Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-208k4.7

Gene Name Gene ID Reads Annotation
si:dkey-208k4.7 si:dkey-208k4.7 14










Genes with expression patterns similar to si:dkey-208k4.7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-208k4.7 si:dkey-208k4.7 14 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000
2. CU694254.1 CU694254.1 4 2 - - - - - 1.000 - 1.000 -
3. DTX4_1 ENSDARG00000076302 31 1.894 - 0.894 - - - 1.000 - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
4. CABZ01088346.1 ENSDARG00000099362 30 1.894 1.000 0.894 - - - - - - -
5. soul5l ENSDARG00000089879 20 1.894 - 0.894 - - - 1.000 - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
6. SYNGAP1 SYNGAP1 4 1.894 - 0.894 - - - - - 1.000 -
7. gc3 31 1.835 - 0.894 - - - - - - 0.941 guanylyl cyclase 3, transcript variant X2
8. CU457819.3 ENSDARG00000105418 23 1.83 - 0.830 - - - 1.000 - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
9. RP1 ENSDARG00000077687 6 1.829 - - - - - - - 1.000 0.829 retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
10. C3AR1 18 1.765 - 0.894 - - - - - 0.871 - C3a anaphylatoxin chemotactic receptor
11. si:ch211-141e20.6 si:ch211-141e20.6 25 1.761 - - 0.761 - - 1.000 - - -
12. si:ch211-229i14.2 ENSDARG00000086048 19 1.724 - - 0.792 - - - - - 0.932 si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
13. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1.712 0.818 0.894 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
14. BX927122.3 BX927122.3 19 1.706 - - 0.706 - - - - 1.000 -
15. spc24 ENSDARG00000093622 9 1.694 - 0.894 - - - - - 0.800 - SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-456]
16. vcpip1 ENSDARG00000060177 56 1.68 - 0.866 - - - - 0.814 - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
17. PPP2R2B PPP2R2B 257 1.631 - 0.894 - - - - 0.737 - -
18. zgc:112294 ENSDARG00000010602 23 1.631 - 0.894 - - - 0.737 - - - zgc:112294 [Source:ZFIN;Acc:ZDB-GENE-050522-418]
19. slc8a4a ENSDARG00000055154 90 1.611 - 0.894 - - - - 0.717 - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
20. pdcd2 ENSDARG00000007892 223 1.61 0.818 - 0.792 - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
21. tmprss15 ENSDARG00000079393 25 1.609 0.715 0.894 - - - - - - - transmembrane serine protease 15 [Source:ZFIN;Acc:ZDB-GENE-091204-83]
22. si:ch211-15j21.2 si:ch211-15j21.2 13 1.607 - - - - - 0.856 0.751 - -
23. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 1.602 0.818 0.784 - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
24. zgc:194551 ENSDARG00000114948, ENSDARG00000115221 24 1.587 - - 0.700 - - - - - 0.887 zgc:194551 [Source:ZFIN;Acc:ZDB-GENE-030131-4878]
25. CRELD1 794 1.585 - - - 0.700 - 0.885 - - - cysteine rich with EGF like domains 1
26. TTC17 ENSDARG00000044812 124 1.583 - 0.848 - - - - 0.735 - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
27. si:ch73-167f18.4 si:ch73-167f18.4 9 1.557 - 0.780 - - - - 0.777 - -
28. TRIM35 TRIM35 100 1.551 0.818 - - - - - 0.733 - -
29. FRRS1L ENSDARG00000103940 224 1.547 - 0.750 - - - - 0.797 - - ferric-chelate reductase 1-like [Source:ZFIN;Acc:ZDB-GENE-120827-1]
30. CABZ01026370.1 CABZ01026370.1 286 1.544 0.720 - - - - 0.824 - - -
31. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 1.521 0.818 - - - - - 0.703 - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
32. asic2 ENSDARG00000006849 18 1.514 - - - - - 0.737 0.777 - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
33. U4atac U4atac 47 1.47 0.749 - - - - - - - 0.721
34. BX572619.3 BX572619.3 154 1.439 0.714 0.725 - - - - - - -
35. ZNF608 3 1 - - - - - 1.000 - - - zinc finger protein 608, transcript variant X2
36. eif4e1b ENSDARG00000014565 12 1 - - - - - 1.000 - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
37. apnl ENSDARG00000090900 21 1 - - - - - 1.000 - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
38. si:dkey-287i17.6 si:dkey-287i17.6 0 1 - - - - - - - 1.000 -
39. CU896563.2 CU896563.2 2 1 - - - - - - - 1.000 -
40. pak1_1 ENSDARG00000103959 28 1 - - - - - - - 1.000 - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
41. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - - 1.000 - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
42. si:dkey-26g8.11 si:dkey-26g8.11 4 1 - - - - - 1.000 - - -
43. crfb16 ENSDARG00000075181 40 1 - - - - - 1.000 - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
44. IGFN1_2 IGFN1_2 3 1 - - - - - - - 1.000 -
45. sult1st6 ENSDARG00000006811 31 1 - - - - - 1.000 - - - sulfotransferase family 1, cytosolic sulfotransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040718-343]
46. hormad1 ENSDARG00000040254 12 1 - - - - - 1.000 - - - HORMA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-49]
47. or111-4 ENSDARG00000088846 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 4 [Source:ZFIN;Acc:ZDB-GENE-010308-16]
48. BMP10 ENSDARG00000061769 3 1 - - - - - - - 1.000 - bone morphogenetic protein 10 [Source:ZFIN;Acc:ZDB-GENE-060526-211]
49. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - - - - 1.000 - - -
50. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - - - - 1.000 - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
51. CU694952.2 CU694952.2 3 1 - - - - - 1.000 - - -
52. pgpep1l ENSDARG00000041092 0 1 - - - - - - - 1.000 - pyroglutamyl-peptidase I like [Source:ZFIN;Acc:ZDB-GENE-050419-171]
53. ipp ENSDARG00000075339 3 1 - - - - - 1.000 - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
54. ME1 ENSDARG00000053215 8 1 - - - - - 1.000 - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
55. ncf2 ENSDARG00000005821 28 1 - - - - - - - 1.000 - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
56. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - 1.000 - - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
57. zgc:194275 ENSDARG00000074014 130 1 - - - - - 1.000 - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
58. si:ch73-285p12.4 ENSDARG00000054548 1 1 - - - - - 1.000 - - - si:ch73-285p12.4 [Source:ZFIN;Acc:ZDB-GENE-110411-145]
59. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - 1.000 - - - - - - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
60. FNDC3B FNDC3B 2 1 - - - - - 1.000 - - -
61. sox32 ENSDARG00000100591 2 1 - - - - - 1.000 - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
62. HIST2H4A HIST2H4A 33 1 - - - - - 1.000 - - -
63. pdcb ENSDARG00000017634 10 1 - - - - - - - 1.000 - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
64. ctc1 ENSDARG00000070119 8 1 - - - - - 1.000 - - - CTS telomere maintenance complex component 1 [Source:ZFIN;Acc:ZDB-GENE-061103-271]
65. cx41.8 cx41.8 7 1 - - - - - 1.000 - - -
66. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 1 - - - - - 1.000 - - -
67. eef1a2 ENSDARG00000006838, ENSDARG00000111569 2 1 - - - - - - - 1.000 - eukaryotic translation elongation factor 1 alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040718-64]
68. ftr59 ENSDARG00000095864, ENSDARG00000116989 25 1 1.000 - - - - - - - - finTRIM family, member 59 [Source:ZFIN;Acc:ZDB-GENE-090508-4]
69. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - 1.000 - - -
70. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 - - - - - 1.000 - - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
71. CHCHD5 ENSDARG00000091754 35 1 - - - - - 1.000 - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
72. isg15 ENSDARG00000086374 8 1 - - - - - - - 1.000 - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
73. smtlb ENSDARG00000017251 7 1 - - - - - - - 1.000 - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
74. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 1 - - - - - 1.000 - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
75. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - - - - - - 1.000 -
76. oxtrl ENSDARG00000044175 10 1 - - - - - - - 1.000 - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
77. CR384085.1 ENSDARG00000068742 1 1 - - - - - 1.000 - - - uncharacterized LOC100151089 [Source:NCBI gene;Acc:100151089]
78. admp ENSDARG00000025372 1 1 - - - - - - - 1.000 - anti-dorsalizing morphogenic protein [Source:ZFIN;Acc:ZDB-GENE-011214-1]
79. FGFBP1 FGFBP1 7 1 - - - - - - - 1.000 -
80. rprmb ENSDARG00000024006 120 1 - - - - - 1.000 - - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
81. TAPBP TAPBP 1 1 - - - - - 1.000 - - -
82. upp2 ENSDARG00000036833 1 1 - - - - - 1.000 - - - uridine phosphorylase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-830]
83. gltpb ENSDARG00000077962 5 1 - - - - - - - 1.000 - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
84. ADAMTS15_1 ADAMTS15_1 11 1 - - - - - 1.000 - - -
85. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - - 1.000 - - -
86. RNF14_1 RNF14_1 1 1 - 1.000 - - - - - - -
87. ENSDARG00000078787 ENSDARG00000078787 97 1 - - - - - - - 1.000 -
88. irx4a ENSDARG00000035648 71 1 - - - - - 1.000 - - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
89. BX908386.1 ENSDARG00000098316 0 1 - - - - - - - 1.000 - sterile alpha motif domain-containing protein 3-like [Source:NCBI gene;Acc:110438099]
90. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - 1.000 - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
91. casd1 ENSDARG00000023900 12 1 - - - - - 1.000 - - - CAS1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-329]
92. si:ch211-226f6.1 ENSDARG00000094038 1 1 - - - - - - - 1.000 - si:ch211-226f6.1 [Source:ZFIN;Acc:ZDB-GENE-070912-217]
93. frzb ENSDARG00000018383 93 1 - 1.000 - - - - - - - frizzled related protein [Source:ZFIN;Acc:ZDB-GENE-990715-1]
94. si:ch211-286b5.2 ENSDARG00000096514 6 1 - - - - - 1.000 - - - si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
95. SLC22A13 SLC22A13 1 1 - - - - - 1.000 - - -
96. myo15ab ENSDARG00000078474 0 1 - - - - - - - 1.000 - myosin XVAb [Source:ZFIN;Acc:ZDB-GENE-090312-149]
97. CABZ01061914.2 CABZ01061914.2 2 1 - - - - - 1.000 - - -
98. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 1 - - - - - - 1.000 - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
99. scpp5 ENSDARG00000078622 15 1 - - - - - - - 1.000 - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
100. ATP6V1C2 ENSDARG00000070440 2 1 - - - - - - - 1.000 - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]

There are 984 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA