - -
66. si:dkey-239i20.4 ENSDARG00000043514, ENSDARG00000114327 178 0.946 0.946 - - - - - - - - si:dkey-239i20.4 [Source:ZFIN;Acc:ZDB-GENE-030131-2644]
67. si:ch73-167f18.4 si:ch73-167f18.4 9 0.946 0.946 - - - - - - - -
68. si:dkey-25i10.5 si:dkey-25i10.5 18 0.946 0.946 - - - - - - - -
69. SLC4A5 9 0.946 0.946 - - - - - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
70. mir133a-1 77 0.946 0.946 - - - - - - - - microRNA 133a-1
71. zgc:113294 ENSDARG00000032285 132 0.945 - 0.945 - - - - - - - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
72. ADAM12 ENSDARG00000116062 35 0.945 - - - - - - 0.945 - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
73. prkar1b ENSDARG00000103800, ENSDARG00000115444 386 0.942 - 0.942 - - - - - - - protein kinase, cAMP-dependent, regulatory, type I, beta [Source:ZFIN;Acc:ZDB-GENE-060929-580]
74. GABRG3 84 0.942 - 0.942 - - - - - - - gamma-aminobutyric acid type A receptor gamma3 subunit
75. TULP2 TULP2 38 0.942 - - - - - - 0.942 - -
76. BAIAP2L2 BAIAP2L2 31 0.942 - - - - - - 0.942 - -
77. dbpb ENSDARG00000057652, ENSDARG00000116703 71 0.942 - - - - - - 0.942 - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
78. poln ENSDARG00000103961, ENSDARG00000113911 57 0.929 - - - - - 0.929 - - - polymerase (DNA directed) nu [Source:ZFIN;Acc:ZDB-GENE-100917-1]
79. si:ch211-163l21.8 ENSDARG00000042899 724 0.923 - - - - - - 0.923 - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
80. zgc:171489 ENSDARG00000052300 119 0.922 0.922 - - - - - - - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
81. rorab ENSDARG00000001910, ENSDARG00000109324, ENSDARG00000113275 518 0.921 - 0.921 - - - - - - - RAR-related orphan receptor A, paralog b [Source:ZFIN;Acc:ZDB-GENE-040426-855]
82. si:dkey-153k10.7 3 0.919 - - - - - 0.919 - - - si:dkey-153k10.7, transcript variant X1
83. lipt1 ENSDARG00000025233 385 0.919 - 0.919 - - - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
84. si:ch211-67e16.2 41 0.919 - - - - - 0.919 - - - si:ch211-67e16.2, transcript variant X2
85. mb ENSDARG00000031952 351 0.919 - - - - - - 0.919 - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
86. si:ch211-139k8.2 143 0.914 - - - - - - 0.914 - - si:ch211-139k8.2, transcript variant X4
87. rrnad1 ENSDARG00000089033 69 0.914 - - - - - 0.914 - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
88. azin1a ENSDARG00000052789 387 0.913 0.913 - - - - - - - - antizyme inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050417-20]
89. lyve1b ENSDARG00000062483 14 0.908 - 0.908 - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
90. zgc:195633_1 142 0.905 - 0.905 - - - - - - - zgc:195633
91. WDSUB1 ENSDARG00000090418 357 0.904 - 0.904 - - - - - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061110-97]
92. P2RY11 ENSDARG00000014929 75 0.903 0.903 - - - - - - - - purinergic receptor P2Y11 [Source:ZFIN;Acc:ZDB-GENE-111221-4]
93. PDE1C PDE1C 1 0.903 0.903 - - - - - - - -
94. got1 ENSDARG00000039093 1 0.903 0.903 - - - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
95. lmx1a ENSDARG00000020354 111 0.903 0.903 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
96. wnt5a ENSDARG00000104973 21 0.903 0.903 - - - - - - - - wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
97. GRIK3 ENSDARG00000077715 178 0.903 0.903 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
98. sycp2 ENSDARG00000088950 3 0.903 0.903 - - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
99. CR382372.1 ENSDARG00000096684 2 0.903 0.903 - - - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
100. si:dkey-46g23.5 ENSDARG00000008835 7 0.903 0.903 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]

There are 930 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA