Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-227h16.2

Gene Name Gene ID Reads Annotation
si:dkey-227h16.2 si:dkey-227h16.2 98










Genes with expression patterns similar to si:dkey-227h16.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-227h16.2 si:dkey-227h16.2 98 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. znf804a ENSDARG00000027079 121 1.665 - 0.828 - - - 0.837 - - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
3. CR293532.1 ENSDARG00000115628 204 1.655 - - - - - 0.759 0.896 - -
4. hmga1b ENSDARG00000070951 377 1.644 - 0.884 - - - 0.760 - - - high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
5. CELF3 CELF3 163 1.638 - 0.707 - - - - 0.931 - -
6. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.604 - - - - - 0.817 0.787 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
7. fgf12b ENSDARG00000113525 261 1.604 - 0.806 - - - 0.798 - - - fibroblast growth factor 12b [Source:ZFIN;Acc:ZDB-GENE-060825-134]
8. UBE2QL1 ENSDARG00000079276 3474 1.596 - - - - - 0.853 0.743 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
9. nfasca ENSDARG00000061099, ENSDARG00000109524 275 1.591 - 0.719 - - - 0.872 - - - neurofascin homolog (chicken) a [Source:ZFIN;Acc:ZDB-GENE-080229-6]
10. tmem179 ENSDARG00000013292 343 1.562 - 0.720 - - - 0.842 - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
11. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.554 - - - - - 0.788 0.766 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
12. cyb561 ENSDARG00000038176 55 1.548 - 0.828 - - - - - - 0.720 cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
13. cdkn2d ENSDARG00000094176 190 1.54 - 0.710 - - - 0.830 - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
14. myt1la ENSDARG00000008209 120 1.536 - - - - 0.750 0.786 - - - myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
15. rgs7bpa ENSDARG00000060601 138 1.511 - - - - - 0.767 0.744 - - regulator of G protein signaling 7 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060929-380]
16. si:ch211-222k6.2 ENSDARG00000087046 144 1.499 - - - - - 0.719 0.780 - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
17. FAM72B ENSDARG00000070621 501 1.498 - - - - - 0.703 0.795 - - family with sequence similarity 72 member B [Source:HGNC Symbol;Acc:HGNC:24805]
18. mllt1 mllt1 974 1.486 - - - - 0.708 0.778 - - -
19. si:ch211-255g12.7 si:ch211-255g12.7 44 1.484 0.755 0.729 - - - - - - -
20. si:dkey-28b4.8 ENSDARG00000002840 1277 1.48 - - - - - 0.758 0.722 - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
21. CAMKK2 CAMKK2 184 1.46 0.727 - - - - 0.733 - - -
22. BX088646.1 BX088646.1 34 0.972 - 0.972 - - - - - - -
23. pax6b ENSDARG00000045936 349 0.965 - - - - - 0.965 - - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
24. rab36 ENSDARG00000014058 70 0.961 - - - - - 0.961 - - - RAB36, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040910-5]
25. CU468905.1 CU468905.1 111 0.956 - - - - - - 0.956 - -
26. lgi1a ENSDARG00000020493 1218 0.956 - 0.956 - - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
27. mir124-2 196 0.956 - - - - - 0.956 - - - microRNA 124-2
28. alkbh8 ENSDARG00000060256 102 0.952 - 0.952 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-100922-251]
29. zgc:136791 97 0.949 - 0.949 - - - - - - - zgc:136791, transcript variant X3
30. si:dkey-7b17.1 si:dkey-7b17.1 101 0.949 - 0.949 - - - - - - -
31. pcdh2ac ENSDARG00000099783 325 0.948 - - - - - 0.948 - - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
32. rapgef5b ENSDARG00000074307 112 0.944 - - - - - 0.944 - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
33. kifap3b ENSDARG00000006862 613 0.943 - 0.943 - - - - - - - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
34. gpr186 ENSDARG00000094860 53 0.943 - - - - - 0.943 - - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
35. trim35-29 ENSDARG00000055730 24 0.941 - - - - 0.941 - - - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
36. sox19b ENSDARG00000040266 532 0.94 - - - - - 0.940 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
37. tox3 ENSDARG00000073957 3075 0.937 - - - - - - 0.937 - - TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
38. DNER ENSDARG00000061031 123 0.936 - - - - - 0.936 - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
39. st6galnac3 ENSDARG00000058473 131 0.933 - - - - - 0.933 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1329]
40. cux2b ENSDARG00000086345 519 0.932 - - - - - 0.932 - - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
41. si:ch211-81a5.8 ENSDARG00000070972 59 0.932 - - - - - 0.932 - - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
42. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 0.931 - - - - - 0.931 - - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
43. KCNJ10 KCNJ10 62 0.928 - - - - - - 0.928 - -
44. GADD45G GADD45G 382 0.927 - - - - - 0.927 - - -
45. gabrg2 ENSDARG00000053665 434 0.925 - - - - - 0.925 - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
46. CABZ01064972.1 ENSDARG00000098966 199 0.923 - 0.923 - - - - - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
47. wu:fd60c08 wu:fd60c08 35 0.923 - 0.923 - - - - - - -
48. chrna2b ENSDARG00000057025 217 0.919 - - - - - 0.919 - - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
49. si:ch211-10a23.2 ENSDARG00000060656 471 0.914 - - - - - 0.914 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
50. CACNA2D2 CACNA2D2 7 0.914 - - - - - 0.914 - - -
51. pnpla6 ENSDARG00000010773 510 0.912 - - - - - - 0.912 - - patatin-like phospholipase domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050107-4]
52. ube2r2 ENSDARG00000058740 83 0.91 - - - - - 0.910 - - - ubiquitin-conjugating enzyme E2R 2 [Source:ZFIN;Acc:ZDB-GENE-040718-344]
53. pcgf5a ENSDARG00000071007, ENSDARG00000113711, ENSDARG00000114273 22 0.91 - - - - - 0.910 - - - polycomb group ring finger 5a [Source:ZFIN;Acc:ZDB-GENE-080723-33]
54. KIF3A ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 95 0.91 - - - - - 0.910 - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
55. Metazoa_SRP_9 Metazoa_SRP_9 26 0.91 - - - - - 0.910 - - -
56. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 0.91 - - - - - 0.910 - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
57. C10H5orf63 C10H5orf63 17 0.91 - - - - - 0.910 - - -
58. cabp5a ENSDARG00000002576 14 0.91 - - - - - 0.910 - - - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
59. scg5 ENSDARG00000032126, ENSDARG00000077045 29 0.91 - - - - - 0.910 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
60. TRIM46 TRIM46 73 0.91 - - - - - 0.910 - - -
61. si:dkey-22l11.6 ENSDARG00000070126 27 0.91 - - - - - 0.910 - - - si:dkey-22l11.6 [Source:ZFIN;Acc:ZDB-GENE-041210-251]
62. CABZ01068819.1 CABZ01068819.1 20 0.91 - - - - - 0.910 - - -
63. CABZ01063077.1 CABZ01063077.1 22 0.91 - - - - - 0.910 - - -
64. mb21d2b mb21d2b 84 0.907 - - - - - 0.907 - - -
65. nefla ENSDARG00000057568 62 0.907 - - - - - 0.907 - - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
66. mamdc1 mamdc1 156 0.906 - 0.906 - - - - - - -
67. gria3a ENSDARG00000032737 429 0.905 - - - - - - 0.905 - - glutamate receptor, ionotropic, AMPA 3a [Source:ZFIN;Acc:ZDB-GENE-020125-5]
68. her4.3 ENSDARG00000070770 613 0.904 - - - - - 0.904 - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
69. SLC35F4 ENSDARG00000103124 55 0.904 - - - - - 0.904 - - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
70. CR974475.2 CR974475.2 38 0.904 - - - - - 0.904 - - -
71. PPP1R3E PPP1R3E 340 0.902 - - - - - 0.902 - - -
72. SPTBN4_1 ENSDARG00000092624 473 0.9 - - - - - 0.900 - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
73. dbx1a ENSDARG00000086393 3161 0.9 - - - - - 0.900 - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
74. si:ch211-247j9.1 ENSDARG00000079283 217 0.899 - - - - - 0.899 - - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
75. cdh7 582 0.899 - - - - - 0.899 - - - cadherin 7, type 2, transcript variant X1
76. sall3a ENSDARG00000079613 257 0.899 - - - - - - 0.899 - - spalt-like transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-020228-4]
77. zgc:113336 ENSDARG00000104078 147 0.898 - - - - - 0.898 - - - zgc:113336 [Source:ZFIN;Acc:ZDB-GENE-050320-55]
78. tmcc2 ENSDARG00000046007 148 0.896 - 0.896 - - - - - - - transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]
79. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 0.893 - - - - - 0.893 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
80. notch1a ENSDARG00000103554 498 0.892 - - - - - 0.892 - - - notch 1a [Source:ZFIN;Acc:ZDB-GENE-990415-173]
81. im:7162084 im:7162084 665 0.891 - - - - - 0.891 - - -
82. arhgap39 ENSDARG00000100007 344 0.89 - - - - - 0.890 - - - Rho GTPase activating protein 39 [Source:ZFIN;Acc:ZDB-GENE-041014-247]
83. GPR22 GPR22 33 0.89 - - - - - - 0.890 - -
84. fam43b ENSDARG00000070222 92 0.89 - - - - - 0.890 - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
85. ptprz1b ENSDARG00000020871 435 0.89 - - - - - 0.890 - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
86. plekhg7 ENSDARG00000062855 308 0.889 - 0.889 - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
87. khdrbs2 ENSDARG00000069469 160 0.887 - - - - - - 0.887 - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
88. ifi35 ENSDARG00000075643 62 0.884 - 0.884 - - - - - - - interferon-induced protein 35 [Source:ZFIN;Acc:ZDB-GENE-100311-2]
89. CRIP2 ENSDARG00000070670 323 0.884 - - - - - - 0.884 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
90. cdkl5 ENSDARG00000015240 68 0.884 - - - - - 0.884 - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
91. mir219-3 46 0.884 - - - - - 0.884 - - - microRNA 219-3
92. HAP1 HAP1 481 0.882 - - - - - 0.882 - - -
93. si:ch211-212k5.1 ENSDARG00000110637 337 0.882 - 0.882 - - - - - - - si:ch211-212k5.1 [Source:ZFIN;Acc:ZDB-GENE-110914-19]
94. gabrd ENSDARG00000059763 52 0.881 - - - - - 0.881 - - - gamma-aminobutyric acid (GABA) A receptor, delta [Source:ZFIN;Acc:ZDB-GENE-081105-170]
95. gphnb ENSDARG00000100851 118 0.88 - - - - - 0.880 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
96. zgc:174700_1 zgc:174700_1 60 0.878 - - - - 0.878 - - - -
97. KCNA1 KCNA1 268 0.877 - 0.877 - - - - - - -
98. SNORA5 SNORA5 72 0.877 - - - - - 0.877 - - -
99. si:dkey-24g18.3 si:dkey-24g18.3 60 0.877 - - - - - 0.877 - - -
100. TTBK1 TTBK1 120 0.876 - - - - - 0.876 - - -

There are 651 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA