Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-225n22.4

Gene Name Gene ID Reads Annotation
si:dkey-225n22.4 ENSDARG00000077245 86 si:dkey-225n22.4 [Source:ZFIN;Acc:ZDB-GENE-120709-30]










Genes with expression patterns similar to si:dkey-225n22.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-225n22.4 ENSDARG00000077245 86 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-225n22.4 [Source:ZFIN;Acc:ZDB-GENE-120709-30]
2. zgc:174573 ENSDARG00000079035 89 1.859 0.859 1.000 - - - - - - - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
3. SUN2 SUN2 86 1.59 - 0.860 0.730 - - - - - -
4. mir301c 84 1.472 - 0.713 - - - 0.759 - - - microRNA 301c
5. si:dkey-287f10.2 si:dkey-287f10.2 3 1.442 - 0.713 - - - 0.729 - - -
6. gdf11 ENSDARG00000044924 534 1 - 1.000 - - - - - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
7. SNORD88 SNORD88 232 1 - 1.000 - - - - - - -
8. EIF4G3 EIF4G3 24 1 - 1.000 - - - - - - -
9. si:ch211-149b19.4 ENSDARG00000095911 49 1 - 1.000 - - - - - - - si:ch211-149b19.4 [Source:ZFIN;Acc:ZDB-GENE-110411-90]
10. pgls ENSDARG00000021233 264 1 - 1.000 - - - - - - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
11. zgc:194659 ENSDARG00000079347 17 1 - 1.000 - - - - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
12. mthfd1a ENSDARG00000018266 286 1 - 1.000 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1a, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:ZFIN;Acc:ZDB-GENE-041001-127]
13. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 1 - 1.000 - - - - - - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
14. tbx6l 87 1 - 1.000 - - - - - - - T-box 6, like, transcript variant X2
15. myha ENSDARG00000095930 143 1 - 1.000 - - - - - - - myosin, heavy chain a [Source:ZFIN;Acc:ZDB-GENE-060531-50]
16. chico ENSDARG00000019588 77 1 - 1.000 - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
17. BAI1 BAI1 173 1 - 1.000 - - - - - - -
18. zswim7 ENSDARG00000067608 179 1 - 1.000 - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
19. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - 1.000 - - - - - - -
20. GPR180 73 1 - 1.000 - - - - - - - G protein-coupled receptor 180, transcript variant X2
21. INTS4 ENSDARG00000102953 38 1 - 1.000 - - - - - - - integrator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-120215-81]
22. cntnap5b ENSDARG00000075189 16 1 - 1.000 - - - - - - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
23. trpa1b ENSDARG00000031875 39 1 - 1.000 - - - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
24. cx45.6 cx45.6 26 1 - 1.000 - - - - - - -
25. lss ENSDARG00000061274 68 1 - 1.000 - - - - - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
26. stk19 ENSDARG00000086628 85 1 - 1.000 - - - - - - - serine/threonine kinase 19 [Source:ZFIN;Acc:ZDB-GENE-000616-11]
27. mdm1 ENSDARG00000045675 64 1 - 1.000 - - - - - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
28. zgc:113162 ENSDARG00000052923 62 1 - 1.000 - - - - - - - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
29. syt12 ENSDARG00000101776 215 1 - 1.000 - - - - - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
30. FAM69A FAM69A 28 1 - 1.000 - - - - - - -
31. rdh8b ENSDARG00000105060 183 1 - 1.000 - - - - - - - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
32. nudt18 ENSDARG00000041576 61 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
33. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.947 - 0.947 - - - - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
34. RPS11 ENSDARG00000053058 32 0.947 - 0.947 - - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
35. CABZ01019904.1 ENSDARG00000104193 6 0.947 - 0.947 - - - - - - -
36. cacnb4b ENSDARG00000062174 159 0.947 - 0.947 - - - - - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
37. ntrk2a ENSDARG00000059897 185 0.945 - 0.945 - - - - - - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
38. TMEM196 ENSDARG00000114159 80 0.942 - 0.942 - - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
39. hmx3 hmx3 510 0.942 - 0.942 - - - - - - -
40. npsn ENSDARG00000010423 768 0.942 - 0.942 - - - - - - - nephrosin [Source:ZFIN;Acc:ZDB-GENE-040420-2]
41. CRIP2 ENSDARG00000070670 323 0.942 - 0.942 - - - - - - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
42. SCN1B SCN1B 191 0.942 - 0.942 - - - - - - -
43. CU856539.1 ENSDARG00000010023 190 0.94 - 0.940 - - - - - - - hippocampus abundant transcript 1 protein-like [Source:NCBI gene;Acc:557306]
44. rab24 ENSDARG00000054032 126 0.94 - 0.940 - - - - - - - RAB24, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050706-110]
45. zgc:162576 zgc:162576 56 0.939 - 0.939 - - - - - - -
46. si:dkey-18p12.4 ENSDARG00000079703 21 0.909 0.909 - - - - - - - - si:dkey-18p12.4 [Source:ZFIN;Acc:ZDB-GENE-070912-408]
47. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 0.909 0.909 - - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
48. zgc:173713 17 0.909 0.909 - - - - - - - - zgc:173713, transcript variant X2
49. sigirr ENSDARG00000062204 52 0.904 - - - - - 0.904 - - - single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]
50. pih1d2 ENSDARG00000014849 389 0.897 0.897 - - - - - - - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
51. SASH1 SASH1 274 0.893 - 0.893 - - - - - - -
52. actr8 ENSDARG00000103610 367 0.891 - 0.891 - - - - - - - ARP8 actin related protein 8 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5065]
53. eps8l3 eps8l3 144 0.89 - - - - - 0.890 - - -
54. SPAG1 SPAG1 44 0.884 - 0.884 - - - - - - -
55. FAM78A FAM78A 61 0.88 0.880 - - - - - - - -
56. zgc:194470 zgc:194470 210 0.88 - 0.880 - - - - - - -
57. si:dkey-234d14.2 ENSDARG00000092275 30 0.875 - 0.875 - - - - - - - si:dkey-234d14.2 [Source:ZFIN;Acc:ZDB-GENE-100922-134]
58. rsph9 ENSDARG00000017355 144 0.873 0.873 - - - - - - - - radial spoke head 9 homolog [Source:ZFIN;Acc:ZDB-GENE-051120-129]
59. si:dkey-104n9.1 ENSDARG00000093042 41 0.864 0.864 - - - - - - - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
60. BX088525.2 ENSDARG00000117222 11 0.86 - 0.860 - - - - - - -
61. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 0.86 - 0.860 - - - - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
62. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 0.86 - 0.860 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
63. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 0.859 0.859 - - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
64. si:ch211-57i17.2 ENSDARG00000093354 58 0.859 0.859 - - - - - - - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
65. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 0.856 0.856 - - - - - - - - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
66. trdmt1 ENSDARG00000034518 169 0.855 - 0.855 - - - - - - - tRNA aspartic acid methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-041008-138]
67. si:ch73-103b9.2 ENSDARG00000092489 89 0.854 - 0.854 - - - - - - - si:ch73-103b9.2 [Source:ZFIN;Acc:ZDB-GENE-070705-199]
68. cftr ENSDARG00000041107, ENSDARG00000110312 56 0.852 0.852 - - - - - - - - cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:ZFIN;Acc:ZDB-GENE-050517-20]
69. acsl4l acsl4l 540 0.851 - - - - - - 0.851 - -
70. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.85 0.850 - - - - - - - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
71. rnf220b ENSDARG00000075183 53 0.849 0.849 - - - - - - - - ring finger protein 220b [Source:ZFIN;Acc:ZDB-GENE-081104-195]
72. zgc:162936 ENSDARG00000069957 95 0.847 - 0.847 - - - - - - - zgc:162936 [Source:ZFIN;Acc:ZDB-GENE-030131-5253]
73. hecw2a ENSDARG00000062447 132 0.841 - 0.841 - - - - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2a [Source:ZFIN;Acc:ZDB-GENE-090311-22]
74. dnajb13 ENSDARG00000043157 50 0.84 - - - - - 0.840 - - - DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
75. dnajc2 ENSDARG00000070477 902 0.839 - - - - - - 0.839 - - DnaJ (Hsp40) homolog, subfamily C, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1912]
76. si:dkey-23a23.2 ENSDARG00000023036 123 0.836 - 0.836 - - - - - - - si:dkey-23a23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-158]
77. MXRA5 MXRA5 58 0.834 - 0.834 - - - - - - -
78. zgc:174895 ENSDARG00000079416, ENSDARG00000113559 451 0.832 - 0.832 - - - - - - - zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]
79. mapk8a ENSDARG00000031888 44 0.83 - 0.830 - - - - - - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
80. si:ch211-198c19.2 si:ch211-198c19.2 165 0.83 0.830 - - - - - - - -
81. kcnk18 ENSDARG00000057049, ENSDARG00000110571, ENSDARG00000112385 118 0.825 - 0.825 - - - - - - - potassium channel, subfamily K, member 18 [Source:ZFIN;Acc:ZDB-GENE-100405-2]
82. si:dkey-241l7.10 si:dkey-241l7.10 38 0.824 - 0.824 - - - - - - -
83. BCL2 BCL2 122 0.824 - 0.824 - - - - - - -
84. trim35-36 trim35-36 19 0.824 - 0.824 - - - - - - -
85. serac1 ENSDARG00000056121, ENSDARG00000116580 196 0.824 - 0.824 - - - - - - - serine active site containing 1 [Source:ZFIN;Acc:ZDB-GENE-040616-1]
86. nr3c2 ENSDARG00000102082, ENSDARG00000115513 122 0.822 - - - - - 0.822 - - - nuclear receptor subfamily 3, group C, member 2 [Source:ZFIN;Acc:ZDB-GENE-060531-23]
87. CR759907.4 CR759907.4 14 0.822 0.822 - - - - - - - -
88. klhl26 ENSDARG00000053876 48 0.818 0.818 - - - - - - - - kelch-like family member 26 [Source:ZFIN;Acc:ZDB-GENE-030131-5975]
89. lipeb ENSDARG00000101145 184 0.818 - - - - - - 0.818 - - lipase, hormone-sensitive b [Source:ZFIN;Acc:ZDB-GENE-100921-71]
90. syt1a ENSDARG00000030614 542 0.818 - - - - - - 0.818 - - synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
91. lrrc23 ENSDARG00000006174 234 0.814 0.814 - - - - - - - - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
92. si:dkey-199f5.6 ENSDARG00000094400 51 0.81 - - 0.810 - - - - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
93. GALNT16 ENSDARG00000053190 250 0.809 - 0.809 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
94. ikbke ENSDARG00000070606, ENSDARG00000111682, ENSDARG00000111787 54 0.807 - - - - - - 0.807 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon [Source:ZFIN;Acc:ZDB-GENE-040718-251]
95. PURA PURA 172 0.804 - 0.804 - - - - - - -
96. CABZ01054965.1 ENSDARG00000090844 74 0.804 - - - - - 0.804 - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
97. faima ENSDARG00000005828 154 0.803 - 0.803 - - - - - - - Fas apoptotic inhibitory molecule a [Source:ZFIN;Acc:ZDB-GENE-040718-323]
98. si:dkey-30j22.1 ENSDARG00000042829 25 0.803 - 0.803 - - - - - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
99. poldip2 ENSDARG00000092305, ENSDARG00000112927, ENSDARG00000117099 88 0.803 - 0.803 - - - - - - - polymerase (DNA-directed), delta interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5881]
100. hsd17b7 ENSDARG00000088140 185 0.802 - 0.802 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]

There are 468 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA