Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-233h12.4

Gene Name Gene ID Reads Annotation
si:dkey-233h12.4 si:dkey-233h12.4 2










Genes with expression patterns similar to si:dkey-233h12.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-233h12.4 si:dkey-233h12.4 2 5 1.000 - - 1.000 - - 1.000 1.000 1.000
2. klf5b ENSDARG00000062106 7 2 - - - 1.000 - - - - 1.000 Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
3. prph2a ENSDARG00000038018 2 2 - - - 1.000 - - 1.000 - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
4. slc5a9 ENSDARG00000005518 16 2 1.000 - - - - - 1.000 - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
5. plscr3a ENSDARG00000093078 7 2 - - - 1.000 - - 1.000 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
6. CABZ01087025.1 ENSDARG00000117232 10 2 - - - - - - - 1.000 1.000
7. zgc:153932 ENSDARG00000052779, ENSDARG00000113315 3 2 - - - - - - 1.000 - 1.000 zgc:153932 [Source:ZFIN;Acc:ZDB-GENE-070209-223]
8. CABZ01084273.1 CABZ01084273.1 16 2 - - - 1.000 - - 1.000 - -
9. PFKL PFKL 9 2 1.000 - - - - - 1.000 - -
10. si:dkey-179o14.4 si:dkey-179o14.4 2 2 - - - 1.000 - - - 1.000 -
11. si:ch211-117m20.4 ENSDARG00000094286 7 2 - - - 1.000 - - 1.000 - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
12. asap3 ENSDARG00000021896 19 2 - - - - - - 1.000 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
13. si:dkey-54g2.5 si:dkey-54g2.5 2 2 - - - - - - - 1.000 1.000
14. med8 ENSDARG00000114425 7 1.95 - - - 1.000 - - - - 0.950 mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
15. SMARCA4 ENSDARG00000104339 48 1.942 0.942 - - - - - 1.000 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
16. psmb11 psmb11 5 1.927 - - - - - - - 1.000 0.927
17. CIT_1 CIT_1 6 1.926 1.000 - - - - - - - 0.926
18. si:ch211-267e7.22 si:ch211-267e7.22 34 1.922 - - - - - - 1.000 - 0.922
19. si:ch211-119d14.3 ENSDARG00000075332 12 1.912 - - - 0.912 - - 1.000 - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
20. olfm3a ENSDARG00000071493, ENSDARG00000110039 46 1.849 - - - - - - 1.000 - 0.849 olfactomedin 3a [Source:ZFIN;Acc:ZDB-GENE-080219-11]
21. si:ch211-137i24.12 ENSDARG00000094537 35 1.842 - - - - - - 0.842 1.000 - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
22. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 1.81 1.000 - - - - - - - 0.810 general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
23. rab11bb_1 ENSDARG00000090086 7 1.802 0.802 - - - - - 1.000 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
24. RBBP6 ENSDARG00000037919 3 1.753 0.753 - - 1.000 - - - - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
25. si:ch73-111m19.2 ENSDARG00000003077 43 1.741 - - - 0.741 - - 1.000 - - si:ch73-111m19.2 [Source:ZFIN;Acc:ZDB-GENE-130603-13]
26. ZNF337_16 ZNF337_16 22 1.722 0.865 - - - - - - - 0.857
27. ifitm5 ENSDARG00000105153 132 1.708 1.000 - - - - - - - 0.708 interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
28. si:ch73-299h12.9 ENSDARG00000104488 81 1 1.000 - - - - - - - - si:ch73-299h12.9 [Source:ZFIN;Acc:ZDB-GENE-081031-87]
29. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
30. ZC3H7B 2 1 - - - - - - - - 1.000 zinc finger CCCH-type containing 7B
31. si:dkey-193c22.1 ENSDARG00000093687 104 1 - - - - - - 1.000 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
32. chgb ENSDARG00000076500 42 1 1.000 - - - - - - - - chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]
33. bsx ENSDARG00000068976, ENSDARG00000110782 139 1 1.000 - - - - - - - - brain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]
34. SHANK1_1 SHANK1_1 0 1 - - - - - - 1.000 - -
35. myo10l1 ENSDARG00000074723 21 1 1.000 - - - - - - - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]
36. tmc4 ENSDARG00000031757 30 1 1.000 - - - - - - - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
37. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
38. CR933820.2 CR933820.2 152 1 1.000 - - - - - - - -
39. ENDOD1_7 ENDOD1_7 33 1 - - - - - - 1.000 - -
40. BX005103.2 BX005103.2 1 1 - - - - - - - - 1.000
41. fam196ab 2 1 - - - 1.000 - - - - - family with sequence similarity 196, member Ab
42. cd74b ENSDARG00000036628 8 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
43. si:ch211-209n20.58 si:ch211-209n20.58 1 1 - - - 1.000 - - - - -
44. tecrl2 tecrl2 11 1 - - - - - - 1.000 - -
45. si:dkey-11f4.20 ENSDARG00000100887 38 1 - - - 1.000 - - - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
46. scd ENSDARG00000033662 146 1 - - - - - - 1.000 - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
47. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
48. HIPK1 HIPK1 8 1 1.000 - - - - - - - -
49. si:dkey-121b10.8 si:dkey-121b10.8 3 1 - - - - - - 1.000 - -
50. si:dkeyp-8h3.9 si:dkeyp-8h3.9 3 1 - - - 1.000 - - - - -
51. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
52. mkks ENSDARG00000016139 70 1 - - - - - - 1.000 - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
53. prlrb ENSDARG00000045955 12 1 1.000 - - - - - - - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
54. ms4a17a.9 ENSDARG00000094854 933 1 1.000 - - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
55. ftr14l ENSDARG00000078254 2 1 - - - - - - 1.000 - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
56. si:dkey-222f2.7 ENSDARG00000071667 1 1 - - - - - - - - 1.000 si:dkey-222f2.7 [Source:ZFIN;Acc:ZDB-GENE-050208-727]
57. hrh3 ENSDARG00000035942 32 1 1.000 - - - - - - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
58. sf3b3 ENSDARG00000103553 57 1 - - - - - - 1.000 - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
59. LRRC41 LRRC41 11 1 1.000 - - - - - - - -
60. PSMB11 PSMB11 3 1 - - - 1.000 - - - - -
61. cdk5r1a ENSDARG00000037916 46 1 - - - - - - 1.000 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
62. ptx4 ENSDARG00000038072 2 1 - - - - - - - 1.000 - pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
63. CABZ01067072.1 CABZ01067072.1 17 1 - - - 1.000 - - - - -
64. myo1f ENSDARG00000078734 100 1 1.000 - - - - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
65. crabp1a ENSDARG00000045926 99 1 - - - - - - 1.000 - - cellular retinoic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-020320-3]
66. si:ch73-25i22.2 si:ch73-25i22.2 1 1 - - - - - - - - 1.000
67. opn1mw3 ENSDARG00000044279 1 1 - - - - - - - - 1.000 opsin 1 (cone pigments), medium-wave-sensitive, 3 [Source:ZFIN;Acc:ZDB-GENE-030728-6]
68. Mar-04 Mar-04 21 1 - - - - - - 1.000 - -
69. si:ch73-186j5.2 ENSDARG00000018301 12 1 - - - - - - - - 1.000 si:ch73-186j5.2 [Source:ZFIN;Acc:ZDB-GENE-070705-214]
70. exosc4 ENSDARG00000103432 21 1 1.000 - - - - - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
71. fbxl3b ENSDARG00000021882 58 1 - - - - - - 1.000 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
72. si:ch211-263p13.7 ENSDARG00000077622 2 1 - - - - - - 1.000 - - si:ch211-263p13.7 [Source:ZFIN;Acc:ZDB-GENE-091204-336]
73. zgc:158463_1 ENSDARG00000089382 23 1 - - - - - - 1.000 - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
74. si:ch211-214p16.2 ENSDARG00000094975 59 1 - - - - - - - - 1.000 si:ch211-214p16.2 [Source:NCBI gene;Acc:368902]
75. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
76. def6a ENSDARG00000012247 20 1 - - - - - - 1.000 - - differentially expressed in FDCP 6a homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1246]
77. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
78. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
79. adcyap1a ENSDARG00000004015 67 1 - - - - - - 1.000 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
80. msgn1 ENSDARG00000070546 188 1 1.000 - - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
81. si:ch73-62b13.1 ENSDARG00000093269 11 1 - - - - - - 1.000 - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
82. ush1g ush1g 0 1 - - - - - - 1.000 - -
83. hsf4 ENSDARG00000013251 5 1 - - - 1.000 - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
84. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 1.000 - - - - - - - -
85. CU571169.4 CU571169.4 12 1 - - - - - - 1.000 - -
86. C4H12orf39 C4H12orf39 73 1 1.000 - - - - - - - -
87. PROC PROC 11 1 1.000 - - - - - - - -
88. PACRG ENSDARG00000087556 7 1 - - - 1.000 - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
89. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 1 1.000 - - - - - - - -
90. ptprub_1 ENSDARG00000101081 0 1 - - - 1.000 - - - - - protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
91. GTF3A GTF3A 6 1 1.000 - - - - - - - -
92. cd74a ENSDARG00000009087 20 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
93. si:dkeyp-69c1.7 ENSDARG00000087165 31 1 - - - - - - 1.000 - - si:dkeyp-69c1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-69]
94. Mar-03 Mar-03 44 1 1.000 - - - - - - - -
95. zgc:173552 ENSDARG00000105345, ENSDARG00000110909, ENSDARG00000112175 0 1 - - - 1.000 - - - - - zgc:173552 [Source:ZFIN;Acc:ZDB-GENE-080220-24]
96. PCDH10_1 PCDH10_1 57 1 - - - - - - 1.000 - -
97. zgc:174268 ENSDARG00000076807 250 1 - - - - - - 1.000 - - zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
98. U8 U8 11 1 1.000 - - - - - - - -
99. KLF8 ENSDARG00000060661 219 1 - - - - - - 1.000 - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
100. wu:fb64b08 wu:fb64b08 8 1 1.000 - - - - - - - -

There are 1112 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA