Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-238c7.16

Gene Name Gene ID Reads Annotation
si:dkey-238c7.16 ENSDARG00000069537, ENSDARG00000111432 5140 si:dkey-238c7.16 [Source:ZFIN;Acc:ZDB-GENE-030131-4169]










Genes with expression patterns similar to si:dkey-238c7.16

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-238c7.16 ENSDARG00000069537, ENSDARG00000111432 5140 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-238c7.16 [Source:ZFIN;Acc:ZDB-GENE-030131-4169]
2. fh ENSDARG00000075132 1340 2.265 - 0.715 - - - - 0.713 - 0.837 fumarate hydratase [Source:ZFIN;Acc:ZDB-GENE-010724-6]
3. slc25a12 ENSDARG00000102362 2773 2.24 - 0.790 - - - - 0.729 - 0.721 solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
4. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.705 - 0.793 - - - - 0.912 - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
5. col27a1a 1747 1.627 - 0.839 - - - - - - 0.788 collagen, type XXVII, alpha 1a
6. stxbp3 ENSDARG00000008142 2604 1.621 - - - - - - 0.744 - 0.877 syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
7. thbs4b ENSDARG00000020072 2500 1.62 - - - - - - 0.789 - 0.831 thrombospondin 4b [Source:ZFIN;Acc:ZDB-GENE-020708-4]
8. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.614 - 0.724 - - - - - - 0.890 ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
9. ppp2r1a ppp2r1a 11291 1.609 - 0.840 - - - - 0.769 - -
10. polr3a ENSDARG00000102569 1072 1.604 - - - - - - 0.735 - 0.869 polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
11. abcg2c ENSDARG00000058574 1261 1.594 - 0.763 - - - - - - 0.831 ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
12. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 1.585 - 0.734 - - - - - - 0.851 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
13. tp53i11b ENSDARG00000006025 569 1.585 - - - - 0.700 - - - 0.885 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
14. esd ENSDARG00000019496 3192 1.584 - 0.717 - - - - - - 0.867 esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
15. zgc:153675 ENSDARG00000071555 3769 1.579 - - - - - - 0.781 - 0.798 zgc:153675 [Source:ZFIN;Acc:ZDB-GENE-061013-567]
16. lepre1 lepre1 5346 1.567 - 0.859 - 0.708 - - - - -
17. edf1 ENSDARG00000009950 10518 1.566 - 0.754 - - - 0.812 - - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
18. eif3m ENSDARG00000013931 8117 1.565 - 0.756 - - - 0.809 - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
19. colgalt1 ENSDARG00000073974 1473 1.56 - - - - - - 0.711 - 0.849 collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
20. pa2g4b ENSDARG00000070657 7999 1.558 - 0.825 - - - - 0.733 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
21. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.557 - - - - - - 0.735 - 0.822 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
22. akt1s1 ENSDARG00000074667 3795 1.555 - 0.740 - - - - 0.815 - - AKT1 substrate 1 (proline-rich) [Source:ZFIN;Acc:ZDB-GENE-030131-482]
23. ier3ip1 ENSDARG00000039601 5529 1.552 - - 0.728 - - - 0.824 - - immediate early response 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050506-106]
24. xpnpep1 ENSDARG00000029011 1723 1.548 - - - - - - 0.711 - 0.837 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
25. ccdc47 ENSDARG00000054362 5970 1.546 - 0.737 - - - - 0.809 - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
26. HYAL2 HYAL2 936 1.546 - 0.796 - - - - 0.750 - -
27. mrps15 ENSDARG00000109289 3258 1.545 - 0.823 - - - - 0.722 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
28. hm13 ENSDARG00000037846 5019 1.545 - 0.793 - - - - 0.752 - - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
29. fam53b ENSDARG00000016156 2143 1.543 - - - - - - 0.728 - 0.815 family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
30. arfgap2 ENSDARG00000067601 6801 1.528 - 0.703 - - - 0.825 - - - ADP-ribosylation factor GTPase activating protein 2 [Source:ZFIN;Acc:ZDB-GENE-051120-177]
31. psmc1a ENSDARG00000030537 2799 1.527 - 0.787 - - - - 0.740 - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
32. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.523 - 0.779 - - - - 0.744 - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
33. isoc2 ENSDARG00000013371 1378 1.522 - 0.709 - - - - - - 0.813 isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
34. dlg1l ENSDARG00000102216 1960 1.517 - - - - - - 0.765 - 0.752 discs, large (Drosophila) homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-050222-3]
35. eci1 ENSDARG00000018002 2141 1.514 - 0.735 - - - - 0.779 - - enoyl-CoA delta isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6033]
36. slc38a5b ENSDARG00000014587 8461 1.513 - 0.733 - - - - 0.780 - - solute carrier family 38, member 5b [Source:ZFIN;Acc:ZDB-GENE-040718-395]
37. TCEB3 2429 1.499 - 0.787 - - - 0.712 - - - transcription elongation factor B (SIII), polypeptide 3
38. ppig ENSDARG00000044431 3427 1.497 - 0.709 - - - - 0.788 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
39. si:ch211-286b5.5 ENSDARG00000096661 3136 1.497 - - - - - - 0.707 - 0.790 si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
40. ube2g1b ENSDARG00000069527 5376 1.494 - 0.703 - - - - 0.791 - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
41. snx27a ENSDARG00000033804 2249 1.492 - 0.732 - - - - - - 0.760 sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
42. timm9 ENSDARG00000043865 2456 1.49 - 0.739 - - - - 0.751 - - translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
43. snx1a ENSDARG00000071031 3975 1.489 - - - - - - 0.742 - 0.747 sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
44. rrbp1a ENSDARG00000013763 4723 1.481 - 0.738 - - - - 0.743 - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
45. CASKIN2_1 CASKIN2_1 2299 1.48 - 0.723 - - - - - - 0.757
46. gnaia ENSDARG00000044760, ENSDARG00000109225 2062 1.477 - 0.730 - - - - - - 0.747 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-2229]
47. GABARAP GABARAP 8341 1.475 - 0.761 - - - 0.714 - - -
48. cdk2ap2 ENSDARG00000103145 8024 1.471 - - - - - 0.758 0.713 - - cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
49. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 1.47 - 0.762 - - - 0.708 - - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
50. ITCH ITCH 1226 1.469 - 0.753 - - - - 0.716 - -
51. ndufaf5 ENSDARG00000061629 421 1.467 - 0.710 - - - - 0.757 - - NADH:ubiquinone oxidoreductase complex assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-070410-110]
52. arvcfb ENSDARG00000061688 2388 1.461 - 0.736 - - - - - - 0.725 ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
53. si:ch1073-325m22.2 ENSDARG00000095921 8534 1.459 - 0.746 - - - 0.713 - - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
54. phf5a ENSDARG00000045155, ENSDARG00000114593 1365 1.458 - 0.703 - - - - - - 0.755 PHD finger protein 5A [Source:ZFIN;Acc:ZDB-GENE-021219-3]
55. trim71 ENSDARG00000075593 2750 1.456 - 0.702 - - - - - - 0.754 tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
56. NEDD4 NEDD4 2040 1.453 - 0.723 - - - - 0.730 - -
57. mrps10 ENSDARG00000045913 1453 1.445 - 0.707 - - - - 0.738 - - mitochondrial ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040914-39]
58. fgfr1a ENSDARG00000011027 2705 1.444 - - - - - 0.711 0.733 - - fibroblast growth factor receptor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-255]
59. selt1a 9746 1.444 - - - - - 0.703 0.741 - - selenoprotein T, 1a
60. lats2 ENSDARG00000078864, ENSDARG00000115103 2063 1.437 - 0.736 - - - 0.701 - - - large tumor suppressor kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050119-6]
61. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 1.436 - 0.729 - - - - 0.707 - - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
62. src ENSDARG00000008107 3643 1.431 - 0.714 - - - - - - 0.717 v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
63. bzw1b ENSDARG00000099148 2972 1.43 - 0.708 0.722 - - - - - - basic leucine zipper and W2 domains 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2881]
64. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.43 - - - - - - 0.720 - 0.710 heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
65. mif ENSDARG00000071336 1328 1.424 - 0.705 - - - - 0.719 - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
66. efna1a ENSDARG00000030326 1692 1.423 - 0.711 - - - - 0.712 - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
67. fam3c ENSDARG00000056152 3833 0.945 - - - - - - - - 0.945 family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
68. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 0.937 - - - - - - - - 0.937 zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
69. cyr61 ENSDARG00000023062 1213 0.933 - - - - - - - - 0.933 cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
70. CU633910.1 CU633910.1 828 0.93 - - - - - - - - 0.930
71. yif1a ENSDARG00000019636 2215 0.929 - - - - - - - - 0.929 Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
72. tmem59 ENSDARG00000019033 2692 0.926 - - - - - - - - 0.926 transmembrane protein 59 [Source:ZFIN;Acc:ZDB-GENE-070912-397]
73. adnp2a ENSDARG00000060937 562 0.924 - - - - - - - - 0.924 ADNP homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040914-55]
74. si:ch211-226m16.2 ENSDARG00000036785 2163 0.924 - - - - - - - - 0.924 si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
75. CABZ01039859.1 ENSDARG00000076361 540 0.923 - - - - - - - - 0.923 beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
76. tmem119b ENSDARG00000068036, ENSDARG00000113511 1119 0.919 - - - - - - - - 0.919 transmembrane protein 119b [Source:ZFIN;Acc:ZDB-GENE-070410-49]
77. sult6b1 ENSDARG00000086826 2070 0.912 - - - - - - - - 0.912 sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
78. BX004880.1 BX004880.1 638 0.911 - - - - - - - - 0.911
79. timp2b ENSDARG00000075261 867 0.911 - - - - - - - - 0.911 TIMP metallopeptidase inhibitor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2655]
80. cdx4 ENSDARG00000036292 1225 0.91 - - - - - - - - 0.910 caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
81. ascc1 ENSDARG00000077760 618 0.907 - - - - - - - - 0.907 activating signal cointegrator 1 complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-80]
82. PAQR4 PAQR4 2150 0.907 - - - - - - - - 0.907
83. hoxb13a ENSDARG00000056015 174 0.906 - - - - - - - - 0.906 homeobox B13a [Source:ZFIN;Acc:ZDB-GENE-050812-1]
84. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 0.906 - - - - - - - - 0.906 laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
85. ccnc ENSDARG00000009607 1240 0.905 - - - - - - - - 0.905 cyclin C [Source:ZFIN;Acc:ZDB-GENE-030131-7369]
86. si:ch73-138e16.8 175 0.903 - - - - - - - - 0.903 si:ch73-138e16.8
87. chid1 ENSDARG00000069673 675 0.902 - - - - - - - - 0.902 chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
88. mmp2 ENSDARG00000017676 2347 0.902 - - - - - - - - 0.902 matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
89. bhlhe41 ENSDARG00000041691, ENSDARG00000112123, ENSDARG00000114358 302 0.902 - - - - - - - - 0.902 basic helix-loop-helix family, member e41 [Source:ZFIN;Acc:ZDB-GENE-050419-146]
90. FP236810.2 ENSDARG00000113218 140 0.9 - - - - - - - - 0.900 UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
91. wu:fb55g09 6015 0.9 - - - - - 0.900 - - - wu:fb55g09
92. WDR81 ENSDARG00000079702 822 0.897 - - - - - - - - 0.897 WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
93. CLINT1 CLINT1 558 0.897 - - - - - - - - 0.897
94. CABZ01032467.1 CABZ01032467.1 400 0.897 - - - - - - - - 0.897
95. zgc:113184 ENSDARG00000098181 500 0.896 - - - - - - - - 0.896 zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]
96. tuba1b ENSDARG00000045367 8485 0.895 - 0.895 - - - - - - - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
97. grhl3 ENSDARG00000078552 897 0.895 - - - - - - - - 0.895 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
98. nrg1 ENSDARG00000104314 1081 0.893 - - - - - - - - 0.893 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
99. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 0.893 - - - - - - - - 0.893 dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
100. glsb ENSDARG00000040705 1439 0.892 - - - - - - - - 0.892 glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]

There are 1148 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA