Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-204f11.49p

Gene Name Gene ID Reads Annotation
si:dkey-204f11.49p si:dkey-204f11.49p 97










Genes with expression patterns similar to si:dkey-204f11.49p

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-204f11.49p si:dkey-204f11.49p 97 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000
2. rx3 ENSDARG00000052893 43 2.673 1.000 0.847 - - - - 0.826 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
3. C25HXorf38_1 C25HXorf38_1 35 2.496 1.000 0.777 - - - - 0.719 - -
4. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.961 1.000 0.961 - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
5. zfpm2a ENSDARG00000040123 46 1.961 1.000 0.961 - - - - - - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
6. slc24a1 ENSDARG00000041431 33 1.877 1.000 - - - - - 0.877 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
7. CR942805.3 CR942805.3 7 1.826 1.000 - - - - - 0.826 - -
8. si:ch211-202m22.1 ENSDARG00000094491 24 1.826 1.000 - - - - - 0.826 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
9. trpc2 trpc2 10 1.826 1.000 - - - - - 0.826 - -
10. pnp4b ENSDARG00000029230 6 1.826 1.000 - - - - - 0.826 - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
11. si:ch211-26b3.4 ENSDARG00000075491 50 1.809 1.000 0.809 - - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
12. shisa9 shisa9 35 1.809 1.000 0.809 - - - - - - -
13. si:dkey-242e21.3 ENSDARG00000075723 77 1.791 - 0.961 - - - - 0.830 - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
14. PACRG ENSDARG00000087556 7 1.75 - 0.920 - - - - 0.830 - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
15. BX664721.1 ENSDARG00000051804 21 1.702 1.000 - - - - - 0.702 - -
16. si:dkey-16j24.1 2 1.635 - 0.809 - - - - 0.826 - - si:dkey-16j24.1, transcript variant X1
17. GBF1 ENSDARG00000027016 30 1.635 - 0.809 - - - - 0.826 - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
18. efemp2b ENSDARG00000020811 116 1.604 - - - 0.778 - - 0.826 - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
19. zgc:171422 ENSDARG00000104715 255 1.597 0.744 - - 0.853 - - - - - zgc:171422 [Source:ZFIN;Acc:ZDB-GENE-080204-95]
20. myb ENSDARG00000053666, ENSDARG00000114024 58 1.574 0.852 0.722 - - - - - - - v-myb avian myeloblastosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-991110-14]
21. det1 ENSDARG00000098247 250 1.563 - - - 0.782 - - 0.781 - - DET1, COP1 ubiquitin ligase partner [Source:ZFIN;Acc:ZDB-GENE-030131-2809]
22. NETO2_1 NETO2_1 15 1.555 - 0.809 - - - - 0.746 - -
23. tbx16 ENSDARG00000007329 255 1.536 - - - 0.820 - - 0.716 - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
24. ttc12 ENSDARG00000056896 97 1.531 - - 0.780 - - - 0.751 - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
25. BX324003.1 ENSDARG00000096499 50 1.514 0.758 0.756 - - - - - - -
26. si:ch211-158c3.1 si:ch211-158c3.1 37 1.504 - - 0.704 - - - 0.800 - -
27. vps13d ENSDARG00000017986 183 1.499 - 0.722 - 0.777 - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
28. si:dkey-104k17.1 si:dkey-104k17.1 13 1.496 0.749 - - - - - 0.747 - -
29. LRRC8A LRRC8A 406 1.455 - - - 0.736 - - 0.719 - -
30. CCDC87 ENSDARG00000045683 27 1.455 - - - - - - 0.748 0.707 - coiled-coil domain containing 87 [Source:ZFIN;Acc:ZDB-GENE-041210-118]
31. ubn1 ENSDARG00000063169, ENSDARG00000115275 32 1.448 0.732 - - - - - 0.716 - - ubinuclein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-28]
32. si:ch211-14a17.6 ENSDARG00000054313, ENSDARG00000116347 12 1.447 - 0.707 - - - - - 0.740 - si:ch211-14a17.6 [Source:ZFIN;Acc:ZDB-GENE-030616-589]
33. cacnb2a ENSDARG00000099045 374 1.426 - 0.710 - - - - 0.716 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
34. ggcta ENSDARG00000076406 33 1 1.000 - - - - - - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
35. CABZ01090303.1 CABZ01090303.1 2 1 1.000 - - - - - - - -
36. celsr2l celsr2l 1 1 1.000 - - - - - - - -
37. fto ENSDARG00000044216 33 1 - 1.000 - - - - - - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
38. SLITRK4 ENSDARG00000079781 54 1 1.000 - - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
39. BX323793.1 ENSDARG00000104134 24 1 - 1.000 - - - - - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
40. cnn1a ENSDARG00000017193 6 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
41. zgc:195633_1 142 1 1.000 - - - - - - - - zgc:195633
42. si:dkey-89j23.3 si:dkey-89j23.3 9 1 1.000 - - - - - - - -
43. megf11 ENSDARG00000062686 230 1 1.000 - - - - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
44. TRIM14_10 TRIM14_10 9 1 1.000 - - - - - - - -
45. apex2 ENSDARG00000008472 39 1 - 1.000 - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
46. ankrd39 ENSDARG00000041350 73 1 1.000 - - - - - - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
47. lingo3a ENSDARG00000061970 234 1 1.000 - - - - - - - - leucine rich repeat and Ig domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-060503-54]
48. exoc4 ENSDARG00000004336 32 1 1.000 - - - - - - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
49. NFATC4 ENSDARG00000054162 44 1 1.000 - - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
50. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 1.000 - - - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
51. mir124-1 10 1 1.000 - - - - - - - - microRNA 124-1
52. ddr2b ENSDARG00000058695 7 1 1.000 - - - - - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
53. CABZ01086354.1_1 CABZ01086354.1_1 89 1 1.000 - - - - - - - -
54. vsx2 ENSDARG00000005574 102 1 1.000 - - - - - - - - visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
55. WIPI1 ENSDARG00000040657 138 1 1.000 - - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
56. gas5 279 1 1.000 - - - - - - - - growth arrest-specific 5, transcript variant X4
57. si:ch211-225b11.4 ENSDARG00000093563 42 1 1.000 - - - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
58. U3_10 U3_10 1 1 1.000 - - - - - - - -
59. nots ENSDARG00000099824 9 1 1.000 - - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
60. si:dkey-233e3.5 si:dkey-233e3.5 7 1 1.000 - - - - - - - -
61. APEH ENSDARG00000008703 73 1 1.000 - - - - - - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
62. zgc:171626 zgc:171626 42 1 1.000 - - - - - - - -
63. si:dkey-220a11.6 si:dkey-220a11.6 0 1 1.000 - - - - - - - -
64. zgc:172053 ENSDARG00000038321 9 1 1.000 - - - - - - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
65. sdr42e1 ENSDARG00000098838 25 1 1.000 - - - - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
66. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 1.000 - - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
67. cxxc4 ENSDARG00000077817 197 1 1.000 - - - - - - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
68. wisp1a ENSDARG00000054331 26 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
69. zgc:113209 ENSDARG00000100294 176 1 1.000 - - - - - - - - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
70. tekt1 ENSDARG00000101331 27 1 1.000 - - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
71. zgc:158846 ENSDARG00000058462, ENSDARG00000113282 161 1 1.000 - - - - - - - - zgc:158846 [Source:ZFIN;Acc:ZDB-GENE-070209-50]
72. si:dkey-47k20.6 si:dkey-47k20.6 2 1 1.000 - - - - - - - -
73. tmem179b ENSDARG00000069495 17 1 1.000 - - - - - - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
74. gcshb ENSDARG00000105187 182 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
75. wisp1b ENSDARG00000076685 38 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1b [Source:ZFIN;Acc:ZDB-GENE-080220-16]
76. syce2 ENSDARG00000103187 12 1 1.000 - - - - - - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
77. zgc:110434 21 1 1.000 - - - - - - - - zgc:110434
78. si:rp71-1f1.4 ENSDARG00000092476 11 1 1.000 - - - - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
79. CCDC74B CCDC74B 8 1 1.000 - - - - - - - -
80. si:ch211-268b13.3 si:ch211-268b13.3 28 1 1.000 - - - - - - - -
81. slc44a5a ENSDARG00000017398 5 1 1.000 - - - - - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
82. cnfn ENSDARG00000041115 21 1 1.000 - - - - - - - - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
83. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1 1.000 - - - - - - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
84. si:ch211-222k6.3 ENSDARG00000071578 127 1 - - - - - - 1.000 - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
85. zgc:153151 ENSDARG00000069563 126 1 1.000 - - - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
86. zswim7 ENSDARG00000067608 179 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
87. QDPR QDPR 11 1 1.000 - - - - - - - -
88. opcml ENSDARG00000013005 18 1 1.000 - - - - - - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
89. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1 1.000 - - - - - - - -
90. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
91. CR936465.1 CR936465.1 7 1 1.000 - - - - - - - -
92. DNAI2 DNAI2 6 1 1.000 - - - - - - - -
93. hspbap1 ENSDARG00000033771 41 1 1.000 - - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
94. scospondin ENSDARG00000067859 4 1 1.000 - - - - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
95. pdia2 ENSDARG00000018263 74 1 1.000 - - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
96. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
97. PCBP3 ENSDARG00000054378 17 1 1.000 - - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
98. ACTN4_2 ACTN4_2 1 1 1.000 - - - - - - - -
99. foxl2 61 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
100. MIER3 MIER3 114 1 1.000 - - - - - - - -

There are 1089 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA