Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-20j3.4

Gene Name Gene ID Reads Annotation
si:dkey-20j3.4 si:dkey-20j3.4 4










Genes with expression patterns similar to si:dkey-20j3.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-20j3.4 si:dkey-20j3.4 4 4 - - - - 1.000 1.000 - 1.000 1.000
2. ptger2a ENSDARG00000011434 6 2 - - - - 1.000 1.000 - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
3. CABZ01117474.1 CABZ01117474.1 2 2 - - - - 1.000 1.000 - - -
4. fgf23 ENSDARG00000045854 2 2 - - - - 1.000 - - 1.000 - fibroblast growth factor 23 [Source:ZFIN;Acc:ZDB-GENE-050201-4]
5. CU655870.1 ENSDARG00000101035 1 1.99 - - - - 1.000 - - - 0.990
6. CR848664.1 CR848664.1 12 1.958 - - - - 1.000 - - - 0.958
7. si:dkey-78a14.5 14 1.929 - - - - - 0.939 - - 0.990 si:dkey-78a14.5, transcript variant X2
8. si:dkey-106c17.1 si:dkey-106c17.1 26 1.888 - - - - - 1.000 - 0.888 -
9. muc13b ENSDARG00000079647 67 1.853 - - - - - 1.000 - 0.853 - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
10. anks4b ENSDARG00000036846 8 1.722 - - - - 1.000 0.722 - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
11. zgc:162235 zgc:162235 9 1.705 - - - - 1.000 0.705 - - -
12. mir124-1 10 1.679 - - - - - - - 0.762 0.917 microRNA 124-1
13. fgf20b ENSDARG00000086070 13 1 - - - - - 1.000 - - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
14. c6ast3 ENSDARG00000024503 2 1 - - - - 1.000 - - - - six-cysteine containing astacin protease 3 [Source:ZFIN;Acc:ZDB-GENE-050320-99]
15. zp3b ENSDARG00000039828 15 1 - - - - 1.000 - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
16. CR356247.1 CR356247.1 2 1 - - - - 1.000 - - - -
17. tcf3a ENSDARG00000005915 12 1 - - - - 1.000 - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
18. crfb4 ENSDARG00000068711 51 1 - - - - - 1.000 - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
19. LRRC30 LRRC30 83 1 - - - - - 1.000 - - -
20. si:dkey-111i23.1 ENSDARG00000094811 1 1 - - - - 1.000 - - - - si:dkey-111i23.1 [Source:ZFIN;Acc:ZDB-GENE-070912-351]
21. olfcd1 ENSDARG00000008095 2 1 - - - - - - - 1.000 - olfactory receptor C family, d1 [Source:ZFIN;Acc:ZDB-GENE-100721-9]
22. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - - - - 1.000 - - -
23. ccdc14 ENSDARG00000098734 3 1 - - - - 1.000 - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
24. chpfb ENSDARG00000078037 30 1 - - - - - 1.000 - - - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
25. si:ch211-30g3.6 si:ch211-30g3.6 1 1 - - - - - 1.000 - - -
26. gucy2f ENSDARG00000025504 6 1 - - - - - 1.000 - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
27. AFAP1L1 AFAP1L1 1 1 - - - - 1.000 - - - -
28. CU571315.2 ENSDARG00000101956 15 1 - - - - - 1.000 - - -
29. dusp19 dusp19 0 1 - - - - 1.000 - - - -
30. TTC34 ENSDARG00000091221 3 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
31. mc3r ENSDARG00000021369, ENSDARG00000112200 2 1 - - - - - - - 1.000 - melanocortin 3 receptor [Source:ZFIN;Acc:ZDB-GENE-030502-3]
32. lim2.2 ENSDARG00000059015 11 1 - - - - 1.000 - - - - lens intrinsic membrane protein 2.2 [Source:ZFIN;Acc:ZDB-GENE-060124-1]
33. C17orf105 C17orf105 1 1 - - - - 1.000 - - - -
34. CU695221.1 CU695221.1 1 1 - - - - - 1.000 - - -
35. mir144 0 1 - - - - 1.000 - - - - microRNA 144
36. si:ch211-226h7.6 ENSDARG00000076196 1 1 - - - - - 1.000 - - - si:ch211-226h7.6 [Source:ZFIN;Acc:ZDB-GENE-130531-12]
37. si:dkey-14d8.19 si:dkey-14d8.19 12 1 - - - - 1.000 - - - -
38. hhat ENSDARG00000074428 8 1 - - - - 1.000 - - - - hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
39. sts ENSDARG00000053241 10 1 - - - - - 1.000 - - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
40. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - 1.000 - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
41. PKDCC PKDCC 14 1 - - - - - 1.000 - - -
42. CU694951.3 CU694951.3 0 1 - - - - 1.000 - - - -
43. ZNF135_2 ZNF135_2 27 1 - - - - 1.000 - - - -
44. nif3l1 ENSDARG00000045249 28 1 - - - - - 1.000 - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
45. ENSDARG00000032477 ENSDARG00000032477 18 1 - - - - - 1.000 - - -
46. MCOLN2 ENSDARG00000098918 12 1 - - - - - 1.000 - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
47. OCEL1 OCEL1 27 1 - - - - - 1.000 - - -
48. si:dkey-19h16.7 si:dkey-19h16.7 0 1 - - - - 1.000 - - - -
49. zgc:162239 ENSDARG00000019651 2 1 - - - - - - - 1.000 - zgc:162239 [Source:ZFIN;Acc:ZDB-GENE-070424-28]
50. CU570691.1 ENSDARG00000088908 5 1 - - - - 1.000 - - - -
51. si:ch211-281k12.1 si:ch211-281k12.1 1 1 - - - - 1.000 - - - -
52. si:dkey-65l23.1 2 1 - - - - 1.000 - - - - si:dkey-65l23.1
53. si:ch211-212b13.1 si:ch211-212b13.1 1 1 - - - - - 1.000 - - -
54. CABZ01071909.3 CABZ01071909.3 14 1 - - - - - 1.000 - - -
55. CABZ01078314.1 CABZ01078314.1 44 1 - - - - - 1.000 - - -
56. PDE1C PDE1C 1 1 - - - - 1.000 - - - -
57. trip4 ENSDARG00000098074 79 1 - - - - - 1.000 - - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
58. ZPLD1 ZPLD1 1 1 - - - - - 1.000 - - -
59. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - 1.000 - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
60. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - 1.000 - - - -
61. si:ch211-153j24.3 ENSDARG00000068428 0 1 - - - - 1.000 - - - - si:ch211-153j24.3 [Source:ZFIN;Acc:ZDB-GENE-041014-38]
62. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - 1.000 - - -
63. CU469532.1 CU469532.1 31 1 - - - - - 1.000 - - -
64. CDH24_1 CDH24_1 7 1 - - - - - 1.000 - - -
65. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - - - 1.000 - - - -
66. btr20 ENSDARG00000102992 4 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
67. ppid_1 ENSDARG00000038835 4 1 - - - - 1.000 - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
68. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 - - - - - 1.000 - - -
69. NARS2 ENSDARG00000098441 57 1 - - - - - 1.000 - - - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
70. myo7bb ENSDARG00000077201 7 1 - - - - 1.000 - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
71. si:dkeyp-123a12.1 si:dkeyp-123a12.1 1 1 - - - - 1.000 - - - -
72. irg1 22 1 - - - - - 1.000 - - - immunoresponsive 1 homolog (mouse)
73. taar14f ENSDARG00000088859, ENSDARG00000114926 1 1 - - - - - 1.000 - - - trace amine associated receptor 14f [Source:ZFIN;Acc:ZDB-GENE-041210-313]
74. si:ch211-260m19.8 si:ch211-260m19.8 33 1 - - - - - 1.000 - - -
75. BICD2_1 BICD2_1 18 1 - - - - - 1.000 - - -
76. BX323819.1 BX323819.1 9 1 - - - - - 1.000 - - -
77. 5S_rRNA_30 5S_rRNA_30 0 1 - - - - 1.000 - - - -
78. si:ch211-102g22.3 si:ch211-102g22.3 2 1 - - - - - 1.000 - - -
79. MYO7B MYO7B 8 1 - - - - 1.000 - - - -
80. bicc2_1 ENSDARG00000076557 6 1 - - - - - - - 1.000 - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
81. rhol ENSDARG00000070666 0 1 - - - - 1.000 - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
82. si:ch211-222d3.3 si:ch211-222d3.3 2 1 - - - - - - - 1.000 -
83. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 1 - - - - - 1.000 - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
84. DTWD2 ENSDARG00000101873 1 1 - - - - 1.000 - - - - DTW domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120215-183]
85. BX927308.3 BX927308.3 126 1 - - - - - 1.000 - - -
86. WASF1 ENSDARG00000060349 1 1 - - - - 1.000 - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
87. v2ra17 ENSDARG00000056180 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, a17 [Source:ZFIN;Acc:ZDB-GENE-050419-130]
88. gzmk ENSDARG00000028780 1 1 - - - - 1.000 - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
89. svopa ENSDARG00000056833 14 1 - - - - 1.000 - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
90. AL845295.2 ENSDARG00000096472 0 1 - - - - 1.000 - - - -
91. glulc ENSDARG00000013227 6 1 - - - - - 1.000 - - - glutamate-ammonia ligase (glutamine synthase) c [Source:ZFIN;Acc:ZDB-GENE-060929-540]
92. cacna1bb ENSDARG00000079295, ENSDARG00000116562 1 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4]
93. agt ENSDARG00000016412 17 1 - - - - 1.000 - - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
94. SPP2 ENSDARG00000095590 5 1 - - - - - 1.000 - - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
95. CU694320.1 CU694320.1 6 1 - - - - 1.000 - - - -
96. arl8 ENSDARG00000094709 6 1 - - - - 1.000 - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
97. si:ch211-222f23.6 ENSDARG00000042880 3 1 - - - - - - - 1.000 - si:ch211-222f23.6 [Source:ZFIN;Acc:ZDB-GENE-070912-208]
98. BX005356.2 BX005356.2 2 1 - - - - 1.000 - - - -
99. BX004816.1 ENSDARG00000040497 0 1 - - - - 1.000 - - - - GTPase IMAP family member 4-like [Source:NCBI gene;Acc:571124]
100. si:ch211-251p5.3 si:ch211-251p5.3 39 1 - - - - 1.000 - - - -

There are 505 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA