Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-238c7.13

Gene Name Gene ID Reads Annotation
si:dkey-238c7.13 si:dkey-238c7.13 57










Genes with expression patterns similar to si:dkey-238c7.13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-238c7.13 si:dkey-238c7.13 57 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. SLC22A3 SLC22A3 173 1.71 0.845 - - - - 0.865 - - -
3. si:dkey-153n9.5 si:dkey-153n9.5 20 1.672 - - - - 0.848 0.824 - - -
4. zgc:64085 zgc:64085 955 1.642 0.789 - - - - 0.853 - - -
5. slc5a12 ENSDARG00000005004 15 1.589 - - - 0.838 - - 0.751 - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
6. BX004816.2 ENSDARG00000087012 3 1.561 - - - - 0.737 0.824 - - -
7. ZNF648 ENSDARG00000104823 194 1.561 - - - - - 0.810 0.751 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
8. si:dkey-263l8.2 si:dkey-263l8.2 3 1.561 - - - - 0.737 0.824 - - -
9. cfhl1 ENSDARG00000105212, ENSDARG00000111582 35 1.558 - - 0.734 - - 0.824 - - - complement factor H like 1 [Source:ZFIN;Acc:ZDB-GENE-050208-342]
10. SLC28A2 SLC28A2 21 1.542 - - - 0.791 - - 0.751 - -
11. JAG2 JAG2 427 1.5 0.780 - - - - 0.720 - - -
12. btr29 ENSDARG00000099138 5 1.488 - - - - 0.737 - 0.751 - - bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
13. slc6a19b ENSDARG00000056719 140 1.488 - - - - 0.737 - 0.751 - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
14. cx28.9 ENSDARG00000041797 12 1.488 - - - - 0.737 - 0.751 - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
15. CT025934.2 CT025934.2 22 1.488 - - - - 0.737 - 0.751 - -
16. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1.478 - - - - - 0.727 0.751 - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
17. fmodb ENSDARG00000010294 1735 1.477 0.748 - - - - 0.729 - - - fibromodulin b [Source:ZFIN;Acc:ZDB-GENE-080327-28]
18. ttyh2l ENSDARG00000010727 204 1.474 - - - - - 0.763 0.711 - - tweety homolog 2, like [Source:ZFIN;Acc:ZDB-GENE-040426-2394]
19. slc9a3.1 ENSDARG00000058498 46 1.466 - - - - - - 0.756 0.710 - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
20. b3gnt3.4 ENSDARG00000058100 117 1.448 - - - - - 0.703 0.745 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]
21. AIFM3 ENSDARG00000062780 358 1.444 0.735 - - - - 0.709 - - - apoptosis-inducing factor, mitochondrion-associated, 3 [Source:ZFIN;Acc:ZDB-GENE-140619-2]
22. RCSD1 RCSD1 144 1.413 - - - - 0.708 - 0.705 - -
23. piwil1 ENSDARG00000041699 21 1 - - - - - - - - 1.000 piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
24. TMEM120A ENSDARG00000030914 266 0.987 - - - - - 0.987 - - - transmembrane protein 120A [Source:ZFIN;Acc:ZDB-GENE-070424-21]
25. rassf10a 417 0.936 - - - - - - 0.936 - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
26. acy1 ENSDARG00000038475, ENSDARG00000111129 576 0.928 - - - - - 0.928 - - - aminoacylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-755]
27. zgc:194887 ENSDARG00000098586 437 0.927 - - - - - 0.927 - - - zgc:194887 [Source:ZFIN;Acc:ZDB-GENE-081022-162]
28. EPHB6 ENSDARG00000057729 223 0.927 - - - - - - 0.927 - - eph receptor B6 [Source:ZFIN;Acc:ZDB-GENE-100922-51]
29. FAM20A ENSDARG00000079486 61 0.922 - - - - - 0.922 - - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]
30. si:ch211-161h7.6 si:ch211-161h7.6 129 0.918 - - - - - 0.918 - - -
31. MFAP4_7 MFAP4_7 43 0.916 - - - - - - 0.916 - -
32. caspa ENSDARG00000008165 286 0.916 - - - - - 0.916 - - - caspase a [Source:ZFIN;Acc:ZDB-GENE-000616-3]
33. si:dkey-234h16.7 ENSDARG00000095754 115 0.914 - - - - - 0.914 - - - si:dkey-234h16.7 [Source:ZFIN;Acc:ZDB-GENE-060601-3]
34. ARHGAP6 33 0.912 - - - - - 0.912 - - - Rho GTPase activating protein 6
35. cetp ENSDARG00000030872 611 0.911 - - - - - 0.911 - - - cholesteryl ester transfer protein, plasma [Source:ZFIN;Acc:ZDB-GENE-041114-54]
36. atp2a2a ENSDARG00000029439 940 0.905 0.905 - - - - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a [Source:ZFIN;Acc:ZDB-GENE-040426-702]
37. tmigd1 ENSDARG00000007040 19 0.9 - - - - - - 0.900 - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
38. spint1b ENSDARG00000012467 97 0.897 - - - - - 0.897 - - - serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
39. mthfd1a ENSDARG00000018266 286 0.897 - - - - - 0.897 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1a, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:ZFIN;Acc:ZDB-GENE-041001-127]
40. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.895 - - - 0.895 - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
41. gart ENSDARG00000101089 6062 0.89 - - - - - 0.890 - - - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
42. cideb ENSDARG00000012640 620 0.888 - - - - - 0.888 - - - cell death-inducing DFFA-like effector b [Source:ZFIN;Acc:ZDB-GENE-080514-2]
43. SLC46A3 ENSDARG00000077313 162 0.887 - - - - - 0.887 - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
44. si:ch211-214j24.14 ENSDARG00000096037 536 0.885 0.885 - - - - - - - - si:ch211-214j24.14 [Source:ZFIN;Acc:ZDB-GENE-110914-226]
45. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 0.884 - - - - - 0.884 - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
46. cyp17a1 ENSDARG00000033566 284 0.884 - - - - - 0.884 - - - cytochrome P450, family 17, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040213-2]
47. DDHD1 DDHD1 250 0.884 - - - - - - 0.884 - -
48. mafbb ENSDARG00000070542, ENSDARG00000099120 1317 0.883 - - - - - 0.883 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Bb [Source:ZFIN;Acc:ZDB-GENE-010605-4]
49. pc pc 116 0.881 - - - - - 0.881 - - -
50. si:ch211-254n4.1 si:ch211-254n4.1 36 0.879 - - - - - - 0.879 - -
51. cry3 cry3 483 0.879 - - - - - 0.879 - - -
52. NCOA7_1 NCOA7_1 3222 0.878 - - - - - 0.878 - - -
53. has2 ENSDARG00000036987 349 0.876 - - - - - 0.876 - - - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
54. cryl1 ENSDARG00000003675, ENSDARG00000112171 1496 0.876 - - - - - 0.876 - - - crystallin, lambda 1 [Source:ZFIN;Acc:ZDB-GENE-060810-7]
55. masp2 ENSDARG00000007988 331 0.876 - - - - - 0.876 - - - mannan-binding lectin serine peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060130-154]
56. cyp2p6 ENSDARG00000042978 46 0.875 - - - - - - 0.875 - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
57. cyp2aa3 ENSDARG00000103347 880 0.875 - - - - - 0.875 - - - cytochrome P450, family 2, subfamily AA, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-031030-8]
58. ldhd ENSDARG00000038845 110 0.873 - - - - - 0.873 - - - lactate dehydrogenase D [Source:ZFIN;Acc:ZDB-GENE-030131-6140]
59. mgrn1a_1 ENSDARG00000100072 223 0.871 - - - - - 0.871 - - - mahogunin, ring finger 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6192]
60. PRODH2 PRODH2 1153 0.871 - - - - - 0.871 - - -
61. tpte ENSDARG00000056985 724 0.87 - - - - - 0.870 - - - transmembrane phosphatase with tensin homology [Source:ZFIN;Acc:ZDB-GENE-030131-5503]
62. erbb3a ENSDARG00000006202 903 0.869 - - - - - 0.869 - - - erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
63. FP102192.1 ENSDARG00000101104 32 0.868 - - - - - - - 0.868 - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
64. dlx6a ENSDARG00000042291 185 0.868 - - - - - 0.868 - - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
65. MAN2C1 ENSDARG00000079835 305 0.867 - - - - - 0.867 - - - mannosidase, alpha, class 2C, member 1 [Source:ZFIN;Acc:ZDB-GENE-101103-4]
66. CABZ01073174.1 CABZ01073174.1 581 0.866 - - - - - 0.866 - - -
67. smtnl ENSDARG00000055632, ENSDARG00000109489 788 0.864 - - - - - 0.864 - - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
68. hps5 ENSDARG00000071062 273 0.862 - - - - - - 0.862 - - Hermansky-Pudlak syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-070410-80]
69. iqgap2 ENSDARG00000060010 494 0.862 - - - - - 0.862 - - - IQ motif containing GTPase activating protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2878]
70. si:dkeyp-89c11.3 si:dkeyp-89c11.3 343 0.862 - - - - - 0.862 - - -
71. gnmt ENSDARG00000006840 2422 0.859 0.859 - - - - - - - - glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
72. rab8a ENSDARG00000067920 975 0.859 - - - - - - 0.859 - - RAB8A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070424-36]
73. pdpk1a ENSDARG00000062304 213 0.859 - - - - - 0.859 - - - 3-phosphoinositide dependent protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-109]
74. PCOLCE_1 PCOLCE_1 2148 0.858 - - - - - 0.858 - - -
75. fancc ENSDARG00000055232, ENSDARG00000116499 50 0.857 - - - - - 0.857 - - - FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
76. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 0.856 - - - - - - 0.856 - -
77. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 0.856 - - - - - 0.856 - - - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
78. slc25a17 ENSDARG00000061684, ENSDARG00000116998 820 0.855 - - - - - 0.855 - - - solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein), member 17 [Source:ZFIN;Acc:ZDB-GENE-070620-4]
79. cry3_1 cry3_1 3347 0.854 - - - - - 0.854 - - -
80. inadl 80 0.853 - - - - - 0.853 - - - InaD-like (Drosophila), transcript variant X4
81. pgpep1 ENSDARG00000054666 489 0.853 - - - - - 0.853 - - - pyroglutamyl-peptidase I [Source:ZFIN;Acc:ZDB-GENE-050522-88]
82. NAGPA ENSDARG00000075149 983 0.852 - - - - - 0.852 - - - N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070928-4]
83. pptc7a ENSDARG00000011122 739 0.85 - - - - - 0.850 - - - PTC7 protein phosphatase homolog a [Source:ZFIN;Acc:ZDB-GENE-041114-74]
84. GAS2L1 ENSDARG00000078803 315 0.85 - - - - - 0.850 - - - growth arrest-specific 2 like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-38]
85. ppat ENSDARG00000004517 3349 0.849 - - - - - 0.849 - - - phosphoribosyl pyrophosphate amidotransferase [Source:ZFIN;Acc:ZDB-GENE-041210-323]
86. foxo1a ENSDARG00000099555 288 0.846 - - - - - 0.846 - - - forkhead box O1 a [Source:ZFIN;Acc:ZDB-GENE-061013-59]
87. FAM149B1 ENSDARG00000061215 273 0.844 - - - - - - 0.844 - - family with sequence similarity 149, member B1 [Source:ZFIN;Acc:ZDB-GENE-070112-2102]
88. ZNF784_4 ZNF784_4 113 0.841 - - - - - - 0.841 - -
89. SYT7 SYT7 45 0.84 - - - - - 0.840 - - -
90. megf6a ENSDARG00000079199 103 0.84 - - - - - 0.840 - - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
91. qsox1 ENSDARG00000039459 320 0.838 - - - - - 0.838 - - - quiescin Q6 sulfhydryl oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7019]
92. si:dkey-115f9.3 7 0.838 - - - 0.838 - - - - - si:dkey-115f9.3, transcript variant X2
93. fshr ENSDARG00000071494, ENSDARG00000112820 3 0.838 - - - 0.838 - - - - - follicle stimulating hormone receptor [Source:ZFIN;Acc:ZDB-GENE-020423-5]
94. BX664622.1 ENSDARG00000101754 39 0.838 - - - 0.838 - - - - -
95. CR388129.2 CR388129.2 1 0.838 - - - 0.838 - - - - -
96. gphb5 ENSDARG00000027472 8 0.838 - - - 0.838 - - - - - glycoprotein hormone beta 5 [Source:ZFIN;Acc:ZDB-GENE-090319-4]
97. BX682234.3 BX682234.3 7 0.838 - - - 0.838 - - - - -
98. MUC5AC_2 MUC5AC_2 5 0.838 - - - 0.838 - - - - -
99. si:dkey-54j5.1 si:dkey-54j5.1 4 0.838 - - - 0.838 - - - - -
100. si:dkey-163m14.6 5 0.838 - - - 0.838 - - - - - si:dkey-163m14.6

There are 913 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA