Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-238c7.12

Gene Name Gene ID Reads Annotation
si:dkey-238c7.12 si:dkey-238c7.12 6600










Genes with expression patterns similar to si:dkey-238c7.12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-238c7.12 si:dkey-238c7.12 6600 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. HIPK1_1 HIPK1_1 8096 2.14 - 0.700 - 0.721 - - - - 0.719
3. eif3k ENSDARG00000068289 1102 1.948 - 0.967 0.981 - - - - - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]
4. psma6b ENSDARG00000013966 4410 1.907 - 0.926 0.981 - - - - - - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
5. eif4ebp2 ENSDARG00000031819 13168 1.863 - 0.961 0.902 - - - - - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
6. erlin1 ENSDARG00000021991 5664 1.77 - 0.954 - - - - 0.816 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
7. si:ch211-10d23.5 ENSDARG00000095510 2632 1.761 - - 0.983 0.778 - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
8. copg2 ENSDARG00000034823 4162 1.747 - 0.968 - - - - 0.779 - - coatomer protein complex, subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-000208-8]
9. vimp 4034 1.739 - 0.940 - - - - 0.799 - - VCP-interacting membrane selenoprotein
10. srp72 ENSDARG00000014139 5221 1.705 - 0.951 - - - 0.754 - - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
11. CHD1 ENSDARG00000103787 1645 1.703 - 0.945 - 0.758 - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
12. OMG OMG 1202 1.702 - 0.960 - - - - - 0.742 -
13. tbp ENSDARG00000014994 1591 1.696 - - 0.981 - - - 0.715 - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
14. rab5c ENSDARG00000026712 4733 1.694 - 0.929 - - - - 0.765 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
15. hmbox1a ENSDARG00000027082 2569 1.693 - - 0.985 - - - - - 0.708 homeobox containing 1a [Source:ZFIN;Acc:ZDB-GENE-050913-89]
16. sdf4 ENSDARG00000070682, ENSDARG00000109313 1623 1.683 - 0.981 - - - - 0.702 - - stromal cell derived factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2061]
17. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.679 - - 0.936 0.743 - - - - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
18. PSIP1 PSIP1 5252 1.678 0.707 0.971 - - - - - - -
19. flot2a ENSDARG00000004830 5276 1.669 - 0.943 - - - - 0.726 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
20. gna12a ENSDARG00000025826 1769 1.666 - 0.941 - - - - 0.725 - - guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
21. serbp1a ENSDARG00000074242 10818 1.663 - - 0.923 - - 0.740 - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
22. im:7136729 im:7136729 1625 1.655 - 0.950 - - - - 0.705 - -
23. hnrnpk ENSDARG00000018914 8841 1.652 - 0.902 - - - - 0.750 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
24. zfyve28 ENSDARG00000060430 797 1.652 - 0.951 - 0.701 - - - - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
25. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 1.582 0.703 - 0.879 - - - - - - proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
26. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.58 - 0.860 - - - - 0.720 - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
27. CR559945.3 CR559945.3 1029 1.561 - - - - - 0.839 0.722 - -
28. tbca ENSDARG00000016754 6427 1.542 - - - - - 0.754 0.788 - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
29. rbbp6 ENSDARG00000037919 4813 1.526 - 0.754 - - - - 0.772 - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
30. tfpia ENSDARG00000034718 1257 1.519 - - - - - 0.744 0.775 - - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
31. pdia3 ENSDARG00000102640 7239 1.516 - - - - - 0.752 0.764 - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
32. si:dkey-261h17.1 ENSDARG00000095268 11403 1.51 - - - - - 0.806 0.704 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
33. CABZ01044814.2 CABZ01044814.2 25711 1.507 - - - - 0.730 - - 0.777 -
34. wu:fa26c03 18714 1.507 - - - - 0.748 - - 0.759 - wu:fa26c03
35. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1.503 - - - - 0.720 - - 0.783 - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
36. si:dkey-269i1.3 18775 1.496 - - - - 0.725 - - 0.771 - si:dkey-269i1.3
37. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.477 - - - - - 0.768 - - 0.709 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
38. zgc:113054 ENSDARG00000053483 1079 1.464 - - - - - 0.747 0.717 - - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
39. pum1 ENSDARG00000099256 5017 1.455 - - - - - - 0.750 - 0.705 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
40. slc39a10 ENSDARG00000005823 2634 0.986 - - 0.986 - - - - - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
41. sh3bgrl3 ENSDARG00000098075 3071 0.985 - - 0.985 - - - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
42. AL772300.3 AL772300.3 1752 0.985 - - 0.985 - - - - - -
43. fam118b ENSDARG00000078983 1822 0.985 - - 0.985 - - - - - - family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
44. GSG2 GSG2 1162 0.984 - - 0.984 - - - - - -
45. tle2 5014 0.984 - - 0.984 - - - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
46. suz12a ENSDARG00000070256 2229 0.984 - - 0.984 - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
47. dnmt1 ENSDARG00000030756 2741 0.984 - - 0.984 - - - - - - DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
48. brd8 ENSDARG00000025071 2605 0.984 - - 0.984 - - - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
49. si:ch1073-286c18.5 ENSDARG00000098567 7391 0.983 - - 0.983 - - - - - - si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]
50. aup1 ENSDARG00000092609 2431 0.983 - - 0.983 - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
51. abca3b ENSDARG00000100524 2416 0.983 - - 0.983 - - - - - - ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
52. arl15b ENSDARG00000057995, ENSDARG00000109775 1243 0.983 - - 0.983 - - - - - - ADP-ribosylation factor-like 15b [Source:ZFIN;Acc:ZDB-GENE-080813-2]
53. rad23b ENSDARG00000021550 2575 0.983 - - 0.983 - - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]
54. taok2b_1 ENSDARG00000100620 2082 0.983 - - 0.983 - - - - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
55. ddx3 ddx3 4076 0.983 - - 0.983 - - - - - -
56. rab35 rab35 1287 0.983 - - 0.983 - - - - - -
57. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.983 - - 0.983 - - - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
58. pgam5 ENSDARG00000035608 4044 0.983 - - 0.983 - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
59. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.983 - - 0.983 - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
60. ENSDARG00000087348 ENSDARG00000087348 2870 0.983 - - 0.983 - - - - - -
61. trps1 ENSDARG00000104082 918 0.982 - - 0.982 - - - - - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
62. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.982 - - 0.982 - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
63. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.982 - - 0.982 - - - - - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
64. cdk2 ENSDARG00000026577 2835 0.982 - - 0.982 - - - - - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
65. zdhhc6 ENSDARG00000075721 1494 0.982 - - 0.982 - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
66. cops5 ENSDARG00000057624 1485 0.982 - - 0.982 - - - - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
67. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 0.982 - - 0.982 - - - - - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
68. FUZ ENSDARG00000079730 821 0.982 - - 0.982 - - - - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
69. pip5k2 pip5k2 5743 0.982 - - 0.982 - - - - - -
70. egr2a ENSDARG00000044098 1101 0.982 - - 0.982 - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
71. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.982 - - 0.982 - - - - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
72. rnmt ENSDARG00000070553 1743 0.982 - - 0.982 - - - - - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
73. rad54l ENSDARG00000018623 837 0.982 - - 0.982 - - - - - - RAD54 like [Source:ZFIN;Acc:ZDB-GENE-040426-968]
74. hyi ENSDARG00000030166 1199 0.982 - - 0.982 - - - - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
75. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.982 - - 0.982 - - - - - - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
76. CABZ01034082.1 ENSDARG00000099583 2237 0.982 - - 0.982 - - - - - -
77. DACT3_1 DACT3_1 1235 0.981 - - 0.981 - - - - - -
78. dnajc2 ENSDARG00000070477 902 0.981 - - 0.981 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1912]
79. ptbp2a ENSDARG00000101947 1921 0.981 - - 0.981 - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
80. pde12 ENSDARG00000030964 615 0.981 - - 0.981 - - - - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
81. map3k3 ENSDARG00000060348 1482 0.981 - - 0.981 - - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
82. slc4a2b ENSDARG00000052330 1900 0.981 - - 0.981 - - - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
83. wnt7bb ENSDARG00000071107 1158 0.981 - - 0.981 - - - - - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
84. METTL18 ENSDARG00000074588 918 0.981 - - 0.981 - - - - - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
85. poc5 ENSDARG00000059982 569 0.981 - - 0.981 - - - - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
86. lipg ENSDARG00000031044 1516 0.981 - - 0.981 - - - - - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
87. lmx1bb ENSDARG00000068365 627 0.981 - - 0.981 - - - - - - LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]
88. C5H2orf68 C5H2orf68 849 0.981 - - 0.981 - - - - - -
89. si:ch211-266d19.4 ENSDARG00000012642 1251 0.981 - - 0.981 - - - - - - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
90. PYURF ENSDARG00000045773 4576 0.98 - - 0.980 - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
91. serpine2 ENSDARG00000029353 2274 0.98 - - 0.980 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
92. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 0.979 - - 0.979 - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
93. gnb4b ENSDARG00000115383 7457 0.979 - - 0.979 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
94. clic4 ENSDARG00000022995 6064 0.978 - - 0.978 - - - - - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
95. kmt2cb ENSDARG00000075560 4816 0.977 - - 0.977 - - - - - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
96. sri ENSDARG00000058593 13152 0.977 - - 0.977 - - - - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
97. msxc msxc 3142 0.977 - - 0.977 - - - - - -
98. sypl2b ENSDARG00000000690 2006 0.977 - - 0.977 - - - - - - synaptophysin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050417-309]
99. btg2 ENSDARG00000020298 6616 0.976 - - 0.976 - - - - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
100. ndufv3 ENSDARG00000090389 4829 0.975 - - 0.975 - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]

There are 728 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA