Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-208k4.10

Gene Name Gene ID Reads Annotation
si:dkey-208k4.10 si:dkey-208k4.10 1










Genes with expression patterns similar to si:dkey-208k4.10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-208k4.10 si:dkey-208k4.10 1 3 - - - - 1.000 1.000 - - 1.000
2. SNORA23 SNORA23 1 2 - - - - - 1.000 - - 1.000
3. or112-1 ENSDARG00000077211 2 2 - - - - - 1.000 - - 1.000 odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
4. si:ch211-196c10.5 si:ch211-196c10.5 3 1.943 - - - - 0.943 1.000 - - -
5. asic4a ENSDARG00000025162 25 1.753 - - - - 0.753 1.000 - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
6. rrh ENSDARG00000039534 4 1.753 - - - - 0.753 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
7. FAM13C FAM13C 1 1.753 - - - - 0.753 1.000 - - -
8. nid2b ENSDARG00000009471 4 1.753 - - - - 0.753 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
9. CR388231.2 ENSDARG00000105547 25 1.521 - - - - - 0.749 - - 0.772 uncharacterized LOC101883418 [Source:NCBI gene;Acc:101883418]
10. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1 - - - - - 1.000 - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
11. grin2cb ENSDARG00000077560 9 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
12. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - 1.000 - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
13. slc2a11l ENSDARG00000062873 1 1 - - - - - 1.000 - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
14. igf1 ENSDARG00000094132 59 1 - - - - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
15. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - 1.000 - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
16. CUL9 2 1 - - - - - - - - 1.000 cullin 9
17. zgc:171759_2 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 48 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
18. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - - - - - - - - 1.000
19. caps2 ENSDARG00000058486 4 1 - - - - 1.000 - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
20. ENDOD1_3 ENDOD1_3 9 1 - - - - - 1.000 - - -
21. zgc:113030 ENSDARG00000069869 53 1 - - - - - 1.000 - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
22. tceanc2 ENSDARG00000062919 32 1 - - - - - 1.000 - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
23. si:ch211-122i22.6 si:ch211-122i22.6 1 1 - - - - - - - - 1.000
24. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
25. grpr ENSDARG00000056620 66 1 - - - - - 1.000 - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
26. C3H19orf66 C3H19orf66 20 1 - - - - - 1.000 - - -
27. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
28. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
29. zgc:55621 ENSDARG00000010782 3 1 - - - - - - - - 1.000 zgc:55621 [Source:ZFIN;Acc:ZDB-GENE-040426-762]
30. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - 1.000 - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
31. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
32. gyg2 ENSDARG00000033380 12 1 - - - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
33. st8sia1 ENSDARG00000098221 34 1 - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
34. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
35. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - - 1.000 - - -
36. GABRA3 ENSDARG00000090883 5 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
37. zgc:136678 zgc:136678 2 1 - - - - - 1.000 - - -
38. si:dkey-246g23.4 ENSDARG00000013775 0 1 - - - - - - - - 1.000 si:dkey-246g23.4 [Source:ZFIN;Acc:ZDB-GENE-050419-234]
39. ampd2 ampd2 6 1 - - - - - - - - 1.000
40. si:ch211-171b20.3 ENSDARG00000094794 2 1 - - - - 1.000 - - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
41. si:dkey-24c2.6 si:dkey-24c2.6 1 1 - - - - - 1.000 - - -
42. CABZ01012885.1 ENSDARG00000100377 0 1 - - - - - 1.000 - - - extracellular calcium-sensing receptor-like [Source:NCBI gene;Acc:100007225]
43. si:ch211-255g12.5 si:ch211-255g12.5 7 1 - - - - - - - - 1.000
44. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - 1.000 - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
45. si:ch211-119c24.2 si:ch211-119c24.2 0 1 - - - - - - - - 1.000
46. nitr3a_1 ENSDARG00000110676 44 1 - - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
47. inha ENSDARG00000052433, ENSDARG00000116262 6 1 - - - - - - - - 1.000 inhibin subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060503-554]
48. sh2d4b sh2d4b 1 1 - - - - - 1.000 - - -
49. si:ch73-226l13.2 ENSDARG00000095939 0 1 - - - - - 1.000 - - - si:ch73-226l13.2 [Source:ZFIN;Acc:ZDB-GENE-110411-18]
50. samd10b ENSDARG00000094377 18 1 - - - - - 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
51. FP085391.3 FP085391.3 14 1 - - - - - 1.000 - - -
52. si:ch211-260c23.1 13 1 - - - - - 1.000 - - - si:ch211-260c23.1, transcript variant X7
53. PLA2G4C PLA2G4C 0 1 - - - - - - - - 1.000
54. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
55. cdk19 ENSDARG00000043858, ENSDARG00000114957 0 1 - - - - - - - - 1.000 cyclin-dependent kinase 19 [Source:ZFIN;Acc:ZDB-GENE-040724-19]
56. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - 1.000 - - -
57. BX548000.1 ENSDARG00000099044 45 1 - - - - - 1.000 - - -
58. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - - - - 1.000 - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
59. si:ch211-241e1.4 si:ch211-241e1.4 0 1 - - - - - - - - 1.000
60. IGFN1_2 IGFN1_2 3 1 - - - - - 1.000 - - -
61. rxfp1 ENSDARG00000090071 6 1 - - - - - 1.000 - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
62. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - - - 1.000 monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
63. tipin ENSDARG00000036136, ENSDARG00000110772 3 1 - - - - - - - - 1.000 timeless interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-189]
64. htr1aa ENSDARG00000093745 0 1 - - - - - 1.000 - - - 5-hydroxytryptamine (serotonin) receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-071203-1]
65. si:dkey-23a23.1 ENSDARG00000094824 1 1 - - - - - 1.000 - - - si:dkey-23a23.1 [Source:ZFIN;Acc:ZDB-GENE-060503-65]
66. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - - - 1.000 - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
67. si:dkey-162b3.5 si:dkey-162b3.5 24 1 - - - - - 1.000 - - -
68. KCNK17 ENSDARG00000105453 16 1 - - - - - - - - 1.000 potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
69. CR339051.1 CR339051.1 9 1 - - - - - 1.000 - - -
70. slc6a1l ENSDARG00000041205 1 1 - - - - - - - - 1.000 solute carrier family 6 (neurotransmitter transporter, GABA), member 1, like [Source:ZFIN;Acc:ZDB-GENE-041210-296]
71. zbbx ENSDARG00000069723 6 1 - - - - - - - - 1.000 zinc finger, B-box domain containing [Source:ZFIN;Acc:ZDB-GENE-061207-76]
72. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - - - 1.000 - - -
73. CMA1_9 CMA1_9 1 1 - - - - - 1.000 - - -
74. BX322608.1 ENSDARG00000111690 326 1 - - - - - 1.000 - - -
75. zgc:175284 ENSDARG00000078159 29 1 - - - - - 1.000 - - - zgc:175284 [Source:ZFIN;Acc:ZDB-GENE-080219-49]
76. or103-5 ENSDARG00000075128 1 1 - - - - - - - - 1.000 odorant receptor, family C, subfamily 103, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-52]
77. nr4a2a ENSDARG00000017007 140 1 - - - - - 1.000 - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
78. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
79. n6amt2 7 1 - - - - 1.000 - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
80. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1 - - - - - 1.000 - - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
81. FP236810.3 FP236810.3 1 1 - - - - - 1.000 - - -
82. polg ENSDARG00000060951 33 1 - - - - - 1.000 - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
83. ZP2_2 ZP2_2 28 1 - - - - - 1.000 - - -
84. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 1 - - - - - 1.000 - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
85. C24H8orf34 C24H8orf34 1 1 - - - - - 1.000 - - -
86. RNF14_3 RNF14_3 15 1 - - - - - 1.000 - - -
87. si:ch211-262l19.1 si:ch211-262l19.1 0 1 - - - - - 1.000 - - -
88. zgc:153846 ENSDARG00000040738 1 1 - - - - - 1.000 - - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
89. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 - - - - - 1.000 - - -
90. si:dkey-259p7.1 si:dkey-259p7.1 59 1 - - - - - 1.000 - - -
91. r3hdm4 ENSDARG00000063254 201 1 - - - - - 1.000 - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
92. DMXL2 ENSDARG00000091293 3 1 - - - - - 1.000 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
93. si:ch73-373m9.1 si:ch73-373m9.1 0 1 - - - - - - - - 1.000
94. panx2 ENSDARG00000063019 3 1 - - - - - - - - 1.000 pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
95. ptprda 1 1 - - - - - - - - 1.000 protein tyrosine phosphatase, receptor type, D, a
96. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
97. BX000981.1 ENSDARG00000092940 1 1 - - - - - 1.000 - - -
98. si:ch211-113a14.26_3 6 1 - - - - - - - - 1.000 si:ch211-113a14.26
99. gig2p ENSDARG00000088260 5 1 - - - - - - - - 1.000 grass carp reovirus (GCRV)-induced gene 2p [Source:ZFIN;Acc:ZDB-GENE-070705-490]
100. or115-15 ENSDARG00000079294 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 15 [Source:ZFIN;Acc:ZDB-GENE-990415-189]

There are 585 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA