Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-20j3.4

Gene Name Gene ID Reads Annotation
si:dkey-20j3.4 si:dkey-20j3.4 4










Genes with expression patterns similar to si:dkey-20j3.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-20j3.4 si:dkey-20j3.4 4 4 - - - - 1.000 1.000 - 1.000 1.000
2. CABZ01117474.1 CABZ01117474.1 2 2 - - - - 1.000 1.000 - - -
3. fgf23 ENSDARG00000045854 2 2 - - - - 1.000 - - 1.000 - fibroblast growth factor 23 [Source:ZFIN;Acc:ZDB-GENE-050201-4]
4. ptger2a ENSDARG00000011434 6 2 - - - - 1.000 1.000 - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
5. CU655870.1 ENSDARG00000101035 1 1.99 - - - - 1.000 - - - 0.990
6. CR848664.1 CR848664.1 12 1.958 - - - - 1.000 - - - 0.958
7. si:dkey-78a14.5 14 1.929 - - - - - 0.939 - - 0.990 si:dkey-78a14.5, transcript variant X2
8. si:dkey-106c17.1 si:dkey-106c17.1 26 1.888 - - - - - 1.000 - 0.888 -
9. muc13b ENSDARG00000079647 67 1.853 - - - - - 1.000 - 0.853 - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
10. anks4b ENSDARG00000036846 8 1.722 - - - - 1.000 0.722 - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
11. zgc:162235 zgc:162235 9 1.705 - - - - 1.000 0.705 - - -
12. mir124-1 10 1.679 - - - - - - - 0.762 0.917 microRNA 124-1
13. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - - - - - 1.000 - - -
14. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
15. ALOX5_1 ALOX5_1 0 1 - - - - 1.000 - - - -
16. fndc7 fndc7 3 1 - - - - - 1.000 - - -
17. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 1 - - - - - 1.000 - - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
18. tmem174 ENSDARG00000035388 2 1 - - - - 1.000 - - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
19. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - - - 1.000 - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
20. CU929449.1 CU929449.1 1 1 - - - - - 1.000 - - -
21. FP102191.1 FP102191.1 21 1 - - - - - 1.000 - - -
22. CABZ01085394.1 CABZ01085394.1 0 1 - - - - 1.000 - - - -
23. SNORD83 SNORD83 43 1 - - - - 1.000 - - - -
24. cnga3b ENSDARG00000012297 2 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
25. AL954173.3 AL954173.3 1 1 - - - - - 1.000 - - -
26. pi15b ENSDARG00000061292 1 1 - - - - 1.000 - - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
27. BX088718.1 ENSDARG00000101847 3 1 - - - - 1.000 - - - -
28. zgc:152857 ENSDARG00000041034 7 1 - - - - - 1.000 - - - zgc:152857 [Source:ZFIN;Acc:ZDB-GENE-060929-72]
29. cx45.6 cx45.6 26 1 - - - - - 1.000 - - -
30. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - 1.000 - - - -
31. si:ch211-113a14.29 48 1 - - - - - 1.000 - - - si:ch211-113a14.29
32. SNORD15_1 SNORD15_1 1 1 - - - - 1.000 - - - -
33. si:dkeyp-41f9.3 ENSDARG00000075600 2 1 - - - - - 1.000 - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
34. or111-11 ENSDARG00000041019 5 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
35. men1_1 ENSDARG00000089456 3 1 - - - - 1.000 - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
36. otx1a 1607 1 - - - - - 1.000 - - - orthodenticle homeobox 1a
37. trim62 ENSDARG00000060901 12 1 - - - - 1.000 - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
38. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 - - - - 1.000 - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
39. nfil3-4 ENSDARG00000092346 3 1 - - - - 1.000 - - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
40. ARHGEF40 ENSDARG00000078979 25 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
41. SGPP2 ENSDARG00000079608 1 1 - - - - 1.000 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
42. BX323793.1 ENSDARG00000104134 24 1 - - - - - 1.000 - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
43. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - 1.000 - - - -
44. si:dkey-222h21.9 ENSDARG00000093975 2 1 - - - - - - - 1.000 - si:dkey-222h21.9 [Source:ZFIN;Acc:ZDB-GENE-081031-10]
45. CR382281.1 ENSDARG00000100098 135 1 - - - - 1.000 - - - -
46. nitr7b_1 ENSDARG00000067977 1 1 - - - - - 1.000 - - - novel immune-type receptor 7b [Source:ZFIN;Acc:ZDB-GENE-041001-8]
47. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - 1.000 - - - -
48. SLC25A22_1 SLC25A22_1 3 1 - - - - 1.000 - - - -
49. si:dkeyp-87a6.2 ENSDARG00000093322 18 1 - - - - - 1.000 - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
50. CABZ01081748.1 ENSDARG00000102139 31 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
51. cd247l ENSDARG00000077240 25 1 - - - - - 1.000 - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
52. si:dkey-14o18.2 ENSDARG00000062995 1 1 - - - - - 1.000 - - - si:dkey-14o18.2 [Source:ZFIN;Acc:ZDB-GENE-060503-145]
53. shank3a ENSDARG00000063332 5 1 - - - - 1.000 - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
54. si:dkey-15h8.1 si:dkey-15h8.1 17 1 - - - - - 1.000 - - -
55. phox2bb ENSDARG00000091029 2 1 - - - - 1.000 - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
56. BX323796.1 BX323796.1 2 1 - - - - 1.000 - - - -
57. si:dkey-11d18.2 0 1 - - - - 1.000 - - - - si:dkey-11d18.2
58. BX927369.1 ENSDARG00000105047 21 1 - - - - - 1.000 - - -
59. atg9b ENSDARG00000055292 155 1 - - - - - 1.000 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
60. rspo3 ENSDARG00000070081 4 1 - - - - - 1.000 - - - R-spondin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9814]
61. si:dkey-9i23.8 ENSDARG00000095407 1 1 - - - - - 1.000 - - - si:dkey-9i23.8 [Source:ZFIN;Acc:ZDB-GENE-090313-367]
62. st3gal1l ENSDARG00000079310 10 1 - - - - 1.000 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
63. MPP3 MPP3 13 1 - - - - - 1.000 - - -
64. BX005472.1 BX005472.1 2 1 - - - - - 1.000 - - -
65. BAI2 BAI2 0 1 - - - - 1.000 - - - -
66. kiss1 ENSDARG00000075829 4 1 - - - - 1.000 - - - - KiSS-1 metastasis suppressor [Source:ZFIN;Acc:ZDB-GENE-080128-1]
67. CU929052.1 CU929052.1 642 1 - - - - - 1.000 - - -
68. CT737190.3 CT737190.3 0 1 - - - - 1.000 - - - -
69. zgc:172051 ENSDARG00000086569 12 1 - - - - - 1.000 - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
70. DNAJC11 1 1 - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C11
71. fabp10a ENSDARG00000038439 4 1 - - - - 1.000 - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
72. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1 - - - - - 1.000 - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
73. ENDOD1_6 ENDOD1_6 2 1 - - - - - 1.000 - - -
74. si:rp71-18l21.1 si:rp71-18l21.1 2 1 - - - - 1.000 - - - -
75. si:ch211-260c23.1 13 1 - - - - - - - 1.000 - si:ch211-260c23.1, transcript variant X7
76. si:dkey-14o1.18 si:dkey-14o1.18 23 1 - - - - - 1.000 - - -
77. ctssa ctssa 24 1 - - - - - 1.000 - - -
78. si:dkey-6a5.3 ENSDARG00000094001 0 1 - - - - 1.000 - - - - si:dkey-6a5.3 [Source:ZFIN;Acc:ZDB-GENE-041210-128]
79. ucn3l ENSDARG00000087241 29 1 - - - - - 1.000 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
80. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - 1.000 - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
81. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - - - - 1.000 - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
82. BX897720.4 BX897720.4 0 1 - - - - 1.000 - - - -
83. BX000363.2 ENSDARG00000109527 1 1 - - - - - 1.000 - - -
84. PTCHD2 PTCHD2 2 1 - - - - 1.000 - - - -
85. si:dkeyp-33e11.1 6 1 - - - - 1.000 - - - - si:dkeyp-33e11.1, transcript variant X3
86. STK31 ENSDARG00000056339 37 1 - - - - - 1.000 - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
87. unc13ba ENSDARG00000017391 1 1 - - - - - 1.000 - - - unc-13 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-100921-10]
88. BX469910.2 ENSDARG00000096127 6 1 - - - - 1.000 - - - -
89. grifin ENSDARG00000033382 141 1 - - - - - 1.000 - - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
90. CABZ01073085.1 CABZ01073085.1 1 1 - - - - 1.000 - - - -
91. lgsn ENSDARG00000007715 8 1 - - - - 1.000 - - - - lengsin, lens protein with glutamine synthetase domain [Source:ZFIN;Acc:ZDB-GENE-060312-26]
92. ZNF70_5 ZNF70_5 25 1 - - - - 1.000 - - - -
93. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - 1.000 - - - -
94. si:dkey-71h2.4 si:dkey-71h2.4 6 1 - - - - - 1.000 - - -
95. zgc:173708 zgc:173708 2 1 - - - - 1.000 - - - -
96. EDN3 14 1 - - - - 1.000 - - - - endothelin 3
97. cabp2a ENSDARG00000052016 19 1 - - - - - 1.000 - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
98. zgc:175107 ENSDARG00000075417 39 1 - - - - 1.000 - - - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
99. rhpn1 ENSDARG00000052454 3 1 - - - - 1.000 - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
100. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - - - - - 1.000 - - -

There are 505 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA