Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-220a11.9

Gene Name Gene ID Reads Annotation
si:dkey-220a11.9 si:dkey-220a11.9 10










Genes with expression patterns similar to si:dkey-220a11.9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-220a11.9 si:dkey-220a11.9 10 5 - 1.000 1.000 - 1.000 1.000 - 1.000 -
2. gltpb ENSDARG00000077962 5 1.996 - 1.000 - - 0.996 - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
3. si:ch211-122l14.7 ENSDARG00000095576 5 1.984 - 1.000 - - 0.984 - - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
4. CLDN20 26 1.98 - 1.000 - - 0.980 - - - - claudin 20, transcript variant X2
5. vrtn ENSDARG00000061963, ENSDARG00000115943 42 1.933 - 1.000 - - - - - 0.933 - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
6. sst2 ENSDARG00000014190 617 1.927 - 1.000 - - 0.927 - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
7. vav3b ENSDARG00000073713, ENSDARG00000075962 26 1.836 - - 0.914 - - - - 0.922 - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
8. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.796 - 1.000 - - 0.796 - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
9. AL935186.3 ENSDARG00000109223 19 1.795 - 1.000 - - 0.795 - - - -
10. krt15 ENSDARG00000036840, ENSDARG00000111896 580 1.738 - 1.000 - - 0.738 - - - - keratin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-2931]
11. NPPC_1 NPPC_1 11 1.733 - 0.881 - - 0.852 - - - -
12. tacr3l ENSDARG00000003054 10 1.715 - - - - 0.926 0.789 - - - tachykinin receptor 3-like [Source:ZFIN;Acc:ZDB-GENE-061207-19]
13. snrnp35 ENSDARG00000099913 21 1.704 - 0.704 - - - 1.000 - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
14. BX323793.3 BX323793.3 7 1.681 - - 0.930 - 0.751 - - - -
15. CT573256.1 ENSDARG00000091657 18 1.668 - - 0.760 - - - - 0.908 - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
16. rgs7 rgs7 208 1.654 - 0.946 - - - - - 0.708 -
17. TNNC2 ENSDARG00000070835, ENSDARG00000111155 89 1.638 - - - - - 0.712 - 0.926 - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
18. spon2b ENSDARG00000002732 115 1.597 - 0.806 - - - - - 0.791 - spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
19. dtnbb ENSDARG00000013020 280 1.481 - 0.756 - - - - - 0.725 - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
20. lingo1a ENSDARG00000034165 179 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
21. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
22. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1 - 1.000 - - - - - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
23. slc17a6b ENSDARG00000041150 823 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
24. fam163b ENSDARG00000073914 46 1 - 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
25. ftr15 122 1 - - - - - 1.000 - - - finTRIM family, member 15
26. ENSDARG00000088231 ENSDARG00000088231 0 1 - 1.000 - - - - - - -
27. CABZ01066439.2 CABZ01066439.2 5 1 - 1.000 - - - - - - -
28. si:ch211-141e20.2 ENSDARG00000093349 61 1 - 1.000 - - - - - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
29. lmx1a ENSDARG00000020354 111 1 - 1.000 - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
30. zgc:113307 ENSDARG00000044894 17 1 - 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
31. B2M ENSDARG00000053136 2 1 - - - - 1.000 - - - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
32. ABCA7 ABCA7 12 1 - 1.000 - - - - - - -
33. mthfd2l ENSDARG00000054199 25 1 - 1.000 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-5707]
34. si:dkey-49o11.1 0 1 - 1.000 - - - - - - - si:dkey-49o11.1
35. GRIK3 ENSDARG00000077715 178 1 - 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
36. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - 1.000 - - - - - - -
37. DKK3 DKK3 12 1 - 1.000 - - - - - - -
38. tmigd1 ENSDARG00000007040 19 1 - 1.000 - - - - - - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
39. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
40. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
41. arl11l arl11l 31 1 - 1.000 - - - - - - -
42. nebl ENSDARG00000021200 40 1 - 1.000 - - - - - - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
43. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - 1.000 - - - - - - -
44. gfra3 ENSDARG00000087704 122 1 - 1.000 - - - - - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
45. nfixa ENSDARG00000043226 14 1 - 1.000 - - - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
46. si:dkey-43b14.8 35 1 - 1.000 - - - - - - - si:dkey-43b14.8
47. TMEM74 26 1 - 1.000 - - - - - - - transmembrane protein 74, transcript variant X3
48. slc26a6l ENSDARG00000054127 8 1 - 1.000 - - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
49. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1 - 1.000 - - - - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
50. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - 1.000 - - - - - - -
51. mir184 48 1 - 1.000 - - - - - - - microRNA 184
52. cobl ENSDARG00000091006 4 1 - 1.000 - - - - - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
53. yjefn3 ENSDARG00000061692 211 1 - 1.000 - - - - - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
54. si:dkey-13d5.1 si:dkey-13d5.1 3 1 - 1.000 - - - - - - -
55. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1 - 1.000 - - - - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
56. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
57. si:ch211-214p16.1 ENSDARG00000044129 64 1 - 1.000 - - - - - - - si:ch211-214p16.1 [Source:NCBI gene;Acc:368901]
58. TRPC4_1 TRPC4_1 212 1 - 1.000 - - - - - - -
59. taar16f ENSDARG00000116273 0 1 - 1.000 - - - - - - - trace amine associated receptor 16f [Source:ZFIN;Acc:ZDB-GENE-060413-20]
60. hoxc9a ENSDARG00000092809 18 1 - 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
61. cnga3b ENSDARG00000012297 2 1 - 1.000 - - - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
62. csf3r ENSDARG00000045959 4 1 - - - - - 1.000 - - - colony stimulating factor 3 receptor (granulocyte) [Source:ZFIN;Acc:ZDB-GENE-080104-4]
63. hspbap1 ENSDARG00000033771 41 1 - 1.000 - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
64. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - 1.000 - - - - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
65. sirt7 ENSDARG00000060645 1 1 - 1.000 - - - - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
66. si:ch211-195h23.4 ENSDARG00000093337 1 1 - 1.000 - - - - - - - si:ch211-195h23.4 [Source:ZFIN;Acc:ZDB-GENE-070912-175]
67. mfsd4a mfsd4a 179 1 - 1.000 - - - - - - -
68. ttc6 ENSDARG00000104125 7 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
69. bdnf ENSDARG00000018817 193 1 - 1.000 - - - - - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
70. morc3b ENSDARG00000043271 8 1 - 1.000 - - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
71. hspb15 ENSDARG00000078411 6 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b15 [Source:ZFIN;Acc:ZDB-GENE-080214-5]
72. spata20 ENSDARG00000013880 46 1 - 1.000 - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
73. sdhaf1 ENSDARG00000092478 51 1 - 1.000 - - - - - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
74. GJD2_1 GJD2_1 3045 1 - 1.000 - - - - - - -
75. si:ch211-198c19.1 ENSDARG00000089333 3 1 - 1.000 - - - - - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
76. CABZ01086828.1 CABZ01086828.1 1 1 - 1.000 - - - - - - -
77. C10H5orf63 C10H5orf63 17 1 - 1.000 - - - - - - -
78. xkr8.2 ENSDARG00000076820 51 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
79. neflb ENSDARG00000012426 298 1 - 1.000 - - - - - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
80. si:dkeyp-79c2.1 42 1 - 1.000 - - - - - - - si:dkeyp-79c2.1, transcript variant X2
81. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - 1.000 - - - - - - -
82. BX572078.1 ENSDARG00000099083 1 1 - 1.000 - - - - - - -
83. U6_23 U6_23 0 1 - 1.000 - - - - - - -
84. sc:d136 sc:d136 2 1 - 1.000 - - - - - - -
85. FAM184A ENSDARG00000014081 34 1 - 1.000 - - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
86. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 1 - 1.000 - - - - - - - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
87. sox17 ENSDARG00000101717 11 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
88. TESPA1 ENSDARG00000053311 29 1 - 1.000 - - - - - - - thymocyte expressed, positive selection associated 1 [Source:ZFIN;Acc:ZDB-GENE-120727-10]
89. AGAP2 ENSDARG00000099874 151 1 - 1.000 - - - - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:ZFIN;Acc:ZDB-GENE-061103-343]
90. CABZ01041769.1 CABZ01041769.1 17 1 - 1.000 - - - - - - -
91. KCNG2 ENSDARG00000035961 58 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
92. PHYH ENSDARG00000086740 15 1 - 1.000 - - - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
93. CR388095.2 ENSDARG00000117604 76 1 - 1.000 - - - - - - -
94. C14HXorf65 C14HXorf65 49 1 - 1.000 - - - - - - -
95. zgc:113210 ENSDARG00000002872 99 1 - 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
96. tmem44 ENSDARG00000068193 8 1 - 1.000 - - - - - - - transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
97. cdk20 ENSDARG00000003867 27 1 - 1.000 - - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
98. col28a1 col28a1 5 1 - 1.000 - - - - - - -
99. ankrd37 ENSDARG00000056376 131 1 - 1.000 - - - - - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
100. st8sia1_1 ENSDARG00000098221 16 1 - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]

There are 778 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA