Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-222l20.1

Gene Name Gene ID Reads Annotation
si:dkey-222l20.1 si:dkey-222l20.1 375










Genes with expression patterns similar to si:dkey-222l20.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-222l20.1 si:dkey-222l20.1 375 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. wu:fi34b01 38 1.705 - 0.820 - - - - 0.885 - - wu:fi34b01
3. gas8 ENSDARG00000101431 140 1.685 - 0.805 - - - - 0.880 - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
4. dscama ENSDARG00000024865 75 1.685 - 0.831 - - - - 0.854 - - Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
5. leo1 ENSDARG00000055357 1644 1.54 - - - - - 0.729 0.811 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
6. thbs2b ENSDARG00000073810 870 1.525 - 0.722 - - - - 0.803 - - thrombospondin 2b [Source:ZFIN;Acc:ZDB-GENE-100623-1]
7. SORT1 SORT1 33 0.961 - 0.961 - - - - - - -
8. adh8a ENSDARG00000091211, ENSDARG00000113750 19 0.961 - 0.961 - - - - - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
9. si:ch73-338a16.3 ENSDARG00000101159 18 0.951 - 0.951 - - - - - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
10. isl1 ENSDARG00000004023 981 0.942 - 0.942 - - - - - - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
11. rasl12 ENSDARG00000002701 66 0.941 - - - - - - 0.941 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
12. CCDC34 CCDC34 313 0.94 - - - - - - 0.940 - -
13. dvl3a ENSDARG00000015707 1132 0.926 - - - - - - 0.926 - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
14. ak7a ENSDARG00000019001 71 0.925 - 0.925 - - - - - - - adenylate kinase 7a [Source:ZFIN;Acc:ZDB-GENE-040724-122]
15. arhgef12b ENSDARG00000100913 1358 0.922 - - - - - - 0.922 - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
16. gabra1 ENSDARG00000068989 581 0.921 - - - - - - 0.921 - - gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-061013-194]
17. dusp7 ENSDARG00000101413 1307 0.919 - - - - - - 0.919 - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
18. mlh1 ENSDARG00000025948 130 0.918 - - - - - - 0.918 - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
19. raver2 ENSDARG00000075034 290 0.918 - - - - - - 0.918 - - ribonucleoprotein, PTB-binding 2 [Source:ZFIN;Acc:ZDB-GENE-090713-1]
20. CABZ01079241.1 ENSDARG00000098424 88 0.918 - - - - - - 0.918 - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
21. HERC4 ENSDARG00000059936 369 0.916 - - - - - - 0.916 - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
22. hs3st3l ENSDARG00000059903 184 0.916 - - - - - - 0.916 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
23. ube2w ENSDARG00000044923 438 0.916 - - - - - - 0.916 - - ubiquitin-conjugating enzyme E2W (putative) [Source:ZFIN;Acc:ZDB-GENE-050506-94]
24. CCDC181 ENSDARG00000062021 77 0.916 - 0.916 - - - - - - - coiled-coil domain containing 181 [Source:ZFIN;Acc:ZDB-GENE-060503-312]
25. kcnh7 ENSDARG00000062687 172 0.914 - - - - - - 0.914 - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
26. nlgn4a 102 0.914 - - - - - - 0.914 - - neuroligin 4a, transcript variant X1
27. EDEM3 ENSDARG00000074129 805 0.914 - - - - - - 0.914 - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
28. cbln2a ENSDARG00000074601 12 0.914 - - - - - - 0.914 - - cerebellin 2a precursor [Source:ZFIN;Acc:ZDB-GENE-070912-591]
29. si:ch73-186j5.4 si:ch73-186j5.4 70 0.914 - - - - - - 0.914 - -
30. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 0.913 - - - - - - 0.913 - - potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]
31. sirt3 ENSDARG00000035819 101 0.913 - - - - - - 0.913 - - sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
32. fosb ENSDARG00000055751 170 0.912 - - - - - - 0.912 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
33. muc13b ENSDARG00000079647 67 0.91 - 0.910 - - - - - - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
34. cadpsa ENSDARG00000043661 160 0.91 - - - - - - 0.910 - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
35. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.91 - - - - - - 0.910 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
36. CDH8 172 0.908 - - - - - - 0.908 - - cadherin 8
37. DFNA5 DFNA5 201 0.908 - - - - - - 0.908 - -
38. scn3b ENSDARG00000062359 242 0.904 - - - - - - 0.904 - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
39. CABZ01112521.1 CABZ01112521.1 83 0.903 - - - - - - 0.903 - -
40. zbtb14 ENSDARG00000098273 36 0.902 - - - - - - 0.902 - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
41. eno1b ENSDARG00000013750 63 0.901 - - - - - - 0.901 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
42. PRRT4 ENSDARG00000088343 36 0.9 - - - - - - 0.900 - - proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
43. cntn1b ENSDARG00000045685 159 0.9 - - - - - - 0.900 - - contactin 1b [Source:ZFIN;Acc:ZDB-GENE-041210-236]
44. si:ch211-113e8.11 ENSDARG00000076585 721 0.899 - - - - - - 0.899 - - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
45. AP5B1 ENSDARG00000078805 62 0.898 - - - - - - 0.898 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
46. dgat1b ENSDARG00000054914 119 0.897 - - - - - - 0.897 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
47. mrap ENSDARG00000091992 9 0.897 - - - - - - 0.897 - - melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
48. has2 ENSDARG00000036987 349 0.897 - - - - - - 0.897 - - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
49. AL954676.2 AL954676.2 50 0.896 - - - - - - 0.896 - -
50. swt1 ENSDARG00000094010 472 0.896 - - - - - - 0.896 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
51. hspa12a ENSDARG00000070603 1474 0.895 - - - - - - 0.895 - - heat shock protein 12A [Source:ZFIN;Acc:ZDB-GENE-031001-1]
52. WDR48 WDR48 448 0.894 - - - - - - 0.894 - -
53. cbln13 ENSDARG00000026904, ENSDARG00000114505 93 0.894 - - - - - - 0.894 - - cerebellin 13 [Source:ZFIN;Acc:ZDB-GENE-070912-288]
54. SHF SHF 92 0.894 - - - - - - 0.894 - -
55. CU658147.1 CU658147.1 69 0.892 - 0.892 - - - - - - -
56. si:ch211-218c6.9 si:ch211-218c6.9 40 0.892 - - - - - - 0.892 - -
57. AL929092.1 ENSDARG00000092217 50 0.892 - - - - - - 0.892 - -
58. TMEM55B TMEM55B 76 0.891 - - - - - - 0.891 - -
59. lrrc24 ENSDARG00000101704 224 0.89 - - - - - - 0.890 - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
60. CU570684.5 CU570684.5 55 0.888 - - - - - - 0.888 - -
61. irs1 ENSDARG00000054087 1809 0.888 - - - - - - 0.888 - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
62. si:ch211-113a14.14_2 si:ch211-113a14.14_2 156 0.888 - - - - - - 0.888 - -
63. celf4 ENSDARG00000070045 1537 0.887 - 0.887 - - - - - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
64. si:dkey-169i5.4 ENSDARG00000077862 511 0.887 - - - - - - 0.887 - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
65. cyp27a1.4 ENSDARG00000055159 47 0.887 - - - - - - 0.887 - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
66. map7d2a ENSDARG00000068480 513 0.886 - 0.886 - - - - - - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
67. PRKCA_1 ENSDARG00000099841 12 0.885 - - - - - - 0.885 - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
68. lppr5b lppr5b 23 0.885 - - - - - - 0.885 - -
69. CABZ01054405.1 CABZ01054405.1 115 0.885 - - - - - - 0.885 - -
70. dlx6a ENSDARG00000042291 185 0.885 - - - - - - 0.885 - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
71. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 0.885 - - - - - - 0.885 - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
72. HEATR2 HEATR2 6 0.885 - - - - - - 0.885 - -
73. BX324215.3 BX324215.3 12 0.885 - - - - - - 0.885 - -
74. si:dkeyp-100a1.6 ENSDARG00000092141 33 0.885 - - - - - - 0.885 - - si:dkeyp-100a1.6 [Source:ZFIN;Acc:ZDB-GENE-081104-448]
75. FP085412.2 FP085412.2 5 0.885 - - - - - - 0.885 - -
76. pla1a ENSDARG00000102176, ENSDARG00000109274 29 0.885 - - - - - - 0.885 - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
77. C24H7orf10 C24H7orf10 7 0.885 - - - - - - 0.885 - -
78. dapp1 ENSDARG00000039535 23 0.885 - - - - - - 0.885 - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
79. ins ENSDARG00000035350, ENSDARG00000116735 317 0.885 - - - - - - 0.885 - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
80. BX936303.1 ENSDARG00000103105 26 0.885 - - - - - - 0.885 - -
81. rad51c ENSDARG00000068919 98 0.885 - - - - - - 0.885 - - RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204]
82. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.885 - - - - - - 0.885 - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
83. HIST1H4J HIST1H4J 31 0.885 - - - - - - 0.885 - -
84. CR396586.2 CR396586.2 103 0.884 - 0.884 - - - - - - -
85. ECEL1 ENSDARG00000060549 62 0.884 - - - - - - 0.884 - - endothelin converting enzyme-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-692]
86. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 0.884 - - - - - - 0.884 - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
87. hydin ENSDARG00000056764, ENSDARG00000114934 16 0.883 - 0.883 - - - - - - - HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219]
88. si:zfos-364h11.1 99 0.883 - - - - - - 0.883 - - si:zfos-364h11.1, transcript variant X4
89. agmo ENSDARG00000025595 42 0.883 - - - - - - 0.883 - - alkylglycerol monooxygenase [Source:ZFIN;Acc:ZDB-GENE-040426-2207]
90. CU019652.1 CU019652.1 665 0.883 - 0.883 - - - - - - -
91. NMNAT3 ENSDARG00000077034 126 0.883 - - - - - - 0.883 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
92. mapk4 ENSDARG00000017681, ENSDARG00000110581 303 0.882 - - - - - - 0.882 - - mitogen-activated protein kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2835]
93. FHOD3 FHOD3 422 0.882 - - - - - - 0.882 - -
94. pigm ENSDARG00000024277 86 0.882 - - - - - - 0.882 - - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
95. otx5 ENSDARG00000043483 282 0.882 - - - - - - 0.882 - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
96. egln3 ENSDARG00000032553 280 0.881 - - - - - - 0.881 - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
97. gfm2 ENSDARG00000005561 302 0.88 - - - - - - 0.880 - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
98. usp33 ENSDARG00000016163 651 0.88 - - - - - - 0.880 - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
99. zgc:114046 ENSDARG00000091728 68 0.879 - - - - - - 0.879 - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
100. si:ch211-89o9.6 ENSDARG00000075639 382 0.879 - - - - - - 0.879 - - si:ch211-89o9.6 [Source:ZFIN;Acc:ZDB-GENE-030131-7155]

There are 570 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA