Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-234k7.2

Gene Name Gene ID Reads Annotation
si:dkey-234k7.2 si:dkey-234k7.2 4










Genes with expression patterns similar to si:dkey-234k7.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-234k7.2 si:dkey-234k7.2 4 4 - - 1.000 1.000 1.000 1.000 - - -
2. wisp3 ENSDARG00000071048 15 1.872 - - 0.989 0.883 - - - - - WNT1 inducible signaling pathway protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-86]
3. smc1a ENSDARG00000055754 62 1.86 - - 1.000 0.860 - - - - - structural maintenance of chromosomes 1A [Source:ZFIN;Acc:ZDB-GENE-090506-9]
4. ANKRD27 ENSDARG00000089207 3 1.809 - - 1.000 - 0.809 - - - - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
5. gpr55a ENSDARG00000043447 12 1.716 - - 0.927 - 0.789 - - - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
6. si:dkey-117n7.4 ENSDARG00000092064 22 1.697 - - 0.795 0.902 - - - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
7. SNORA42 SNORA42 24 1.681 - - - 0.942 - 0.739 - - -
8. BX546499.2 ENSDARG00000093947 26 1.667 - - 0.713 - - 0.954 - - -
9. prox1b ENSDARG00000088810, ENSDARG00000113014 33 1.577 - - - - 0.831 0.746 - - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
10. FBLN7 ENSDARG00000089519 4 1 - - - - - 1.000 - - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
11. LOXL2 LOXL2 2 1 - - - 1.000 - - - - -
12. eif3bb ENSDARG00000074213 2 1 - - 1.000 - - - - - - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
13. si:ch211-128b10.4 si:ch211-128b10.4 3 1 - - - - - 1.000 - - -
14. skor1a ENSDARG00000069030 19 1 - - - - - 1.000 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
15. FAM120B ENSDARG00000030804 1 1 - - - - - 1.000 - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
16. KCNA2_1 KCNA2_1 15 1 - - - - - 1.000 - - -
17. ZNF337_16 ZNF337_16 22 1 - - - - - 1.000 - - -
18. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - 1.000 - - - leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
19. nmu ENSDARG00000043299 67 1 - - - - - 1.000 - - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
20. si:dkey-11p10.7 si:dkey-11p10.7 1 1 - - - 1.000 - - - - -
21. zgc:92249 14 1 - - - - - 1.000 - - - zgc:92249
22. CR925813.2 CR925813.2 9 1 - - - 1.000 - - - - -
23. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
24. CR381630.1 CR381630.1 23 1 - - - - - 1.000 - - -
25. prepl ENSDARG00000017853, ENSDARG00000114415 4 1 - - - - - 1.000 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
26. shank3a ENSDARG00000063332 5 1 - - - - - 1.000 - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
27. rhbdd3 ENSDARG00000079816 2 1 - - - - - 1.000 - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
28. zgc:113263 ENSDARG00000045842 51 1 - - - - - 1.000 - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
29. si:dkey-284p5.3 ENSDARG00000095638 4 1 - - - - - 1.000 - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
30. lgals3bpa ENSDARG00000037805 2 1 - - - 1.000 - - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
31. fgfr1b ENSDARG00000011190 10 1 - - - 1.000 - - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
32. LAMA3 ENSDARG00000071462 5 1 - - - - - 1.000 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
33. CR388129.1 ENSDARG00000097173 89 1 - - - - - 1.000 - - -
34. si:dkey-28i19.1 ENSDARG00000104888 3 1 - - - 1.000 - - - - - si:dkey-28i19.1 [Source:ZFIN;Acc:ZDB-GENE-110914-21]
35. hmgb2a ENSDARG00000029722 28 1 - - - - - 1.000 - - - high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]
36. JAKMIP1 ENSDARG00000076090 55 1 - - - - - 1.000 - - - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
37. Metazoa_SRP_16 Metazoa_SRP_16 2 1 - - - 1.000 - - - - -
38. hsd17b7_1 ENSDARG00000088140 36 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
39. zgc:77112 ENSDARG00000015657 24 1 - - - - - 1.000 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
40. cecr1b 2 1 - - - - - 1.000 - - - cat eye syndrome chromosome region, candidate 1b
41. BX005052.1 BX005052.1 16 1 - - - - - 1.000 - - -
42. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - - 1.000 - - - - - -
43. CR678040.1 CR678040.1 117 1 - - - - - 1.000 - - -
44. ppp4r4 ENSDARG00000010407 1 1 - - - - - 1.000 - - - protein phosphatase 4, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041001-164]
45. zgc:171779 ENSDARG00000016908 26 1 - - - - 1.000 - - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
46. pygo1 ENSDARG00000098687 4 1 - - - - - 1.000 - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
47. gabbr1a ENSDARG00000018967 2 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
48. tnk2b ENSDARG00000104409 1 1 - - - - - 1.000 - - - tyrosine kinase, non-receptor, 2b [Source:ZFIN;Acc:ZDB-GENE-110411-165]
49. BRINP3 BRINP3 11 1 - - - - - 1.000 - - -
50. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - 1.000 - - - - - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
51. si:ch211-208f21.4 si:ch211-208f21.4 4 1 - - - - - 1.000 - - -
52. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - 1.000 - - -
53. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - - - - - 1.000 - - -
54. CCDC87 ENSDARG00000045683 27 1 - - 1.000 - - - - - - coiled-coil domain containing 87 [Source:ZFIN;Acc:ZDB-GENE-041210-118]
55. rbp1b rbp1b 36 1 - - - - - 1.000 - - -
56. trim9 ENSDARG00000039123 53 1 - - - - - 1.000 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
57. BX323448.1 ENSDARG00000116236 10 1 - - - - - 1.000 - - -
58. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 1 - - - - - 1.000 - - - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
59. TDRD6 ENSDARG00000070052 1 1 - - - - - 1.000 - - - tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
60. porcnl ENSDARG00000052455 29 1 - - - - - 1.000 - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
61. psmb11 psmb11 5 1 - - - - - 1.000 - - -
62. ccr7 ENSDARG00000044561 2 1 - - - - - 1.000 - - - chemokine (C-C motif) receptor 7 [Source:ZFIN;Acc:ZDB-GENE-060522-2]
63. barhl1b ENSDARG00000019013, ENSDARG00000113145 101 1 - - - - - 1.000 - - - BarH-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-060118-2]
64. CABZ01069239.1 CABZ01069239.1 1 1 - - 1.000 - - - - - -
65. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - - - - 1.000 - - -
66. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
67. ube2l3b ENSDARG00000027141 26 1 - - - 1.000 - - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
68. crygm2d14 ENSDARG00000087301 66 1 - - - - - 1.000 - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
69. PLCB1 2 1 - - - - - 1.000 - - - phospholipase C beta 1
70. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - - - 1.000 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
71. BX248324.1 ENSDARG00000096489 3 1 - - - - - 1.000 - - -
72. CABZ01109624.1 CABZ01109624.1 25 1 - - - 1.000 - - - - -
73. phf11 ENSDARG00000021677 11 1 - - - 1.000 - - - - - PHD finger protein 11 [Source:ZFIN;Acc:ZDB-GENE-081104-417]
74. OSBPL1A ENSDARG00000105147 16 1 - - - - - 1.000 - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
75. NLRC5 ENSDARG00000024631 11 1 - - - 1.000 - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
76. xcr1a xcr1a 3 1 - - - - - 1.000 - - -
77. CABZ01063402.1 CABZ01063402.1 64 1 - - - - - 1.000 - - -
78. FAM177A1 ENSDARG00000079636 19 1 - - - - - 1.000 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
79. FER1L6 ENSDARG00000019316 5 1 - - 1.000 - - - - - - fer-1-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-312]
80. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - - 1.000 - - -
81. dab1b ENSDARG00000003290 7 1 - - - - - 1.000 - - - Dab, reelin signal transducer, homolog 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060421-7958]
82. ACSL6 12 1 - - - - - 1.000 - - - acyl-CoA synthetase long-chain family member 6
83. npy4r ENSDARG00000043341, ENSDARG00000113787 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y4 [Source:ZFIN;Acc:ZDB-GENE-980526-393]
84. f13b ENSDARG00000101353 2 1 - - 1.000 - - - - - - coagulation factor XIII, B polypeptide [Source:ZFIN;Acc:ZDB-GENE-050208-701]
85. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - 1.000 - - - - -
86. nsfa ENSDARG00000007654 16 1 - - - - - 1.000 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
87. si:ch211-245l1.1 si:ch211-245l1.1 1 1 - - - - - 1.000 - - -
88. SYT17 ENSDARG00000060741 1 1 - - - - - 1.000 - - - synaptotagmin XVII [Source:ZFIN;Acc:ZDB-GENE-090527-1]
89. wnt10b ENSDARG00000040925 162 1 - - - - - 1.000 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
90. CABZ01009626.1 CABZ01009626.1 2 1 - - - - - 1.000 - - -
91. entpd2b ENSDARG00000044795 7 1 - - - 1.000 - - - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
92. si:ch211-168h21.3 10 1 - - - - - 1.000 - - - si:ch211-168h21.3
93. prkar2ab ENSDARG00000009477 2 1 - - - 1.000 - - - - - protein kinase, cAMP-dependent, regulatory, type II, alpha, B [Source:ZFIN;Acc:ZDB-GENE-040426-2427]
94. wfs1b ENSDARG00000074617 69 1 - - - - - 1.000 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
95. mapk9 ENSDARG00000077364 38 1 - - - - - 1.000 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
96. cyp2n13 ENSDARG00000042953 10 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
97. syt9b ENSDARG00000029239 31 1 - - - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
98. ugt2b5 ugt2b5 17 1 - - 1.000 - - - - - -
99. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - - 1.000 - - -
100. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - - - - - 1.000 - - -

There are 527 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA