Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-238f9.1

Gene Name Gene ID Reads Annotation
si:dkey-238f9.1 ENSDARG00000079446 51 si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]










Genes with expression patterns similar to si:dkey-238f9.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-238f9.1 ENSDARG00000079446 51 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
2. CABZ01063077.1 CABZ01063077.1 22 3.345 0.824 - - - 0.830 0.705 0.986 - -
3. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 3.093 0.764 - - - - 0.871 0.746 0.712 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
4. phactr3a ENSDARG00000058243 150 2.726 1.000 - - - - 0.908 0.818 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
5. GRM8_1 GRM8_1 85 2.639 0.871 - - - - 0.910 0.858 - -
6. si:dkey-202n8.1 si:dkey-202n8.1 35 2.634 0.835 0.856 - - - - 0.943 - -
7. p2rx3b ENSDARG00000029718 105 2.601 0.808 - - - - 0.958 0.835 - - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
8. si:ch73-155e10.1 si:ch73-155e10.1 13 2.558 0.871 0.922 - - - 0.765 - - -
9. stmn4l ENSDARG00000043932 654 2.396 0.724 - - - - 0.782 0.890 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
10. gria4a ENSDARG00000037496 88 2.375 0.786 - - - - 0.761 0.828 - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
11. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.348 0.784 - - - - 0.718 0.846 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
12. nlgn3b ENSDARG00000062376 171 2.315 0.707 - - - - 0.757 0.851 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
13. cadpsb ENSDARG00000070567 458 2.234 0.786 - - - - 0.743 0.705 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
14. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 2 1.000 1.000 - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
15. pcgf5b ENSDARG00000052388 163 2 1.000 1.000 - - - - - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
16. mlphb ENSDARG00000062481 14 1.958 - 1.000 - - - 0.958 - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
17. neto1l ENSDARG00000071596 57 1.91 - - - - - 0.962 0.948 - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
18. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.9 - - - - - 0.914 0.986 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
19. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1.871 0.871 1.000 - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
20. cyp2aa2 ENSDARG00000104811 77 1.871 0.871 1.000 - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
21. NELL2A ENSDARG00000090690 840 1.857 - 1.000 - - - - 0.857 - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
22. mkks ENSDARG00000016139 70 1.844 1.000 - - - - - 0.844 - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
23. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1.844 - 1.000 - - - - 0.844 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
24. SKOR2 SKOR2 1041 1.839 - - - - - 0.926 0.913 - -
25. c6ast1 ENSDARG00000069216 8 1.835 0.871 - - - 0.964 - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
26. gabrb2 ENSDARG00000079586 33 1.815 0.871 - - - - 0.944 - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
27. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.807 0.871 - - - - - 0.936 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
28. plekho1a ENSDARG00000061191 98 1.803 - - - - - 0.862 0.941 - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
29. SNORA7 SNORA7 100 1.8 - 1.000 - - - 0.800 - - -
30. ntrk2a ENSDARG00000059897 185 1.794 - - - - - 0.914 0.880 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
31. bai3 bai3 92 1.791 - - - - - 0.797 0.994 - -
32. NRG3 NRG3 22 1.789 - - - - - 0.945 0.844 - -
33. lhfpl4a ENSDARG00000111810 206 1.785 0.829 - - - - - 0.956 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
34. rpz3 ENSDARG00000069728 11 1.783 - 0.840 - - - - 0.943 - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
35. gpr173 ENSDARG00000042922 238 1.774 - - - - - 0.930 0.844 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
36. FGFBP3 FGFBP3 993 1.772 0.871 - - - - - 0.901 - -
37. si:ch211-39a7.1 ENSDARG00000037427 31 1.765 - - - - - 0.765 1.000 - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
38. dre-mir-196c dre-mir-196c 2 1.765 - 1.000 - - - 0.765 - - -
39. CABZ01048675.1 CABZ01048675.1 4 1.765 - 1.000 - - - 0.765 - - -
40. slc8a4a ENSDARG00000055154 90 1.765 0.819 - - - - - 0.946 - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
41. si:ch211-120c15.3 ENSDARG00000101807 19 1.764 0.920 - - - - - 0.844 - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
42. b3galtlb b3galtlb 27 1.758 - 1.000 - - - 0.758 - - -
43. dscamb ENSDARG00000028118 82 1.757 - 0.856 - - - - 0.901 - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
44. prdm14 ENSDARG00000045371 106 1.753 - - - - - 0.909 0.844 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
45. rnf165a ENSDARG00000077906 133 1.749 0.749 - - - - - 1.000 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
46. rgs11 ENSDARG00000037646 24 1.739 0.871 - - - - 0.868 - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
47. gphnb ENSDARG00000100851 118 1.735 - - - - - 0.852 0.883 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
48. C24H16orf11 C24H16orf11 32 1.729 - 0.964 - - - 0.765 - - -
49. clstn3 ENSDARG00000073883 590 1.726 - - - - - 0.821 0.905 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
50. disp2 ENSDARG00000042846 53 1.724 - 1.000 - - - 0.724 - - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
51. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.718 - - - - - 0.900 0.818 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
52. PRKAR2B ENSDARG00000036446 812 1.717 - - - - - 0.770 0.947 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
53. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.717 - - - - - 0.835 0.882 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
54. pcdh18a ENSDARG00000089805 1096 1.716 0.820 - - - - - 0.896 - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
55. tecrl2 tecrl2 11 1.715 0.871 - - - - - 0.844 - -
56. GPR22_1 GPR22_1 28 1.715 0.871 - - - - - 0.844 - -
57. ftr14l ENSDARG00000078254 2 1.715 0.871 - - - - - 0.844 - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
58. fez1 ENSDARG00000023174 701 1.715 - - - - - - 0.979 0.736 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
59. ptchd4 ENSDARG00000008249 17 1.715 0.871 - - - - - 0.844 - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
60. si:ch211-132b12.7 ENSDARG00000068374 30 1.715 0.871 - - - - - 0.844 - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
61. si:dkey-122c11.4 si:dkey-122c11.4 13 1.715 0.871 - - - - - 0.844 - -
62. CR936540.2 CR936540.2 4 1.715 0.871 - - - - - 0.844 - -
63. scd ENSDARG00000033662 146 1.715 0.871 - - - - - 0.844 - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
64. si:ch211-216b21.2 ENSDARG00000060253 54 1.714 - - 0.896 - - - 0.818 - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
65. nefla ENSDARG00000057568 62 1.713 - - - - - 0.833 0.880 - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
66. SPTBN4_1 ENSDARG00000092624 473 1.712 - - - - - 0.781 0.931 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
67. cdk5r2b ENSDARG00000078671 20 1.708 - - - - - 0.765 0.943 - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
68. si:ch211-110p13.9 ENSDARG00000093821 82 1.707 0.707 1.000 - - - - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
69. si:dkey-72l14.7 si:dkey-72l14.7 3 1.701 0.871 - - - 0.830 - - - -
70. ADAMTS15_1 ADAMTS15_1 11 1.701 0.871 - - - 0.830 - - - -
71. prok1 ENSDARG00000073948, ENSDARG00000114411 26 1.701 - - - - - 0.866 0.835 - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
72. CABZ01067743.1 CABZ01067743.1 48 1.7 - 0.856 - - - - 0.844 - -
73. slc8a2b ENSDARG00000100592 598 1.699 - - - - - 0.859 0.840 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
74. cradd ENSDARG00000028192 153 1.697 0.871 - - - - - 0.826 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
75. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.696 - - - - - 0.811 0.885 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
76. stxbp5a ENSDARG00000002656 318 1.695 0.753 - - - - - 0.942 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
77. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 1.685 - - - - - 0.837 0.848 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
78. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.685 0.894 - - - - 0.791 - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
79. si:dkey-211f1.2 si:dkey-211f1.2 11 1.684 - 0.840 - - - - 0.844 - -
80. amigo3 ENSDARG00000074469 39 1.682 - - - - - 0.966 0.716 - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
81. atp6v0a1b ENSDARG00000015174 1052 1.681 - - - - - 0.789 0.892 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
82. SNORA5 SNORA5 72 1.678 - 0.851 - - - 0.827 - - -
83. rbfox3 rbfox3 1443 1.677 - - - - - 0.780 0.897 - -
84. CU694952.2 CU694952.2 3 1.674 - - - - 0.830 - 0.844 - -
85. C9H2orf69 C9H2orf69 148 1.672 - 0.836 - - - - 0.836 - -
86. TMEM151A ENSDARG00000077986 78 1.669 - - - - - 0.704 0.965 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
87. pax6a ENSDARG00000103379 3061 1.667 - - - - - 0.768 0.899 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
88. si:ch211-152f6.6 si:ch211-152f6.6 278 1.667 - - - - - 0.726 0.941 - -
89. syt4 ENSDARG00000036505 421 1.664 - - - - - 0.811 0.853 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
90. rcor2 ENSDARG00000008278 1678 1.663 - - - - - - 0.912 0.751 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
91. NPTXR NPTXR 241 1.662 - - - - - 0.879 0.783 - -
92. kcnd1 ENSDARG00000074746 153 1.66 - - - - - 0.718 0.942 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
93. gsx1 ENSDARG00000035735 1243 1.659 - - - - - 0.794 0.865 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
94. CR788297.1 CR788297.1 356 1.658 - - - - - 0.788 0.870 - -
95. pax6b ENSDARG00000045936 349 1.652 - - - - - 0.796 0.856 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
96. si:ch73-287n15.1 si:ch73-287n15.1 20 1.652 - - - - - 0.834 0.818 - -
97. tmem178b ENSDARG00000006747 173 1.651 - - - - - 0.796 0.855 - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
98. scrt2 ENSDARG00000056175 4331 1.65 0.715 - - - - - 0.935 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
99. zgc:193682 zgc:193682 15 1.649 - 0.856 - - 0.793 - - - -
100. lhx1a ENSDARG00000014018 958 1.649 - - - - - 0.885 0.764 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]

There are 1797 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA