Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-235d18.5

Gene Name Gene ID Reads Annotation
si:dkey-235d18.5 ENSDARG00000039652 667 si:dkey-235d18.5 [Source:ZFIN;Acc:ZDB-GENE-041014-243]










Genes with expression patterns similar to si:dkey-235d18.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-235d18.5 ENSDARG00000039652 667 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-235d18.5 [Source:ZFIN;Acc:ZDB-GENE-041014-243]
2. unc5b ENSDARG00000033327 3432 1.8 - - - - - 0.849 0.951 - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
3. ENSDARG00000058255 ENSDARG00000058255 1715 1.789 0.811 - - - - - 0.978 - -
4. myof ENSDARG00000006112 618 1.787 - - - - - 0.830 0.957 - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
5. dlx4b ENSDARG00000071560 446 1.747 0.806 - - - - - 0.941 - - distal-less homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-990415-50]
6. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.709 - 0.789 - - - - 0.920 - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
7. slc25a25a ENSDARG00000010572 1240 1.703 0.838 - - - - - 0.865 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25a [Source:ZFIN;Acc:ZDB-GENE-040426-2396]
8. dkk1b ENSDARG00000045219, ENSDARG00000112504 1047 1.7 0.738 - - - - - 0.962 - - dickkopf WNT signaling pathway inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-990708-5]
9. svopl ENSDARG00000057983, ENSDARG00000116460 975 1.686 - - - - - - 0.948 0.738 - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
10. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 1.683 0.762 - - - - - 0.921 - - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
11. zc3h18 ENSDARG00000062506 1676 1.679 - - - - - - 0.939 0.740 - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
12. cux1b ENSDARG00000043134 641 1.668 - - - - - - 0.937 0.731 - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
13. sdpra sdpra 4594 1.666 - - - - - - 0.925 0.741 -
14. zdhhc5a ENSDARG00000016263 625 1.653 - - - - - 0.703 0.950 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
15. cpsf2 ENSDARG00000028971 841 1.64 - - - - - - 0.935 0.705 - cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]
16. gli1 ENSDARG00000101244 534 1.638 - - - - 0.704 - 0.934 - - GLI family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-030321-1]
17. FAM83G ENSDARG00000062929 1142 1.632 0.828 - - - - - - 0.804 - family with sequence similarity 83 member G [Source:HGNC Symbol;Acc:HGNC:32554]
18. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.602 - 0.764 - - - - 0.838 - - connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
19. tmbim4 ENSDARG00000014361 2549 1.59 - - - - - 0.744 0.846 - - transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
20. CABZ01068208.1 ENSDARG00000112675 414 1.59 - 0.767 - - - 0.823 - - -
21. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.588 0.700 - - - - - 0.888 - - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
22. si:dkey-193p11.2 ENSDARG00000096712 3500 1.58 - - - - - 0.713 0.867 - - si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
23. hoxc3a ENSDARG00000070339 3379 1.573 - - - - - - 0.855 0.718 - homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
24. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.546 0.712 - - - - - 0.834 - - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
25. limk2 ENSDARG00000005104 2598 1.531 - 0.704 - - - 0.827 - - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
26. tgm1 ENSDARG00000017799 442 1.514 0.711 - - - - - - 0.803 - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
27. FBLN1 ENSDARG00000103311 877 1.481 0.741 - - - - - - 0.740 - fibulin 1 [Source:NCBI gene;Acc:30240]
28. ecm2 ENSDARG00000071549 1527 1.471 0.716 - - - - - 0.755 - - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
29. setd5 ENSDARG00000078576 1974 1.459 - 0.715 - - - 0.744 - - - SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
30. HHLA2_2 HHLA2_2 857 1.454 0.716 0.738 - - - - - - -
31. dlx5a ENSDARG00000042296 3477 1.437 0.721 - - - - 0.716 - - - distal-less homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-990415-49]
32. arl4ca ENSDARG00000057606 4686 1.422 - 0.715 - - - - 0.707 - - ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
33. ankrd50l ENSDARG00000007077 1115 0.987 - - - - - - 0.987 - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
34. b3gnt3.3 ENSDARG00000093521 430 0.984 - - - - - - 0.984 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-12]
35. wbscr22 wbscr22 644 0.983 - - - - - - 0.983 - -
36. rpz2 ENSDARG00000091215 765 0.983 - - - - - - 0.983 - - rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
37. FAM110D FAM110D 3632 0.982 - - - - - - 0.982 - -
38. wu:fc34e06 1793 0.982 - - - - - - 0.982 - - wu:fc34e06, transcript variant X10
39. zgc:163030 ENSDARG00000069192 2963 0.98 - - - - - - 0.980 - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
40. clptm1l ENSDARG00000021048 1234 0.98 - - - - - - 0.980 - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
41. fbp1a ENSDARG00000021366 1778 0.979 - - - - - - 0.979 - - fructose-1,6-bisphosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7171]
42. supt4h1 ENSDARG00000113969 1024 0.979 - - - - - - 0.979 - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
43. hsd11b3a hsd11b3a 1388 0.977 - - - - - - 0.977 - -
44. MFAP3L ENSDARG00000062752, ENSDARG00000115337 1373 0.977 - - - - - - 0.977 - - microfibril associated protein 3 like [Source:ZFIN;Acc:ZDB-GENE-111229-2]
45. FUCA1 FUCA1 1446 0.975 - - - - - - 0.975 - -
46. col14a1a ENSDARG00000005762 4778 0.975 - - - - - - 0.975 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
47. sp3b ENSDARG00000007812 2928 0.974 - - - - - - 0.974 - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
48. TAF2 ENSDARG00000102307 1401 0.972 - - - - - - 0.972 - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
49. sp1 ENSDARG00000088347 1697 0.972 - - - - - - 0.972 - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
50. RBBP8NL RBBP8NL 813 0.971 - - - - - - 0.971 - -
51. ube2e1 ENSDARG00000116649 10656 0.971 - - - - - - 0.971 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
52. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 0.97 - - - - - - 0.970 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
53. laptm4b ENSDARG00000035870, ENSDARG00000110893 960 0.969 - - - - - - 0.969 - - lysosomal protein transmembrane 4 beta [Source:ZFIN;Acc:ZDB-GENE-030616-616]
54. uba5 ENSDARG00000063588 1260 0.969 - - - - - - 0.969 - - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
55. eif2ak3 ENSDARG00000062139 3276 0.969 - - - - - - 0.969 - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
56. cux2a 493 0.969 - - - - - - 0.969 - - cut-like homeobox 2a
57. med27 ENSDARG00000009681 1857 0.969 - - - - - - 0.969 - - mediator complex subunit 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1601]
58. pex14 ENSDARG00000028322 1087 0.968 - - - - - - 0.968 - - peroxisomal biogenesis factor 14 [Source:ZFIN;Acc:ZDB-GENE-060130-169]
59. sptbn2 ENSDARG00000053956 8452 0.967 - - - - - - 0.967 - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
60. CU929378.1 CU929378.1 514 0.967 - - - - - - 0.967 - -
61. wipi1 ENSDARG00000040657 2732 0.967 - - - - - - 0.967 - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
62. stambpa ENSDARG00000054501 568 0.966 - - - - - - 0.966 - - STAM binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1551]
63. gnb1b_1 ENSDARG00000104372 3728 0.966 - - - - - - 0.966 - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
64. ccdc102a ENSDARG00000003872 791 0.965 - - - - - - 0.965 - - coiled-coil domain containing 102A [Source:ZFIN;Acc:ZDB-GENE-030131-4044]
65. ddb1 ENSDARG00000074431 1054 0.964 - - - - - - 0.964 - - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
66. coro1a ENSDARG00000054610, ENSDARG00000111327 479 0.963 - - - - - - 0.963 - - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
67. frem1a ENSDARG00000069473 1847 0.963 - - - - - - 0.963 - - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
68. nup107 ENSDARG00000016010 1043 0.963 - - - - - - 0.963 - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
69. si:dkeyp-120h9.1 ENSDARG00000020278 3120 0.962 - - - - - - 0.962 - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
70. dusp2 ENSDARG00000098108 353 0.961 - - - - - - 0.961 - - dual specificity phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-188]
71. srm ENSDARG00000055760 6572 0.961 - - - - - - 0.961 - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
72. COL13A1 1565 0.961 - - - - - - 0.961 - - collagen, type XIII, alpha 1, transcript variant X1
73. pcid2 ENSDARG00000013802 1596 0.96 - - - - - - 0.960 - - PCI domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-79]
74. tyms ENSDARG00000042894 3068 0.96 - - - - - - 0.960 - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
75. CU638740.1 CU638740.1 398 0.96 - - - - - - 0.960 - -
76. hnrpkl ENSDARG00000007034 4660 0.958 - - - - - - 0.958 - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
77. NUAK1_1 NUAK1_1 1782 0.957 - - - - - - 0.957 - -
78. pld1a ENSDARG00000056228 765 0.957 - - - - - - 0.957 - - phospholipase D1a [Source:ZFIN;Acc:ZDB-GENE-031002-2]
79. cul1b ENSDARG00000007691 719 0.957 - - - - - - 0.957 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
80. ef1 1343 0.956 - - - - - - 0.956 - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
81. ubap2l ENSDARG00000063219 1147 0.956 - - - - - - 0.956 - - ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
82. phf21ab ENSDARG00000021378 1706 0.955 - - - - - - 0.955 - - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
83. cdk16_1 ENSDARG00000032072 2031 0.955 - - - - - - 0.955 - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
84. ncapg2 ENSDARG00000060023 993 0.955 - - - - - - 0.955 - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
85. adipor1b ENSDARG00000042717 1348 0.955 - - - - - - 0.955 - - adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
86. CTBP1 ENSDARG00000057007, ENSDARG00000115804 2088 0.954 - - - - - - 0.954 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
87. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 0.954 - - - - - - 0.954 - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
88. atf6 ENSDARG00000012656 3873 0.953 - - - - - - 0.953 - - activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
89. rpz5 ENSDARG00000075718 1703 0.952 - - - - - - 0.952 - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
90. col6a1 ENSDARG00000074908 2339 0.952 - - - - - - 0.952 - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
91. lamb4 ENSDARG00000039133 1220 0.951 - - - - - - 0.951 - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
92. CACHD1 ENSDARG00000061590 1287 0.951 - - - - - - 0.951 - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
93. prkaa1 ENSDARG00000060596 1448 0.95 - - - - - - 0.950 - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030325-1]
94. rabggtb ENSDARG00000068587 1935 0.95 - - - - - - 0.950 - - Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]
95. BAX BAX 1673 0.949 - - - - - - - 0.949 -
96. ap1s1 ENSDARG00000056803 3854 0.949 - - - - - - 0.949 - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
97. ik ENSDARG00000004161 3132 0.949 - - - - - - 0.949 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
98. prkcda ENSDARG00000009208 1508 0.949 - - - - - - 0.949 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
99. bdh2 ENSDARG00000052696 1157 0.949 - - - - - - 0.949 - - 3-hydroxybutyrate dehydrogenase, type 2 [Source:ZFIN;Acc:ZDB-GENE-050417-343]
100. dnmt1 ENSDARG00000030756 2741 0.949 - - - - - - 0.949 - - DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]

There are 771 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA