Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-222o15.4

Gene Name Gene ID Reads Annotation
si:dkey-222o15.4 si:dkey-222o15.4 4










Genes with expression patterns similar to si:dkey-222o15.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-222o15.4 si:dkey-222o15.4 4 4 - - 1.000 1.000 1.000 - - - 1.000
2. slc8a1a ENSDARG00000013422 12 1.936 - - - - 0.981 - - - 0.955 solute carrier family 8 (sodium/calcium exchanger), member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-1]
3. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1.855 - - - - 1.000 - - - 0.855 suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
4. si:ch211-198c19.3 ENSDARG00000095533 5 1.827 - - - - 1.000 - - - 0.827 si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
5. CU104716.1 ENSDARG00000109332 12 1.825 - - - - 0.908 - - - 0.917
6. BX571823.1 BX571823.1 2 1.822 - - - 1.000 0.822 - - - -
7. CSMD1 CSMD1 15 1.715 - - - 0.838 0.877 - - - -
8. CABZ01064671.1 ENSDARG00000039935 21 1.613 - - - - 0.702 - - - 0.911
9. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1.607 - - - - 0.842 - - - 0.765 sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
10. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
11. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
12. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - 1.000 - - - -
13. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
14. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
15. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
16. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
17. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
18. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
19. CR381673.1 ENSDARG00000098337 7 1 - - - 1.000 - - - - -
20. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
21. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
22. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
23. F13A1 F13A1 1 1 - - - - 1.000 - - - -
24. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
25. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
26. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
27. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
28. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
29. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
30. hoxa4a 37 1 - - - 1.000 - - - - - homeobox A4a, transcript variant X4
31. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
32. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
33. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
34. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
35. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
36. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
37. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
38. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
39. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
40. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
41. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
42. U1_18 U1_18 0 1 - - - - 1.000 - - - -
43. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
44. vap ENSDARG00000093053, ENSDARG00000100949 6 1 - - - - - - - - 1.000 vascular associated protein [Source:ZFIN;Acc:ZDB-GENE-090313-42]
45. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
46. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
47. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
48. tnni1a ENSDARG00000000474 1 1 - - - 1.000 - - - - - troponin I type 1a (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-030616-266]
49. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
50. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
51. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
52. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
53. umodl1 ENSDARG00000068923 2 1 - - - 1.000 - - - - - uromodulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-140]
54. CST7 CST7 22 1 - - - - 1.000 - - - -
55. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - - 1.000 - - - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
56. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
57. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
58. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
59. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
60. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
61. XKR8 XKR8 9 1 - - - 1.000 - - - - -
62. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
63. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
64. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
65. zgc:136902 zgc:136902 4 1 - - - 1.000 - - - - -
66. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
67. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
68. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
69. CU467888.1 CU467888.1 30 1 - - - 1.000 - - - - -
70. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
71. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
72. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
73. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
74. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
75. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
76. BIN1 BIN1 11 1 - - - - 1.000 - - - -
77. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
78. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
79. c1qb ENSDARG00000044612 8 1 - - - 1.000 - - - - - complement component 1, q subcomponent, B chain [Source:ZFIN;Acc:ZDB-GENE-040801-223]
80. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
81. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
82. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
83. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
84. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
85. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
86. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
87. BRPF1 ENSDARG00000103665 10 1 - - - - 1.000 - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
88. sh2d1ab ENSDARG00000074854, ENSDARG00000115149 0 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate b [Source:ZFIN;Acc:ZDB-GENE-091204-326]
89. zgc:162872 ENSDARG00000012184 1 1 - - - - 1.000 - - - - zgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]
90. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
91. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
92. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
93. MOB2 MOB2 4 1 - - - - 1.000 - - - -
94. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
95. KBTBD13 ENSDARG00000076449 10 1 - - - 1.000 - - - - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
96. wibg wibg 2 1 - - - - 1.000 - - - -
97. CABZ01084323.1 ENSDARG00000104937 5 1 - - - 1.000 - - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
98. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
99. sgk494b ENSDARG00000086169 1 1 - - - 1.000 - - - - - uncharacterized serine/threonine-protein kinase SgK494b [Source:ZFIN;Acc:ZDB-GENE-120215-252]
100. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]

There are 296 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA