Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-235h8.1

Gene Name Gene ID Reads Annotation
si:dkey-235h8.1 si:dkey-235h8.1 2457










Genes with expression patterns similar to si:dkey-235h8.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-235h8.1 si:dkey-235h8.1 2457 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. sprn ENSDARG00000056004 128 3.15 - - 0.761 - - 0.816 0.794 0.779 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
3. fezf2 ENSDARG00000070677 224 3.148 - - 0.882 0.747 0.760 - - - 0.759 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
4. st18 663 3.086 - - - 0.727 - 0.861 0.707 0.791 - suppression of tumorigenicity 18, zinc finger
5. zbtb18 ENSDARG00000028228 3653 3.046 - - - 0.704 - 0.808 - 0.769 0.765 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
6. dlx1a ENSDARG00000013125 142 3.024 - - 0.817 - 0.763 - - 0.742 0.702 distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
7. marcksa ENSDARG00000004049 2518 2.994 - - - 0.766 - 0.736 - 0.762 0.730 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
8. eomesa ENSDARG00000006640 257 2.627 - - 0.856 - 0.771 - 1.000 - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
9. sncb ENSDARG00000104945 8197 2.605 - - - - - 0.939 - 0.824 0.842 synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
10. celf3a ENSDARG00000034668 2432 2.521 - - - - - 0.823 - 0.886 0.812 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
11. GADD45G_1 GADD45G_1 236 2.496 - - - - - 0.754 0.969 0.773 -
12. lhx5 ENSDARG00000057936 785 2.489 - - 0.726 - - 0.947 - 0.816 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
13. tuba1c ENSDARG00000055216 8384 2.473 - - - - - 0.924 - 0.750 0.799 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
14. fez1 ENSDARG00000023174 701 2.441 - - - - - 0.882 - 0.817 0.742 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
15. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.434 - - - - - 0.868 - 0.835 0.731 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
16. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.433 - - - 0.829 - 0.841 - - 0.763 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
17. dpysl5a ENSDARG00000011141 1827 2.404 - - - - - 0.895 - 0.734 0.775 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
18. foxg1a ENSDARG00000070769 928 2.388 - - 0.875 - 0.777 - - - 0.736 forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
19. si:ch73-21g5.7 ENSDARG00000093156 9412 2.379 - - - 0.783 - 0.751 - 0.845 - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
20. lhx2b ENSDARG00000031222 517 2.379 - - 0.926 - 0.724 - - 0.729 - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
21. C7H4orf48 C7H4orf48 1455 2.376 - - - - - 0.912 0.729 0.735 -
22. mdkb ENSDARG00000020708 5393 2.37 - - - 0.766 - 0.873 - 0.731 - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
23. stmn1b ENSDARG00000033655 9491 2.367 - - - - - 0.870 - 0.765 0.732 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
24. Sep-03 Sep-03 1124 2.358 - - - - - 0.923 0.733 - 0.702
25. lhx9 ENSDARG00000056979 249 2.342 - - - 0.766 0.814 - - - 0.762 LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
26. marcksb ENSDARG00000008803 42949 2.341 - - - - - 0.769 - 0.771 0.801 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
27. cspg5a ENSDARG00000069981 1699 2.334 - - - 0.738 - 0.800 - 0.796 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
28. BX324132.5 BX324132.5 115 2.317 - - - - 0.759 - - 0.801 0.757
29. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 2.316 - - - - - 0.756 - 0.773 0.787 zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
30. TTYH1 ENSDARG00000076804 399 2.306 - - - - - 0.701 0.816 - 0.789 tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
31. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.303 - - - 0.744 - 0.751 - - 0.808 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
32. ndrg4 ENSDARG00000103937 1234 2.302 - - - 0.756 - 0.817 - - 0.729 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
33. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.289 - - - - - 0.756 0.762 - 0.771 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
34. rap2ip rap2ip 681 2.284 - - - - - 0.842 0.702 0.740 -
35. ADAM22 ENSDARG00000060532 2259 2.249 - - - - - 0.768 - 0.778 0.703 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
36. plp1a ENSDARG00000103732 3544 2.241 - - - 0.747 - 0.779 - 0.715 - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
37. cxxc4 ENSDARG00000077817 197 2.228 - - 0.702 - - - 0.813 - 0.713 CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
38. tox ENSDARG00000032317 9126 2.226 - - - - - 0.768 - 0.704 0.754 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
39. arnt2 ENSDARG00000103697 5731 2.214 - - - - - 0.708 0.717 0.789 - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
40. hes2.2 ENSDARG00000068168 197 2.2 - - - 0.776 - - - 0.716 0.708 hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
41. MCTP1 MCTP1 219 1.857 - - - - - 0.952 0.905 - -
42. PRR12 PRR12 38 1.857 - - - - - 0.857 1.000 - -
43. ptf1a ENSDARG00000014479 349 1.839 - - - - - 0.839 1.000 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
44. tbr1a ENSDARG00000076259 341 1.836 - - 0.836 - - - 1.000 - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
45. CNTNAP3 ENSDARG00000067824 25 1.814 - - - - - 0.814 1.000 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
46. mllt11 ENSDARG00000071026 2518 1.796 - - - - - 0.931 - 0.865 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
47. atoh7 ENSDARG00000069552 254 1.768 - - 0.768 - - - 1.000 - - atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
48. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1.764 - - - - - 0.985 0.779 - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
49. nrxn3b ENSDARG00000062693 192 1.758 - - - - - 0.901 0.857 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
50. CR388231.1 ENSDARG00000098710 153 1.733 - - - - - 0.801 0.932 - -
51. tbr1b ENSDARG00000004712 248 1.725 - - 0.904 - 0.821 - - - - T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
52. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.723 - - - - - 0.925 - 0.798 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
53. adam23a ENSDARG00000062323 580 1.718 - - - - - 0.976 0.742 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
54. tmeff1b ENSDARG00000056740 11253 1.717 - - - 0.838 - 0.879 - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
55. clock clock 32 1.711 - - 0.711 - - - 1.000 - -
56. her4.1 ENSDARG00000056732 1264 1.706 - - - - - 0.936 - 0.770 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
57. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.704 - - - - - 0.885 - 0.819 - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
58. gsx1 ENSDARG00000035735 1243 1.702 - - - - - 0.925 - 0.777 - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
59. golga7ba ENSDARG00000036295 1460 1.692 - - - 0.889 - - - 0.803 - golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
60. atp2b3b ENSDARG00000023445 1424 1.681 - - - - - 0.910 0.771 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
61. diras1a ENSDARG00000028066 126 1.675 - - - - - 0.799 0.876 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
62. adcyap1b ENSDARG00000027740 1539 1.672 - - - - - 0.935 - 0.737 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
63. si:dkey-100n10.2 101 1.665 - - - - - 0.760 0.905 - - si:dkey-100n10.2
64. scrt1a ENSDARG00000100821 2687 1.665 - - - - - 0.955 - 0.710 - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
65. TTBK1_1 TTBK1_1 132 1.664 - - - - - 0.773 0.891 - -
66. chrna6 ENSDARG00000055559 60 1.659 - - - - - 0.721 0.938 - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
67. hes6 ENSDARG00000019335 4754 1.658 - - - - - 0.827 - - 0.831 hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
68. pcdh1gc5 ENSDARG00000104826 10052 1.656 - - - - - 0.905 - 0.751 - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
69. runx3 ENSDARG00000052826 247 1.654 - - - - - 0.806 0.848 - - runt-related transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]
70. rcor2 ENSDARG00000008278 1678 1.65 - - - - - 0.852 - 0.798 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
71. vax2 ENSDARG00000058702 175 1.649 - - 0.929 - 0.720 - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
72. lgi1a ENSDARG00000020493 1218 1.646 - - - - - 0.842 0.804 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
73. dpysl3 ENSDARG00000002587 4381 1.643 - - - - - 0.878 - - 0.765 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
74. AKT3 AKT3 1729 1.637 - - - - - 0.917 - 0.720 -
75. pax6a ENSDARG00000103379 3061 1.636 - - - - - 0.888 - 0.748 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
76. slitrk2 ENSDARG00000006636 40 1.636 - - - - - 0.707 0.929 - - SLIT and NTRK-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-080327-7]
77. RNF208 ENSDARG00000078056 60 1.633 - - - - - 0.839 0.794 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
78. SACS_1 SACS_1 234 1.632 - - - - - 0.752 0.880 - -
79. prdm13 ENSDARG00000078701 205 1.627 - - - - - 0.791 0.836 - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
80. nfia ENSDARG00000062420 573 1.624 - - 0.807 - - - - 0.817 - nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]
81. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.623 - - - - - 0.923 - 0.700 - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
82. id4 ENSDARG00000045131 2916 1.622 - - - - - 0.790 - 0.832 - inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
83. egr3 ENSDARG00000089156 71 1.622 - - 0.786 - - - 0.836 - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
84. shisa7 shisa7 181 1.614 - - - - - 0.736 0.878 - -
85. ascl1a ENSDARG00000038386 1290 1.614 - - - - - - 0.834 0.780 - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
86. RAB39B RAB39B 482 1.613 - - - - - 0.790 0.823 - -
87. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.61 - - - - - - - 0.856 0.754 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
88. pou4f2 ENSDARG00000069737 451 1.605 - - - - - 0.898 - 0.707 - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
89. zgc:194665 ENSDARG00000004577 136 1.605 - - - - - 0.795 0.810 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
90. bcl11ab ENSDARG00000063153 3032 1.603 - - - - - 0.845 - - 0.758 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
91. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.6 - - - - - 0.775 - 0.825 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
92. insm1a ENSDARG00000091756 1838 1.599 - - - 0.700 - - - 0.899 - insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
93. rbm4.3 ENSDARG00000022129 28571 1.598 - - - - - - - 0.816 0.782 RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
94. prdm1b ENSDARG00000098925 440 1.598 - - 0.760 - 0.838 - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
95. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.597 - - - - - 0.886 - - 0.711 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
96. SLITRK4 ENSDARG00000079781 54 1.597 - - - - - 0.756 0.841 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
97. otx2 766 1.592 - - - - - - - 0.818 0.774 orthodenticle homeobox 2, transcript variant X2
98. ldb1a ENSDARG00000010137 3035 1.59 - - - 0.831 - - - 0.759 - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
99. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.584 - - - - - - - 0.880 0.704 SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
100. wu:fc51f04 wu:fc51f04 7074 1.581 - - - - - - - 0.814 0.767

There are 1388 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA